RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 SLC24A1O60721 1099 aa10.22□□□□□ -0.77
VAT1-209ENST00000592388 CELF2O95319 508 aaKnown RBP10.22□□□□□ -0.77
VAT1-209ENST00000592388 POLR3GLQ9BT43 218 aa10.22□□□□□ -0.77
VAT1-209ENST00000592388 GJA3Q9Y6H8 435 aa10.22□□□□□ -0.77
VAT1-209ENST00000592388 SLX4Q8IY92 1834 aa10.21□□□□□ -0.77
VAT1-209ENST00000592388 HSP90AB1P08238 724 aaKnown RBP10.21□□□□□ -0.77
VAT1-209ENST00000592388 LMOD1P29536 600 aaPredicted RBP10.21□□□□□ -0.77
VAT1-209ENST00000592388 CCDC93Q567U6 631 aa10.21□□□□□ -0.77
VAT1-209ENST00000592388 PRR5LQ6MZQ0 368 aa10.21□□□□□ -0.77
VAT1-209ENST00000592388 GPC2Q8N158 579 aa10.21□□□□□ -0.77
VAT1-209ENST00000592388 NFATC2IPQ8NCF5 419 aa10.21□□□□□ -0.77
VAT1-209ENST00000592388 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.77
VAT1-209ENST00000592388 COL15A1P39059 1388 aa10.21□□□□□ -0.78
VAT1-209ENST00000592388 KIF24Q5T7B8 1368 aa10.21□□□□□ -0.78
VAT1-209ENST00000592388 FZD9O00144 591 aa10.2□□□□□ -0.78
VAT1-209ENST00000592388 COL11A2P13942 1736 aaPredicted RBP10.2□□□□□ -0.78
VAT1-209ENST00000592388 EPS15P42566 896 aa10.2□□□□□ -0.78
VAT1-209ENST00000592388 FKBP4Q02790 459 aaKnown RBP eCLIP10.2□□□□□ -0.78
VAT1-209ENST00000592388 TJP1Q07157 1748 aa10.2□□□□□ -0.78
VAT1-209ENST00000592388 CDCA8Q53HL2 280 aa10.2□□□□□ -0.78
VAT1-209ENST00000592388 TBC1D9BQ66K14 1250 aa10.2□□□□□ -0.78
VAT1-209ENST00000592388 OLFM4Q6UX06 510 aa10.2□□□□□ -0.78
VAT1-209ENST00000592388 ANKRD31Q8N7Z5 1873 aa10.2□□□□□ -0.78
VAT1-209ENST00000592388 ZNF408Q9H9D4 720 aa10.2□□□□□ -0.78
VAT1-209ENST00000592388 ZBTB1Q9Y2K1 713 aa10.2□□□□□ -0.78
VAT1-209ENST00000592388 TRPM7Q96QT4 1865 aa10.19□□□□□ -0.78
VAT1-209ENST00000592388 NPHP1O15259 732 aa10.19□□□□□ -0.78
VAT1-209ENST00000592388 NOGQ13253 232 aa10.19□□□□□ -0.78
VAT1-209ENST00000592388 STYK1Q6J9G0 422 aa10.19□□□□□ -0.78
VAT1-209ENST00000592388 CTU1Q7Z7A3 348 aaKnown RBP10.19□□□□□ -0.78
VAT1-209ENST00000592388 MASTLQ96GX5 879 aa10.19□□□□□ -0.78
VAT1-209ENST00000592388 CACNA1SQ13698 1873 aa10.19□□□□□ -0.78
VAT1-209ENST00000592388 CLSPNQ9HAW4 1339 aa10.18□□□□□ -0.78
VAT1-209ENST00000592388 TRPA1O75762 1119 aa10.18□□□□□ -0.78
VAT1-209ENST00000592388 SRGNP10124 158 aa10.18□□□□□ -0.78
VAT1-209ENST00000592388 CYP19A1P11511 503 aaPredicted RBP10.18□□□□□ -0.78
VAT1-209ENST00000592388 CANXP27824 592 aaKnown RBP10.18□□□□□ -0.78
VAT1-209ENST00000592388 IARSP41252 1262 aaKnown RBP10.18□□□□□ -0.78
VAT1-209ENST00000592388 MTHFSP49914 203 aa10.18□□□□□ -0.78
VAT1-209ENST00000592388 ZNF530Q6P9A1 599 aaPredicted RBP10.18□□□□□ -0.78
VAT1-209ENST00000592388 C7orf43Q8WVR3 580 aa10.18□□□□□ -0.78
VAT1-209ENST00000592388 HHIPL1Q96JK4 782 aa10.18□□□□□ -0.78
VAT1-209ENST00000592388 SCN11AQ9UI33 1791 aa10.17□□□□□ -0.78
VAT1-209ENST00000592388 SCNN1DP51172 638 aa10.17□□□□□ -0.78
VAT1-209ENST00000592388 EIF6P56537 245 aaKnown RBP10.17□□□□□ -0.78
VAT1-209ENST00000592388 AKAP4Q5JQC9 854 aa10.17□□□□□ -0.78
VAT1-209ENST00000592388 USP50Q70EL3 339 aaPredicted RBP10.17□□□□□ -0.78
VAT1-209ENST00000592388 SYNE4Q8N205 404 aa10.17□□□□□ -0.78
VAT1-209ENST00000592388 SLC17A8Q8NDX2 589 aa10.17□□□□□ -0.78
VAT1-209ENST00000592388 GLIS2Q9BZE0 524 aaPredicted RBP10.17□□□□□ -0.78
VAT1-209ENST00000592388 SZT2Q5T011 3432 aa10.16□□□□□ -0.78
VAT1-209ENST00000592388 HSPA5P11021 654 aaKnown RBP10.16□□□□□ -0.78
VAT1-209ENST00000592388 TNNT2P45379 298 aaPredicted RBP10.16□□□□□ -0.78
VAT1-209ENST00000592388 PLEKHO1Q53GL0 409 aaPredicted RBP10.16□□□□□ -0.78
VAT1-209ENST00000592388 CNBD1Q8NA66 436 aa10.16□□□□□ -0.78
VAT1-209ENST00000592388 JDP2Q8WYK2 163 aa10.16□□□□□ -0.78
VAT1-209ENST00000592388 RNF186Q9NXI6 227 aa10.16□□□□□ -0.78
VAT1-209ENST00000592388 SAGE1Q9NXZ1 904 aa10.16□□□□□ -0.78
VAT1-209ENST00000592388 MKI67P46013 3256 aaKnown RBP10.16□□□□□ -0.78
VAT1-209ENST00000592388 WASHC2AQ641Q2 1341 aa10.15□□□□□ -0.78
VAT1-209ENST00000592388 HUNKP57058 714 aa10.15□□□□□ -0.78
VAT1-209ENST00000592388 ST5P78524 1137 aa10.15□□□□□ -0.78
VAT1-209ENST00000592388 RTKN2Q8IZC4 609 aa10.15□□□□□ -0.78
VAT1-209ENST00000592388 TIMELESSQ9UNS1 1208 aa10.15□□□□□ -0.78
VAT1-209ENST00000592388 KIF23Q02241 960 aaPredicted RBP10.14□□□□□ -0.79
VAT1-209ENST00000592388 SLC39A6Q13433 755 aa10.14□□□□□ -0.79
VAT1-209ENST00000592388 C1orf141Q5JVX7 400 aa10.14□□□□□ -0.79
VAT1-209ENST00000592388 POLKQ9UBT6 870 aa10.14□□□□□ -0.79
VAT1-209ENST00000592388 TBC1D2BQ9UPU7 963 aa10.14□□□□□ -0.79
VAT1-209ENST00000592388 ZNF330Q9Y3S2 320 aaPredicted RBP10.14□□□□□ -0.79
VAT1-209ENST00000592388 EIF4G2P78344 907 aaKnown RBP eCLIP10.13□□□□□ -0.79
VAT1-209ENST00000592388 EIF4A2Q14240 407 aaKnown RBP10.13□□□□□ -0.79
VAT1-209ENST00000592388 CCER1Q8TC90 406 aaPredicted RBP10.13□□□□□ -0.79
VAT1-209ENST00000592388 SETDB2Q96T68 719 aa10.13□□□□□ -0.79
VAT1-209ENST00000592388 A0A087WZG4 1122 aa10.12□□□□□ -0.79
VAT1-209ENST00000592388 FAM155AB1AL88 458 aaPredicted RBP10.12□□□□□ -0.79
VAT1-209ENST00000592388 EIF5P55010 431 aaKnown RBP10.12□□□□□ -0.79
VAT1-209ENST00000592388 AMOTQ4VCS5 1084 aa10.12□□□□□ -0.79
VAT1-209ENST00000592388 PANK3Q9H999 370 aa10.12□□□□□ -0.79
VAT1-209ENST00000592388 ADARB2Q9NS39 739 aaKnown RBP10.12□□□□□ -0.79
VAT1-209ENST00000592388 HDAC9Q9UKV0 1011 aa10.12□□□□□ -0.79
VAT1-209ENST00000592388 COLQQ9Y215 455 aaPredicted RBP10.12□□□□□ -0.79
VAT1-209ENST00000592388 ARFGEF2Q9Y6D5 1785 aa10.11□□□□□ -0.79
VAT1-209ENST00000592388 NPR1P16066 1061 aa10.11□□□□□ -0.79
VAT1-209ENST00000592388 PKN2Q16513 984 aaKnown RBP10.11□□□□□ -0.79
VAT1-209ENST00000592388 RGMBQ6NW40 437 aa10.11□□□□□ -0.79
VAT1-209ENST00000592388 DLK2Q6UY11 383 aa10.11□□□□□ -0.79
VAT1-209ENST00000592388 COL4A5P29400 1685 aa10.1□□□□□ -0.79
VAT1-209ENST00000592388 LARGE2Q8N3Y3 721 aa10.1□□□□□ -0.79
VAT1-209ENST00000592388 CSRNP1Q96S65 589 aa10.1□□□□□ -0.79
VAT1-209ENST00000592388 GPRC5DQ9NZD1 345 aa10.1□□□□□ -0.79
VAT1-209ENST00000592388 CUL9Q8IWT3 2517 aa10.09□□□□□ -0.79
VAT1-209ENST00000592388 ZNF157P51786 506 aaPredicted RBP10.09□□□□□ -0.79
VAT1-209ENST00000592388 CDC37L1Q7L3B6 337 aa10.09□□□□□ -0.79
VAT1-209ENST00000592388 USP48Q86UV5 1035 aa10.09□□□□□ -0.79
VAT1-209ENST00000592388 AEBP1Q8IUX7 1158 aa10.09□□□□□ -0.79
VAT1-209ENST00000592388 CCDC102AQ96A19 550 aa10.09□□□□□ -0.79
VAT1-209ENST00000592388 PSMD1Q99460 953 aa10.09□□□□□ -0.79
VAT1-209ENST00000592388 TRIOBPQ9H2D6 2365 aa10.09□□□□□ -0.79
VAT1-209ENST00000592388 POTEFA5A3E0 1075 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms