RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 ERBB4Q15303 1308 aa12.87□□□□□ -0.35
SMARCA4-218ENST00000592158 EPS15P42566 896 aa12.86□□□□□ -0.35
SMARCA4-218ENST00000592158 NFIXQ14938 502 aa12.86□□□□□ -0.35
SMARCA4-218ENST00000592158 LRCH3Q96II8 777 aa12.86□□□□□ -0.35
SMARCA4-218ENST00000592158 GLIS2Q9BZE0 524 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-218ENST00000592158 LAMB4A4D0S4 1761 aa12.86□□□□□ -0.35
SMARCA4-218ENST00000592158 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
SMARCA4-218ENST00000592158 FZD9O00144 591 aa12.85□□□□□ -0.35
SMARCA4-218ENST00000592158 SOX1O00570 391 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-218ENST00000592158 SOGA3Q5TF21 947 aa12.85□□□□□ -0.35
SMARCA4-218ENST00000592158 USPL1Q5W0Q7 1092 aa12.85□□□□□ -0.35
SMARCA4-218ENST00000592158 RGMBQ6NW40 437 aa12.85□□□□□ -0.35
SMARCA4-218ENST00000592158 CSRNP1Q96S65 589 aa12.85□□□□□ -0.35
SMARCA4-218ENST00000592158 MPHOSPH9Q99550 1183 aa12.85□□□□□ -0.35
SMARCA4-218ENST00000592158 ZNF277Q9NRM2 450 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-218ENST00000592158 GJA3Q9Y6H8 435 aa12.85□□□□□ -0.35
SMARCA4-218ENST00000592158 HOXC9P31274 260 aa12.84□□□□□ -0.35
SMARCA4-218ENST00000592158 NKX1-1Q15270 411 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-218ENST00000592158 DCAF11Q8TEB1 546 aa12.84□□□□□ -0.35
SMARCA4-218ENST00000592158 CCDC102AQ96A19 550 aa12.84□□□□□ -0.35
SMARCA4-218ENST00000592158 MON2Q7Z3U7 1717 aa12.84□□□□□ -0.35
SMARCA4-218ENST00000592158 ANKRD31Q8N7Z5 1873 aa12.84□□□□□ -0.35
SMARCA4-218ENST00000592158 COL11A2P13942 1736 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-218ENST00000592158 ZPR1O75312 459 aa12.83□□□□□ -0.36
SMARCA4-218ENST00000592158 SCNN1DP51172 638 aa12.83□□□□□ -0.36
SMARCA4-218ENST00000592158 ANKRD13DQ6ZTN6 518 aa12.82□□□□□ -0.36
SMARCA4-218ENST00000592158 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
SMARCA4-218ENST00000592158 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-218ENST00000592158 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-218ENST00000592158 FKBP4Q02790 459 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMARCA4-218ENST00000592158 PRPF40BQ6NWY9 871 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-218ENST00000592158 CNKSR1Q969H4 720 aa12.81□□□□□ -0.36
SMARCA4-218ENST00000592158 PRO3102Q9H379 93 aa12.81□□□□□ -0.36
SMARCA4-218ENST00000592158 TTC28Q96AY4 2481 aa12.81□□□□□ -0.36
SMARCA4-218ENST00000592158 TBC1D8O95759 1140 aa12.8□□□□□ -0.36
SMARCA4-218ENST00000592158 PDE6BP35913 854 aa12.8□□□□□ -0.36
SMARCA4-218ENST00000592158 AMPHP49418 695 aa12.8□□□□□ -0.36
SMARCA4-218ENST00000592158 ZNF157P51786 506 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-218ENST00000592158 CCDC93Q567U6 631 aa12.8□□□□□ -0.36
SMARCA4-218ENST00000592158 DEFB123Q8N688 67 aa12.79□□□□□ -0.36
SMARCA4-218ENST00000592158 BCORQ6W2J9 1755 aa12.79□□□□□ -0.36
SMARCA4-218ENST00000592158 ARFGEF2Q9Y6D5 1785 aa12.79□□□□□ -0.36
SMARCA4-218ENST00000592158 EIF6P56537 245 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-218ENST00000592158 GPR25O00155 361 aa12.77□□□□□ -0.37
SMARCA4-218ENST00000592158 IARSP41252 1262 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-218ENST00000592158 Q7L0L9 218 aa12.77□□□□□ -0.37
SMARCA4-218ENST00000592158 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-218ENST00000592158 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.37
SMARCA4-218ENST00000592158 SLC10A3P09131 477 aa12.76□□□□□ -0.37
SMARCA4-218ENST00000592158 ADARB2Q9NS39 739 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-218ENST00000592158 MUC3AQ02505 3323 aa12.75□□□□□ -0.37
SMARCA4-218ENST00000592158 STYK1Q6J9G0 422 aa12.75□□□□□ -0.37
SMARCA4-218ENST00000592158 CDC37L1Q7L3B6 337 aa12.75□□□□□ -0.37
SMARCA4-218ENST00000592158 EVC2Q86UK5 1308 aa12.75□□□□□ -0.37
SMARCA4-218ENST00000592158 C7orf43Q8WVR3 580 aa12.75□□□□□ -0.37
SMARCA4-218ENST00000592158 JDP2Q8WYK2 163 aa12.75□□□□□ -0.37
SMARCA4-218ENST00000592158 STAC3Q96MF2 364 aa12.75□□□□□ -0.37
SMARCA4-218ENST00000592158 SBNO2Q9Y2G9 1366 aa12.74□□□□□ -0.37
SMARCA4-218ENST00000592158 A0A1W2PPC1 479 aa12.74□□□□□ -0.37
SMARCA4-218ENST00000592158 NOM1Q5C9Z4 860 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-218ENST00000592158 PGAP2Q9UHJ9 254 aa12.74□□□□□ -0.37
SMARCA4-218ENST00000592158 FKTNO75072 461 aa12.73□□□□□ -0.37
SMARCA4-218ENST00000592158 FBLN1P23142 703 aa12.73□□□□□ -0.37
SMARCA4-218ENST00000592158 GPR153Q6NV75 609 aa12.73□□□□□ -0.37
SMARCA4-218ENST00000592158 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
SMARCA4-218ENST00000592158 DPF3Q92784 378 aa12.73□□□□□ -0.37
SMARCA4-218ENST00000592158 TMEM106CQ9BVX2 250 aa12.73□□□□□ -0.37
SMARCA4-218ENST00000592158 BCL2L12Q9HB09 334 aa12.73□□□□□ -0.37
SMARCA4-218ENST00000592158 GBA2Q9HCG7 927 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-218ENST00000592158 MTMR10Q9NXD2 777 aa12.73□□□□□ -0.37
SMARCA4-218ENST00000592158 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
SMARCA4-218ENST00000592158 SRGNP10124 158 aa12.72□□□□□ -0.37
SMARCA4-218ENST00000592158 INTS5Q6P9B9 1019 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-218ENST00000592158 DLK2Q6UY11 383 aa12.72□□□□□ -0.37
SMARCA4-218ENST00000592158 TRIM17Q9Y577 477 aa12.72□□□□□ -0.37
SMARCA4-218ENST00000592158 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
SMARCA4-218ENST00000592158 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
SMARCA4-218ENST00000592158 MASTLQ96GX5 879 aa12.71□□□□□ -0.37
SMARCA4-218ENST00000592158 SPG7Q9UQ90 795 aa12.71□□□□□ -0.37
SMARCA4-218ENST00000592158 EYSQ5T1H1 3165 aa12.71□□□□□ -0.38
SMARCA4-218ENST00000592158 LAMA2P24043 3122 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-218ENST00000592158 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
SMARCA4-218ENST00000592158 TMEM265A0A087WTH1 108 aa12.7□□□□□ -0.38
SMARCA4-218ENST00000592158 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-218ENST00000592158 RTKN2Q8IZC4 609 aa12.7□□□□□ -0.38
SMARCA4-218ENST00000592158 ARMC5Q96C12 935 aa12.7□□□□□ -0.38
SMARCA4-218ENST00000592158 GPRC5DQ9NZD1 345 aa12.7□□□□□ -0.38
SMARCA4-218ENST00000592158 SOS1Q07889 1333 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-218ENST00000592158 PRR5LQ6MZQ0 368 aa12.69□□□□□ -0.38
SMARCA4-218ENST00000592158 OTOP1Q7RTM1 612 aa12.69□□□□□ -0.38
SMARCA4-218ENST00000592158 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
SMARCA4-218ENST00000592158 COL4A5P29400 1685 aa12.69□□□□□ -0.38
SMARCA4-218ENST00000592158 MAP3K12Q12852 859 aa12.68□□□□□ -0.38
SMARCA4-218ENST00000592158 PIEZO1Q92508 2521 aa12.68□□□□□ -0.38
SMARCA4-218ENST00000592158 TJP1Q07157 1748 aa12.68□□□□□ -0.38
SMARCA4-218ENST00000592158 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
SMARCA4-218ENST00000592158 SYNGAP1Q96PV0 1343 aa12.67□□□□□ -0.38
SMARCA4-218ENST00000592158 PHKG2P15735 406 aa12.67□□□□□ -0.38
SMARCA4-218ENST00000592158 RASAL3Q86YV0 1011 aa12.67□□□□□ -0.38
SMARCA4-218ENST00000592158 IFNL2Q8IZJ0 200 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms