RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 ANP32CO43423 234 aa19.87■□□□□ 0.77
ERCC1-213ENST00000592023 CLEC4GQ6UXB4 293 aa19.87■□□□□ 0.77
ERCC1-213ENST00000592023 ERBB4Q15303 1308 aa19.86■□□□□ 0.77
ERCC1-213ENST00000592023 EIF2S2P20042 333 aaKnown RBP19.86■□□□□ 0.77
ERCC1-213ENST00000592023 ST5P78524 1137 aa19.86■□□□□ 0.77
ERCC1-213ENST00000592023 HLFQ16534 295 aa19.86■□□□□ 0.77
ERCC1-213ENST00000592023 KIF6Q6ZMV9 814 aa19.86■□□□□ 0.77
ERCC1-213ENST00000592023 NIP7Q9Y221 180 aaKnown RBP eCLIP19.86■□□□□ 0.77
ERCC1-213ENST00000592023 H0YIN7 160 aa19.85■□□□□ 0.77
ERCC1-213ENST00000592023 CHL1O00533 1208 aa19.85■□□□□ 0.77
ERCC1-213ENST00000592023 KRT24Q2M2I5 525 aa19.85■□□□□ 0.77
ERCC1-213ENST00000592023 TTLL7Q6ZT98 887 aa19.85■□□□□ 0.77
ERCC1-213ENST00000592023 NBPF5PQ86XG9 351 aaPredicted RBP19.85■□□□□ 0.77
ERCC1-213ENST00000592023 NUP98P52948 1817 aa19.85■□□□□ 0.77
ERCC1-213ENST00000592023 CACNA1SQ13698 1873 aa19.84■□□□□ 0.77
ERCC1-213ENST00000592023 MAP3K15Q6ZN16 1313 aa19.84■□□□□ 0.77
ERCC1-213ENST00000592023 RGL2O15211 777 aa19.84■□□□□ 0.77
ERCC1-213ENST00000592023 PDE6BP35913 854 aa19.84■□□□□ 0.77
ERCC1-213ENST00000592023 NECTIN2Q92692 538 aa19.84■□□□□ 0.77
ERCC1-213ENST00000592023 BRIP1Q9BX63 1249 aa19.84■□□□□ 0.77
ERCC1-213ENST00000592023 ZBTB3Q9H5J0 574 aa19.84■□□□□ 0.77
ERCC1-213ENST00000592023 MRS2Q9HD23 443 aa19.84■□□□□ 0.77
ERCC1-213ENST00000592023 FAM177BA6PVY3 158 aa19.83■□□□□ 0.77
ERCC1-213ENST00000592023 ANXA1P04083 346 aa19.83■□□□□ 0.77
ERCC1-213ENST00000592023 ZNF526Q8TF50 670 aaPredicted RBP19.83■□□□□ 0.77
ERCC1-213ENST00000592023 PROSER3Q2NL68 480 aa19.82■□□□□ 0.76
ERCC1-213ENST00000592023 TTLL6Q8N841 843 aa19.82■□□□□ 0.76
ERCC1-213ENST00000592023 ZNF622Q969S3 477 aaKnown RBP eCLIP19.82■□□□□ 0.76
ERCC1-213ENST00000592023 TNRC6CQ9HCJ0 1690 aaKnown RBP19.81■□□□□ 0.76
ERCC1-213ENST00000592023 SENP3-EIF4A1A0A087X0R7 540 aa19.81■□□□□ 0.76
ERCC1-213ENST00000592023 ERVV-1B6SEH8 477 aa19.81■□□□□ 0.76
ERCC1-213ENST00000592023 PDIA6Q15084 440 aa19.81■□□□□ 0.76
ERCC1-213ENST00000592023 CFAP44Q96MT7 982 aa19.81■□□□□ 0.76
ERCC1-213ENST00000592023 ARFGEF2Q9Y6D5 1785 aa19.8■□□□□ 0.76
ERCC1-213ENST00000592023 LRP10Q7Z4F1 713 aa19.8■□□□□ 0.76
ERCC1-213ENST00000592023 MBIPQ9NS73 344 aa19.8■□□□□ 0.76
ERCC1-213ENST00000592023 PDZRN3Q9UPQ7 1066 aa19.8■□□□□ 0.76
ERCC1-213ENST00000592023 GPTP24298 496 aa19.79■□□□□ 0.76
ERCC1-213ENST00000592023 RASSF7Q02833 373 aa19.79■□□□□ 0.76
ERCC1-213ENST00000592023 GPBP1L1Q9HC44 474 aaPredicted RBP19.79■□□□□ 0.76
ERCC1-213ENST00000592023 ANKRD36CQ5JPF3 1778 aa19.79■□□□□ 0.76
ERCC1-213ENST00000592023 CALD1Q05682 793 aaKnown RBP19.78■□□□□ 0.76
ERCC1-213ENST00000592023 HDGFL1Q5TGJ6 251 aa19.78■□□□□ 0.76
ERCC1-213ENST00000592023 C9orf131Q5VYM1 1079 aa19.78■□□□□ 0.76
ERCC1-213ENST00000592023 TPTE2Q6XPS3 522 aa19.78■□□□□ 0.76
ERCC1-213ENST00000592023 IFT57Q9NWB7 429 aa19.78■□□□□ 0.76
ERCC1-213ENST00000592023 ABCC12Q96J65 1359 aa19.78■□□□□ 0.76
ERCC1-213ENST00000592023 UBN2Q6ZU65 1347 aa19.77■□□□□ 0.76
ERCC1-213ENST00000592023 RNF181Q9P0P0 153 aa19.77■□□□□ 0.76
ERCC1-213ENST00000592023 ZNF219Q9P2Y4 722 aaPredicted RBP19.77■□□□□ 0.76
ERCC1-213ENST00000592023 SBF1O95248 1867 aa19.77■□□□□ 0.76
ERCC1-213ENST00000592023 ZNF853P0CG23 659 aa19.76■□□□□ 0.75
ERCC1-213ENST00000592023 SRGNP10124 158 aa19.76■□□□□ 0.75
ERCC1-213ENST00000592023 GTF2E1P29083 439 aaPredicted RBP19.76■□□□□ 0.75
ERCC1-213ENST00000592023 GNAI1P63096 354 aa19.76■□□□□ 0.75
ERCC1-213ENST00000592023 AIMP1Q12904 312 aaKnown RBP19.76■□□□□ 0.75
ERCC1-213ENST00000592023 GIGYF2Q6Y7W6 1299 aaKnown RBP19.76■□□□□ 0.75
ERCC1-213ENST00000592023 XAGE3Q8WTP9 111 aa19.76■□□□□ 0.75
ERCC1-213ENST00000592023 CHPF2Q9P2E5 772 aa19.76■□□□□ 0.75
ERCC1-213ENST00000592023 SLX4Q8IY92 1834 aa19.76■□□□□ 0.75
ERCC1-213ENST00000592023 TIAM2Q8IVF5 1701 aa19.76■□□□□ 0.75
ERCC1-213ENST00000592023 IBTKQ9P2D0 1353 aaPredicted RBP19.75■□□□□ 0.75
ERCC1-213ENST00000592023 HOXB7P09629 217 aa19.75■□□□□ 0.75
ERCC1-213ENST00000592023 DUSP27Q5VZP5 1158 aa19.75■□□□□ 0.75
ERCC1-213ENST00000592023 STYK1Q6J9G0 422 aa19.75■□□□□ 0.75
ERCC1-213ENST00000592023 NUTM1Q86Y26 1132 aa19.75■□□□□ 0.75
ERCC1-213ENST00000592023 MASTLQ96GX5 879 aa19.75■□□□□ 0.75
ERCC1-213ENST00000592023 NYXQ9GZU5 481 aa19.75■□□□□ 0.75
ERCC1-213ENST00000592023 DDX21Q9NR30 783 aaKnown RBP eCLIP19.75■□□□□ 0.75
ERCC1-213ENST00000592023 C21orf2O43822 256 aa19.74■□□□□ 0.75
ERCC1-213ENST00000592023 PRPF40BQ6NWY9 871 aaKnown RBP19.74■□□□□ 0.75
ERCC1-213ENST00000592023 COPS6Q7L5N1 327 aa19.74■□□□□ 0.75
ERCC1-213ENST00000592023 CNKSR1Q969H4 720 aa19.74■□□□□ 0.75
ERCC1-213ENST00000592023 SUSD4Q5VX71 490 aa19.73■□□□□ 0.75
ERCC1-213ENST00000592023 ZNF34Q8IZ26 560 aa19.73■□□□□ 0.75
ERCC1-213ENST00000592023 FER1L6Q2WGJ9 1857 aa19.73■□□□□ 0.75
ERCC1-213ENST00000592023 NFKBIEO00221 500 aa19.72■□□□□ 0.75
ERCC1-213ENST00000592023 C1QTNF8P60827 252 aa19.72■□□□□ 0.75
ERCC1-213ENST00000592023 ERFEQ4G0M1 354 aa19.72■□□□□ 0.75
ERCC1-213ENST00000592023 RIC1Q4ADV7 1423 aa19.71■□□□□ 0.75
ERCC1-213ENST00000592023 ELL2O00472 640 aaPredicted RBP19.71■□□□□ 0.75
ERCC1-213ENST00000592023 NTSR2O95665 410 aa19.71■□□□□ 0.75
ERCC1-213ENST00000592023 NPR1P16066 1061 aa19.71■□□□□ 0.75
ERCC1-213ENST00000592023 CCDC88AQ3V6T2 1871 aa19.71■□□□□ 0.75
ERCC1-213ENST00000592023 KLRG2A4D1S0 409 aaPredicted RBP19.7■□□□□ 0.74
ERCC1-213ENST00000592023 PRELPP51888 382 aa19.7■□□□□ 0.74
ERCC1-213ENST00000592023 PARP10Q53GL7 1025 aa19.7■□□□□ 0.74
ERCC1-213ENST00000592023 DBF4Q9UBU7 674 aaPredicted RBP19.7■□□□□ 0.74
ERCC1-213ENST00000592023 LMNB1P20700 586 aa19.69■□□□□ 0.74
ERCC1-213ENST00000592023 CCDC27Q2M243 656 aa19.69■□□□□ 0.74
ERCC1-213ENST00000592023 HSP90AB3PQ58FF7 597 aa19.69■□□□□ 0.74
ERCC1-213ENST00000592023 PPP1R42Q7Z4L9 355 aa19.69■□□□□ 0.74
ERCC1-213ENST00000592023 WWC1Q8IX03 1113 aa19.69■□□□□ 0.74
ERCC1-213ENST00000592023 TSR2Q969E8 191 aaKnown RBP19.69■□□□□ 0.74
ERCC1-213ENST00000592023 C8orf58Q8NAV2 365 aa19.68■□□□□ 0.74
ERCC1-213ENST00000592023 CRY2Q49AN0 593 aa19.67■□□□□ 0.74
ERCC1-213ENST00000592023 FAM9BQ8IZU0 186 aa19.67■□□□□ 0.74
ERCC1-213ENST00000592023 TAOK3Q9H2K8 898 aa19.67■□□□□ 0.74
ERCC1-213ENST00000592023 SALL2Q9Y467 1007 aaPredicted RBP19.67■□□□□ 0.74
ERCC1-213ENST00000592023 LAMB2P55268 1798 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms