RNA–Protein interactions for RNA: ENST00000591960.1

RDH13-219, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 1,328 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-219ENST00000591960 HLFQ16534 295 aa17.75■□□□□ 0.43
RDH13-219ENST00000591960 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
RDH13-219ENST00000591960 CLEC4GQ6UXB4 293 aa17.75■□□□□ 0.43
RDH13-219ENST00000591960 NECTIN2Q92692 538 aa17.75■□□□□ 0.43
RDH13-219ENST00000591960 ANKRD31Q8N7Z5 1873 aa17.75■□□□□ 0.43
RDH13-219ENST00000591960 RGL2O15211 777 aa17.74■□□□□ 0.43
RDH13-219ENST00000591960 CHD4Q14839 1912 aa17.74■□□□□ 0.43
RDH13-219ENST00000591960 HOXB7P09629 217 aa17.73■□□□□ 0.43
RDH13-219ENST00000591960 DUSP27Q5VZP5 1158 aa17.73■□□□□ 0.43
RDH13-219ENST00000591960 SETDB2Q96T68 719 aa17.73■□□□□ 0.43
RDH13-219ENST00000591960 MAP3K15Q6ZN16 1313 aa17.73■□□□□ 0.43
RDH13-219ENST00000591960 CHRNA5P30532 468 aa17.72■□□□□ 0.43
RDH13-219ENST00000591960 PRR5LQ6MZQ0 368 aa17.72■□□□□ 0.43
RDH13-219ENST00000591960 ZNF652Q9Y2D9 606 aa17.72■□□□□ 0.43
RDH13-219ENST00000591960 SALL2Q9Y467 1007 aaPredicted RBP17.72■□□□□ 0.43
RDH13-219ENST00000591960 DLEC1Q9Y238 1755 aa17.72■□□□□ 0.43
RDH13-219ENST00000591960 ERVV-1B6SEH8 477 aa17.72■□□□□ 0.43
RDH13-219ENST00000591960 HDGFL1Q5TGJ6 251 aa17.72■□□□□ 0.43
RDH13-219ENST00000591960 CCDC24Q8N4L8 307 aa17.72■□□□□ 0.43
RDH13-219ENST00000591960 C8orf58Q8NAV2 365 aa17.72■□□□□ 0.43
RDH13-219ENST00000591960 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
RDH13-219ENST00000591960 KIF6Q6ZMV9 814 aa17.71■□□□□ 0.42
RDH13-219ENST00000591960 ZBTB3Q9H5J0 574 aa17.71■□□□□ 0.42
RDH13-219ENST00000591960 DDX21Q9NR30 783 aaKnown RBP eCLIP17.71■□□□□ 0.42
RDH13-219ENST00000591960 CHPF2Q9P2E5 772 aa17.71■□□□□ 0.42
RDH13-219ENST00000591960 COL11A2P13942 1736 aaPredicted RBP17.7■□□□□ 0.42
RDH13-219ENST00000591960 ATP10DQ9P241 1426 aa17.7■□□□□ 0.42
RDH13-219ENST00000591960 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
RDH13-219ENST00000591960 GRIN3BO60391 1043 aa17.7■□□□□ 0.42
RDH13-219ENST00000591960 NIP7Q9Y221 180 aaKnown RBP eCLIP17.7■□□□□ 0.42
RDH13-219ENST00000591960 IL16Q14005 1332 aa17.69■□□□□ 0.42
RDH13-219ENST00000591960 ARFGEF1Q9Y6D6 1849 aa17.69■□□□□ 0.42
RDH13-219ENST00000591960 YY1P25490 414 aa17.69■□□□□ 0.42
RDH13-219ENST00000591960 COPS6Q7L5N1 327 aa17.69■□□□□ 0.42
RDH13-219ENST00000591960 TSPYL6Q8N831 410 aa17.69■□□□□ 0.42
RDH13-219ENST00000591960 CNBD1Q8NA66 436 aa17.69■□□□□ 0.42
RDH13-219ENST00000591960 XAGE3Q8WTP9 111 aa17.69■□□□□ 0.42
RDH13-219ENST00000591960 CCER2I3L3R5 266 aa17.68■□□□□ 0.42
RDH13-219ENST00000591960 GIGYF2Q6Y7W6 1299 aaKnown RBP17.68■□□□□ 0.42
RDH13-219ENST00000591960 BCS1LQ9Y276 419 aa17.68■□□□□ 0.42
RDH13-219ENST00000591960 AIMP1Q12904 312 aaKnown RBP17.67■□□□□ 0.42
RDH13-219ENST00000591960 ANKRD36CQ5JPF3 1778 aa17.67■□□□□ 0.42
RDH13-219ENST00000591960 UBN2Q6ZU65 1347 aa17.67■□□□□ 0.42
RDH13-219ENST00000591960 NBPF5PQ86XG9 351 aaPredicted RBP17.67■□□□□ 0.42
RDH13-219ENST00000591960 WDR63Q8IWG1 891 aa17.67■□□□□ 0.42
RDH13-219ENST00000591960 BRIP1Q9BX63 1249 aa17.67■□□□□ 0.42
RDH13-219ENST00000591960 PIM2Q9P1W9 311 aa17.67■□□□□ 0.42
RDH13-219ENST00000591960 DBF4Q9UBU7 674 aaPredicted RBP17.67■□□□□ 0.42
RDH13-219ENST00000591960 FAM177BA6PVY3 158 aa17.66■□□□□ 0.42
RDH13-219ENST00000591960 C2CD5Q86YS7 1000 aa17.66■□□□□ 0.42
RDH13-219ENST00000591960 ZNF34Q8IZ26 560 aa17.66■□□□□ 0.42
RDH13-219ENST00000591960 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
RDH13-219ENST00000591960 FANCIQ9NVI1 1328 aa17.65■□□□□ 0.42
RDH13-219ENST00000591960 GPTP24298 496 aa17.65■□□□□ 0.42
RDH13-219ENST00000591960 ZNF521Q96K83 1311 aa17.64■□□□□ 0.41
RDH13-219ENST00000591960 PDE6BP35913 854 aa17.64■□□□□ 0.41
RDH13-219ENST00000591960 ST5P78524 1137 aa17.64■□□□□ 0.41
RDH13-219ENST00000591960 DALRD3Q5D0E6 543 aaKnown RBP17.64■□□□□ 0.41
RDH13-219ENST00000591960 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.41
RDH13-219ENST00000591960 TNRC6CQ9HCJ0 1690 aaKnown RBP17.64■□□□□ 0.41
RDH13-219ENST00000591960 H0YIN7 160 aa17.63■□□□□ 0.41
RDH13-219ENST00000591960 NPHP1O15259 732 aa17.63■□□□□ 0.41
RDH13-219ENST00000591960 SUSD4Q5VX71 490 aa17.63■□□□□ 0.41
RDH13-219ENST00000591960 TPTE2Q6XPS3 522 aa17.63■□□□□ 0.41
RDH13-219ENST00000591960 HYPKQ9NX55 129 aa17.63■□□□□ 0.41
RDH13-219ENST00000591960 ARFGEF2Q9Y6D5 1785 aa17.63■□□□□ 0.41
RDH13-219ENST00000591960 ABCC12Q96J65 1359 aa17.62■□□□□ 0.41
RDH13-219ENST00000591960 IBTKQ9P2D0 1353 aaPredicted RBP17.62■□□□□ 0.41
RDH13-219ENST00000591960 NUTM1Q86Y26 1132 aa17.62■□□□□ 0.41
RDH13-219ENST00000591960 PHAXQ9H814 394 aaKnown RBP17.62■□□□□ 0.41
RDH13-219ENST00000591960 CACNA1SQ13698 1873 aa17.61■□□□□ 0.41
RDH13-219ENST00000591960 KLRG2A4D1S0 409 aaPredicted RBP17.61■□□□□ 0.41
RDH13-219ENST00000591960 NTSR2O95665 410 aa17.61■□□□□ 0.41
RDH13-219ENST00000591960 SRGNP10124 158 aa17.61■□□□□ 0.41
RDH13-219ENST00000591960 TWISTNBQ3B726 338 aaPredicted RBP17.61■□□□□ 0.41
RDH13-219ENST00000591960 MIER1Q8N108 512 aa17.61■□□□□ 0.41
RDH13-219ENST00000591960 PLBD2Q8NHP8 589 aa17.61■□□□□ 0.41
RDH13-219ENST00000591960 PDZRN3Q9UPQ7 1066 aa17.61■□□□□ 0.41
RDH13-219ENST00000591960 TCIRG1Q13488 830 aa17.6■□□□□ 0.41
RDH13-219ENST00000591960 ERFEQ4G0M1 354 aa17.6■□□□□ 0.41
RDH13-219ENST00000591960 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
RDH13-219ENST00000591960 ANKRD13DQ6ZTN6 518 aa17.6■□□□□ 0.41
RDH13-219ENST00000591960 TTLL6Q8N841 843 aa17.6■□□□□ 0.41
RDH13-219ENST00000591960 NYXQ9GZU5 481 aa17.6■□□□□ 0.41
RDH13-219ENST00000591960 SLX4Q8IY92 1834 aa17.59■□□□□ 0.41
RDH13-219ENST00000591960 EXOSC9Q06265 439 aaKnown RBP17.59■□□□□ 0.41
RDH13-219ENST00000591960 PARP10Q53GL7 1025 aa17.59■□□□□ 0.41
RDH13-219ENST00000591960 ARHGAP27Q6ZUM4 889 aa17.59■□□□□ 0.41
RDH13-219ENST00000591960 ZNF622Q969S3 477 aaKnown RBP eCLIP17.59■□□□□ 0.411e-6■□□□□ 11.2
RDH13-219ENST00000591960 RIC1Q4ADV7 1423 aa17.58■□□□□ 0.4
RDH13-219ENST00000591960 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.4
RDH13-219ENST00000591960 HSP90AB3PQ58FF7 597 aa17.58■□□□□ 0.4
RDH13-219ENST00000591960 NLRP10Q86W26 655 aa17.58■□□□□ 0.4
RDH13-219ENST00000591960 GTF2E1P29083 439 aaPredicted RBP17.57■□□□□ 0.4
RDH13-219ENST00000591960 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
RDH13-219ENST00000591960 STYK1Q6J9G0 422 aa17.57■□□□□ 0.4
RDH13-219ENST00000591960 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
RDH13-219ENST00000591960 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
RDH13-219ENST00000591960 MASTLQ96GX5 879 aa17.57■□□□□ 0.4
RDH13-219ENST00000591960 ADCY9O60503 1353 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms