RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 KRTAP9-6A0A140TA67 174 aa7.64□□□□□ -1.19
NPC1-213ENST00000591955 FURINP09958 794 aa7.64□□□□□ -1.19
NPC1-213ENST00000591955 NFKBIBQ15653 356 aa7.64□□□□□ -1.19
NPC1-213ENST00000591955 KANK4Q5T7N3 995 aaPredicted RBP7.64□□□□□ -1.19
NPC1-213ENST00000591955 MTERF4Q7Z6M4 381 aaKnown RBP7.64□□□□□ -1.19
NPC1-213ENST00000591955 CYLDQ9NQC7 956 aa7.64□□□□□ -1.19
NPC1-213ENST00000591955 FYCO1Q9BQS8 1478 aa7.63□□□□□ -1.19
NPC1-213ENST00000591955 ATP5J2-PTCD1G3V325 749 aa7.63□□□□□ -1.19
NPC1-213ENST00000591955 COL8A1P27658 744 aa7.63□□□□□ -1.19
NPC1-213ENST00000591955 IRX6P78412 446 aaPredicted RBP7.63□□□□□ -1.19
NPC1-213ENST00000591955 FBXO31Q5XUX0 539 aaPredicted RBP7.63□□□□□ -1.19
NPC1-213ENST00000591955 DZIP3Q86Y13 1208 aaKnown RBP7.63□□□□□ -1.19
NPC1-213ENST00000591955 SEPT12Q8IYM1 358 aa7.63□□□□□ -1.19
NPC1-213ENST00000591955 OXCT2Q9BYC2 517 aaPredicted RBP7.63□□□□□ -1.19
NPC1-213ENST00000591955 EFCAB5A4FU69 1503 aa7.62□□□□□ -1.19
NPC1-213ENST00000591955 PLEKHH2Q8IVE3 1493 aa7.62□□□□□ -1.19
NPC1-213ENST00000591955 YEATS2Q9ULM3 1422 aa7.62□□□□□ -1.19
NPC1-213ENST00000591955 PHLDB1Q86UU1 1377 aa7.62□□□□□ -1.19
NPC1-213ENST00000591955 CCDC7Q96M83 1385 aa7.62□□□□□ -1.19
NPC1-213ENST00000591955 SHISA8B8ZZ34 492 aa7.62□□□□□ -1.19
NPC1-213ENST00000591955 TERF1P54274 439 aa7.62□□□□□ -1.19
NPC1-213ENST00000591955 CALD1Q05682 793 aaKnown RBP7.62□□□□□ -1.19
NPC1-213ENST00000591955 GAS2L1Q99501 681 aaPredicted RBP7.62□□□□□ -1.19
NPC1-213ENST00000591955 PDCL3Q9H2J4 239 aa7.62□□□□□ -1.19
NPC1-213ENST00000591955 BRPF3Q9ULD4 1205 aa7.62□□□□□ -1.19
NPC1-213ENST00000591955 MKL2Q9ULH7 1088 aa7.62□□□□□ -1.19
NPC1-213ENST00000591955 ZMYM3Q14202 1370 aa7.61□□□□□ -1.19
NPC1-213ENST00000591955 PTMSP20962 102 aa7.61□□□□□ -1.19
NPC1-213ENST00000591955 MAP2K3P46734 347 aa7.61□□□□□ -1.19
NPC1-213ENST00000591955 POU4F2Q12837 409 aa7.61□□□□□ -1.19
NPC1-213ENST00000591955 BECN1Q14457 450 aa7.61□□□□□ -1.19
NPC1-213ENST00000591955 HECW1Q76N89 1606 aa7.6□□□□□ -1.19
NPC1-213ENST00000591955 LTBP4Q8N2S1 1624 aa7.6□□□□□ -1.19
NPC1-213ENST00000591955 A0A1W2PRU2 124 aa7.6□□□□□ -1.19
NPC1-213ENST00000591955 MEN1O00255 615 aa7.6□□□□□ -1.19
NPC1-213ENST00000591955 NBPF10Q6P3W6 841 aaKnown RBP7.6□□□□□ -1.19
NPC1-213ENST00000591955 C1orf229Q6ZS94 237 aaPredicted RBP7.6□□□□□ -1.19
NPC1-213ENST00000591955 NBPF15Q8N660 670 aa7.6□□□□□ -1.19
NPC1-213ENST00000591955 EPS8L1Q8TE68 723 aa7.6□□□□□ -1.19
NPC1-213ENST00000591955 FRAT1Q92837 279 aaPredicted RBP7.6□□□□□ -1.19
NPC1-213ENST00000591955 NUCKS1Q9H1E3 243 aaKnown RBP7.6□□□□□ -1.19
NPC1-213ENST00000591955 ZFYVE16Q7Z3T8 1539 aa7.6□□□□□ -1.19
NPC1-213ENST00000591955 FANCAO15360 1455 aa7.6□□□□□ -1.19
NPC1-213ENST00000591955 ATP10BO94823 1461 aa7.6□□□□□ -1.19
NPC1-213ENST00000591955 NEO1Q92859 1461 aa7.6□□□□□ -1.19
NPC1-213ENST00000591955 RRP1P56182 461 aaKnown RBP7.59□□□□□ -1.19
NPC1-213ENST00000591955 MLECQ14165 292 aa7.59□□□□□ -1.19
NPC1-213ENST00000591955 WDR44Q5JSH3 913 aa7.59□□□□□ -1.19
NPC1-213ENST00000591955 CFHR5Q9BXR6 569 aa7.59□□□□□ -1.19
NPC1-213ENST00000591955 GRIP2Q9C0E4 1043 aa7.59□□□□□ -1.19
NPC1-213ENST00000591955 LAS1LQ9Y4W2 734 aaKnown RBP7.59□□□□□ -1.19
NPC1-213ENST00000591955 SPATA31C2B4DYI2 1134 aa7.58□□□□□ -1.2
NPC1-213ENST00000591955 PNMA1Q8ND90 353 aa7.58□□□□□ -1.2
NPC1-213ENST00000591955 SIN3AQ96ST3 1273 aa7.58□□□□□ -1.2
NPC1-213ENST00000591955 PTPN23Q9H3S7 1636 aa7.58□□□□□ -1.2
NPC1-213ENST00000591955 BRD4O60885 1362 aaPredicted RBP7.58□□□□□ -1.2
NPC1-213ENST00000591955 ARHGEF12Q9NZN5 1544 aa7.57□□□□□ -1.2
NPC1-213ENST00000591955 RAPGEF6Q8TEU7 1601 aa7.57□□□□□ -1.2
NPC1-213ENST00000591955 F11P03951 625 aa7.57□□□□□ -1.2
NPC1-213ENST00000591955 THBS1P07996 1170 aa7.57□□□□□ -1.2
NPC1-213ENST00000591955 HOXB4P17483 251 aaPredicted RBP7.57□□□□□ -1.2
NPC1-213ENST00000591955 SLC27A3Q5K4L6 730 aa7.57□□□□□ -1.2
NPC1-213ENST00000591955 CENPQQ7L2Z9 268 aaPredicted RBP7.57□□□□□ -1.2
NPC1-213ENST00000591955 KLRG1Q96E93 195 aa7.57□□□□□ -1.2
NPC1-213ENST00000591955 SCAPERQ9BY12 1400 aa7.57□□□□□ -1.2
NPC1-213ENST00000591955 MED1Q15648 1581 aaPredicted RBP7.57□□□□□ -1.2
NPC1-213ENST00000591955 EIF3AQ14152 1382 aaKnown RBP7.57□□□□□ -1.2
NPC1-213ENST00000591955 FGD6Q6ZV73 1430 aa7.56□□□□□ -1.2
NPC1-213ENST00000591955 HSPA5P11021 654 aaKnown RBP7.56□□□□□ -1.2
NPC1-213ENST00000591955 ITGB7P26010 798 aa7.56□□□□□ -1.2
NPC1-213ENST00000591955 CEBPAP49715 358 aaPredicted RBP7.56□□□□□ -1.2
NPC1-213ENST00000591955 ERVK-9P63128 1117 aa7.56□□□□□ -1.2
NPC1-213ENST00000591955 LINC00114Q6XXX2 140 aa7.56□□□□□ -1.2
NPC1-213ENST00000591955 FAM9BQ8IZU0 186 aa7.56□□□□□ -1.2
NPC1-213ENST00000591955 EDARADDQ8WWZ3 215 aa7.56□□□□□ -1.2
NPC1-213ENST00000591955 NAP1L5Q96NT1 182 aaPredicted RBP7.56□□□□□ -1.2
NPC1-213ENST00000591955 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.56□□□□□ -1.2
NPC1-213ENST00000591955 TIMMDC1Q9NPL8 285 aa7.56□□□□□ -1.2
NPC1-213ENST00000591955 GDF2Q9UK05 429 aaPredicted RBP7.56□□□□□ -1.2
NPC1-213ENST00000591955 DENND4BO75064 1496 aaPredicted RBP7.55□□□□□ -1.2
NPC1-213ENST00000591955 CFAP74Q9C0B2 1584 aa7.55□□□□□ -1.2
NPC1-213ENST00000591955 CASKIN1Q8WXD9 1431 aa7.55□□□□□ -1.2
NPC1-213ENST00000591955 CLN3Q13286 438 aa7.55□□□□□ -1.2
NPC1-213ENST00000591955 SKIV2LQ15477 1246 aaKnown RBP7.55□□□□□ -1.2
NPC1-213ENST00000591955 ZNF326Q5BKZ1 582 aaKnown RBP7.55□□□□□ -1.2
NPC1-213ENST00000591955 NPM2Q86SE8 214 aaKnown RBP7.55□□□□□ -1.2
NPC1-213ENST00000591955 NLRP3Q96P20 1036 aa7.55□□□□□ -1.2
NPC1-213ENST00000591955 SUV39H2Q9H5I1 410 aa7.55□□□□□ -1.2
NPC1-213ENST00000591955 HMX1Q9NP08 348 aaPredicted RBP7.55□□□□□ -1.2
NPC1-213ENST00000591955 LRPPRCP42704 1394 aaKnown RBP7.55□□□□□ -1.2
NPC1-213ENST00000591955 C3P01024 1663 aa7.54□□□□□ -1.2
NPC1-213ENST00000591955 GOLGA6L3A6NEY3 463 aa7.54□□□□□ -1.2
NPC1-213ENST00000591955 C1QTNF9BB2RNN3 333 aa7.54□□□□□ -1.2
NPC1-213ENST00000591955 WASLO00401 505 aaPredicted RBP7.54□□□□□ -1.2
NPC1-213ENST00000591955 GIGYF1O75420 1035 aaPredicted RBP7.54□□□□□ -1.2
NPC1-213ENST00000591955 AP1G2O75843 785 aa7.54□□□□□ -1.2
NPC1-213ENST00000591955 MRE11P49959 708 aa7.54□□□□□ -1.2
NPC1-213ENST00000591955 AAMPQ13685 434 aa7.54□□□□□ -1.2
NPC1-213ENST00000591955 FAM50AQ14320 339 aaKnown RBP7.54□□□□□ -1.2
NPC1-213ENST00000591955 RALBP1Q15311 655 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms