RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 RAPGEF4Q8WZA2 1011 aa11.51□□□□□ -0.57
DNMT1-224ENST00000591764 TSR3Q9UJK0 312 aaKnown RBP11.51□□□□□ -0.57
DNMT1-224ENST00000591764 HOXC9P31274 260 aa11.5□□□□□ -0.57
DNMT1-224ENST00000591764 NYAP1Q6ZVC0 841 aa11.5□□□□□ -0.57
DNMT1-224ENST00000591764 FLAD1Q8NFF5 587 aa11.5□□□□□ -0.57
DNMT1-224ENST00000591764 MAP3K19Q56UN5 1328 aa11.5□□□□□ -0.57
DNMT1-224ENST00000591764 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
DNMT1-224ENST00000591764 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
DNMT1-224ENST00000591764 NLGN2Q8NFZ4 835 aa11.48□□□□□ -0.57
DNMT1-224ENST00000591764 TATDN2Q93075 761 aa11.48□□□□□ -0.57
DNMT1-224ENST00000591764 PNMA3Q9UL41 463 aa11.48□□□□□ -0.57
DNMT1-224ENST00000591764 PCDH11XQ9BZA7 1347 aa11.48□□□□□ -0.57
DNMT1-224ENST00000591764 PCDH11YQ9BZA8 1340 aa11.48□□□□□ -0.57
DNMT1-224ENST00000591764 NSD2O96028 1365 aa11.48□□□□□ -0.57
DNMT1-224ENST00000591764 MEGF6O75095 1541 aa11.48□□□□□ -0.57
DNMT1-224ENST00000591764 SHANK3Q9BYB0 1731 aa11.48□□□□□ -0.57
DNMT1-224ENST00000591764 C5P01031 1676 aa11.47□□□□□ -0.57
DNMT1-224ENST00000591764 TATP17735 454 aaPredicted RBP11.47□□□□□ -0.57
DNMT1-224ENST00000591764 KCNQ4P56696 695 aa11.47□□□□□ -0.57
DNMT1-224ENST00000591764 KCNV2Q8TDN2 545 aa11.47□□□□□ -0.57
DNMT1-224ENST00000591764 NPDC1Q9NQX5 325 aaPredicted RBP11.47□□□□□ -0.57
DNMT1-224ENST00000591764 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
DNMT1-224ENST00000591764 CD2APQ9Y5K6 639 aa11.46□□□□□ -0.57
DNMT1-224ENST00000591764 RGPD2P0DJD1 1756 aa11.46□□□□□ -0.58
DNMT1-224ENST00000591764 KIF24Q5T7B8 1368 aa11.45□□□□□ -0.58
DNMT1-224ENST00000591764 PALLDQ8WX93 1383 aa11.45□□□□□ -0.58
DNMT1-224ENST00000591764 NBPF26B4DH59 902 aa11.45□□□□□ -0.58
DNMT1-224ENST00000591764 RGS20O76081 388 aa11.45□□□□□ -0.58
DNMT1-224ENST00000591764 COL23A1Q86Y22 540 aaPredicted RBP11.45□□□□□ -0.58
DNMT1-224ENST00000591764 SMARCC1Q92922 1105 aaPredicted RBP11.45□□□□□ -0.58
DNMT1-224ENST00000591764 AK7Q96M32 723 aa11.45□□□□□ -0.58
DNMT1-224ENST00000591764 GPBP1L1Q9HC44 474 aaPredicted RBP11.45□□□□□ -0.58
DNMT1-224ENST00000591764 FLT4P35916 1363 aa11.44□□□□□ -0.58
DNMT1-224ENST00000591764 YBX3P16989 372 aaKnown RBP eCLIP11.44□□□□□ -0.58
DNMT1-224ENST00000591764 KCNC4Q03721 635 aa11.44□□□□□ -0.58
DNMT1-224ENST00000591764 RRS1Q15050 365 aaKnown RBP11.44□□□□□ -0.58
DNMT1-224ENST00000591764 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
DNMT1-224ENST00000591764 MSL1Q68DK7 614 aa11.44□□□□□ -0.58
DNMT1-224ENST00000591764 NUDT18Q6ZVK8 323 aa11.44□□□□□ -0.58
DNMT1-224ENST00000591764 ATP10DQ9P241 1426 aa11.43□□□□□ -0.58
DNMT1-224ENST00000591764 CEP350Q5VT06 3117 aa11.43□□□□□ -0.58
DNMT1-224ENST00000591764 ST20-MTHFSA0A0A6YYL1 179 aa11.43□□□□□ -0.58
DNMT1-224ENST00000591764 PPP4CP60510 307 aa11.43□□□□□ -0.58
DNMT1-224ENST00000591764 TMF1P82094 1093 aa11.43□□□□□ -0.58
DNMT1-224ENST00000591764 NBPF6Q5VWK0 638 aa11.43□□□□□ -0.58
DNMT1-224ENST00000591764 PADI6Q6TGC4 694 aa11.43□□□□□ -0.58
DNMT1-224ENST00000591764 TTC13Q8NBP0 860 aa11.43□□□□□ -0.58
DNMT1-224ENST00000591764 NBPF4Q96M43 638 aa11.43□□□□□ -0.58
DNMT1-224ENST00000591764 TESK2Q96S53 571 aa11.43□□□□□ -0.58
DNMT1-224ENST00000591764 INSRP06213 1382 aa11.42□□□□□ -0.58
DNMT1-224ENST00000591764 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
DNMT1-224ENST00000591764 KIF20BQ96Q89 1820 aa11.42□□□□□ -0.58
DNMT1-224ENST00000591764 MPRIPQ6WCQ1 1025 aa11.42□□□□□ -0.58
DNMT1-224ENST00000591764 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
DNMT1-224ENST00000591764 RBM27Q9P2N5 1060 aaKnown RBP11.42□□□□□ -0.58
DNMT1-224ENST00000591764 C4BP0C0L5 1744 aa11.41□□□□□ -0.58
DNMT1-224ENST00000591764 USHBP1Q8N6Y0 703 aa11.41□□□□□ -0.58
DNMT1-224ENST00000591764 GGNBP2Q9H3C7 697 aa11.41□□□□□ -0.58
DNMT1-224ENST00000591764 FYB1O15117 783 aa11.4□□□□□ -0.58
DNMT1-224ENST00000591764 SSFA2P28290 1259 aa11.4□□□□□ -0.58
DNMT1-224ENST00000591764 SPG7Q9UQ90 795 aa11.4□□□□□ -0.58
DNMT1-224ENST00000591764 FBLN1P23142 703 aa11.39□□□□□ -0.59
DNMT1-224ENST00000591764 PKD1L3Q7Z443 1732 aa11.39□□□□□ -0.59
DNMT1-224ENST00000591764 ITGB4P16144 1822 aa11.39□□□□□ -0.59
DNMT1-224ENST00000591764 ADCY9O60503 1353 aa11.39□□□□□ -0.59
DNMT1-224ENST00000591764 HSP90AB2PQ58FF8 381 aa11.38□□□□□ -0.59
DNMT1-224ENST00000591764 UBR3Q6ZT12 1888 aa11.38□□□□□ -0.59
DNMT1-224ENST00000591764 IGSF1Q8N6C5 1336 aa11.37□□□□□ -0.59
DNMT1-224ENST00000591764 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.37□□□□□ -0.59
DNMT1-224ENST00000591764 HSPA6P17066 643 aa11.37□□□□□ -0.59
DNMT1-224ENST00000591764 TJAP1Q5JTD0 557 aa11.37□□□□□ -0.59
DNMT1-224ENST00000591764 ZNF526Q8TF50 670 aaPredicted RBP11.37□□□□□ -0.59
DNMT1-224ENST00000591764 TMOD3Q9NYL9 352 aa11.37□□□□□ -0.59
DNMT1-224ENST00000591764 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
DNMT1-224ENST00000591764 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
DNMT1-224ENST00000591764 PPM1GO15355 546 aaPredicted RBP11.36□□□□□ -0.59
DNMT1-224ENST00000591764 CYP27B1O15528 508 aa11.36□□□□□ -0.59
DNMT1-224ENST00000591764 RNF40O75150 1001 aa11.36□□□□□ -0.59
DNMT1-224ENST00000591764 SIK1P57059 783 aa11.36□□□□□ -0.59
DNMT1-224ENST00000591764 VSIG10Q8N0Z9 540 aa11.36□□□□□ -0.59
DNMT1-224ENST00000591764 IRX2Q9BZI1 471 aaPredicted RBP11.36□□□□□ -0.59
DNMT1-224ENST00000591764 GNPATO15228 680 aa11.35□□□□□ -0.59
DNMT1-224ENST00000591764 PIGBQ92521 554 aa11.35□□□□□ -0.59
DNMT1-224ENST00000591764 PLEKHG2Q9H7P9 1386 aa11.35□□□□□ -0.59
DNMT1-224ENST00000591764 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
DNMT1-224ENST00000591764 MTRQ99707 1265 aa11.34□□□□□ -0.59
DNMT1-224ENST00000591764 ANKRD26Q9UPS8 1709 aa11.34□□□□□ -0.59
DNMT1-224ENST00000591764 NCAPD2Q15021 1401 aa11.34□□□□□ -0.59
DNMT1-224ENST00000591764 ATP6V1AP38606 617 aa11.33□□□□□ -0.6
DNMT1-224ENST00000591764 APLP1P51693 650 aa11.33□□□□□ -0.6
DNMT1-224ENST00000591764 IFNL2Q8IZJ0 200 aa11.33□□□□□ -0.6
DNMT1-224ENST00000591764 EMILIN1Q9Y6C2 1016 aa11.33□□□□□ -0.6
DNMT1-224ENST00000591764 CICQ96RK0 1608 aaPredicted RBP11.33□□□□□ -0.6
DNMT1-224ENST00000591764 MMP10P09238 476 aa11.32□□□□□ -0.6
DNMT1-224ENST00000591764 LINC00116Q8NCU8 138 aa11.32□□□□□ -0.6
DNMT1-224ENST00000591764 EYA1Q99502 592 aa11.32□□□□□ -0.6
DNMT1-224ENST00000591764 WWC3Q9ULE0 1092 aa11.32□□□□□ -0.6
DNMT1-224ENST00000591764 RTCBQ9Y3I0 505 aaKnown RBP11.32□□□□□ -0.6
DNMT1-224ENST00000591764 MAP2P11137 1827 aaKnown RBP11.32□□□□□ -0.6
DNMT1-224ENST00000591764 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms