RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 KIF1BPQ96EK5 621 aa17.98■□□□□ 0.47
CIRBP-228ENST00000590347 NUP62CLQ9H1M0 184 aa17.98■□□□□ 0.47
CIRBP-228ENST00000590347 HDAC5Q9UQL6 1122 aa17.98■□□□□ 0.47
CIRBP-228ENST00000590347 SLU7O95391 586 aaKnown RBP17.98■□□□□ 0.47
CIRBP-228ENST00000590347 SYCP1Q15431 976 aa17.98■□□□□ 0.47
CIRBP-228ENST00000590347 TNMDQ9H2S6 317 aa17.98■□□□□ 0.47
CIRBP-228ENST00000590347 BMS1Q14692 1282 aaKnown RBP17.97■□□□□ 0.47
CIRBP-228ENST00000590347 TERF2IPQ9NYB0 399 aa17.97■□□□□ 0.47
CIRBP-228ENST00000590347 AK2P54819 239 aa17.97■□□□□ 0.47
CIRBP-228ENST00000590347 RAD50Q92878 1312 aa17.97■□□□□ 0.47
CIRBP-228ENST00000590347 ZNF165P49910 485 aa17.96■□□□□ 0.47
CIRBP-228ENST00000590347 TTC6Q86TZ1 520 aa17.96■□□□□ 0.47
CIRBP-228ENST00000590347 INTS4Q96HW7 963 aaKnown RBP17.96■□□□□ 0.47
CIRBP-228ENST00000590347 RIMS2Q9UQ26 1411 aa17.96■□□□□ 0.47
CIRBP-228ENST00000590347 NEURL4Q96JN8 1562 aa17.96■□□□□ 0.47
CIRBP-228ENST00000590347 NOP2P46087 812 aaKnown RBP17.96■□□□□ 0.47
CIRBP-228ENST00000590347 ZSCAN26Q16670 478 aa17.96■□□□□ 0.47
CIRBP-228ENST00000590347 METP08581 1390 aa17.96■□□□□ 0.47
CIRBP-228ENST00000590347 SETBP1Q9Y6X0 1596 aa17.96■□□□□ 0.47
CIRBP-228ENST00000590347 GJB2P29033 226 aa17.96■□□□□ 0.47
CIRBP-228ENST00000590347 HDGFL2Q7Z4V5 671 aaPredicted RBP17.96■□□□□ 0.47
CIRBP-228ENST00000590347 FAM177A1Q8N128 213 aaPredicted RBP17.96■□□□□ 0.47
CIRBP-228ENST00000590347 ERO1AQ96HE7 468 aa17.96■□□□□ 0.47
CIRBP-228ENST00000590347 F6X3S4 739 aa17.95■□□□□ 0.46
CIRBP-228ENST00000590347 CEBPZQ03701 1054 aaKnown RBP17.95■□□□□ 0.46
CIRBP-228ENST00000590347 ANKRD44Q8N8A2 993 aa17.95■□□□□ 0.46
CIRBP-228ENST00000590347 ABCC4O15439 1325 aa17.95■□□□□ 0.46
CIRBP-228ENST00000590347 LMAN1P49257 510 aa17.95■□□□□ 0.46
CIRBP-228ENST00000590347 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
CIRBP-228ENST00000590347 PREX1Q8TCU6 1659 aa17.95■□□□□ 0.46
CIRBP-228ENST00000590347 GOLGA6L4A6NEF3 574 aa17.94■□□□□ 0.46
CIRBP-228ENST00000590347 CCDC69A6NI79 296 aa17.94■□□□□ 0.46
CIRBP-228ENST00000590347 MCM2P49736 904 aa17.94■□□□□ 0.46
CIRBP-228ENST00000590347 LRRC8AQ8IWT6 810 aa17.94■□□□□ 0.46
CIRBP-228ENST00000590347 DIAPH1O60610 1272 aaKnown RBP17.94■□□□□ 0.46
CIRBP-228ENST00000590347 RASEFQ8IZ41 740 aa17.94■□□□□ 0.46
CIRBP-228ENST00000590347 TCEANC2Q96MN5 208 aa17.94■□□□□ 0.46
CIRBP-228ENST00000590347 IL1RAPL2Q9NP60 686 aa17.94■□□□□ 0.46
CIRBP-228ENST00000590347 FAM53CQ9NYF3 392 aa17.94■□□□□ 0.46
CIRBP-228ENST00000590347 CLTCQ00610 1675 aaKnown RBP17.94■□□□□ 0.46
CIRBP-228ENST00000590347 RUFY3Q7L099 469 aa17.94■□□□□ 0.46
CIRBP-228ENST00000590347 PLEKHA4Q9H4M7 779 aa17.94■□□□□ 0.46
CIRBP-228ENST00000590347 TMEM131LA2VDJ0 1609 aa17.93■□□□□ 0.46
CIRBP-228ENST00000590347 FOSBP53539 338 aa17.93■□□□□ 0.46
CIRBP-228ENST00000590347 CHMLP26374 656 aa17.93■□□□□ 0.46
CIRBP-228ENST00000590347 OAS2P29728 719 aaKnown RBP17.93■□□□□ 0.46
CIRBP-228ENST00000590347 PTPN21Q16825 1174 aa17.93■□□□□ 0.46
CIRBP-228ENST00000590347 FOXR1Q6PIV2 292 aa17.93■□□□□ 0.46
CIRBP-228ENST00000590347 NME9Q86XW9 330 aa17.93■□□□□ 0.46
CIRBP-228ENST00000590347 SPG7Q9UQ90 795 aa17.93■□□□□ 0.46
CIRBP-228ENST00000590347 PTPRCP08575 1304 aa17.92■□□□□ 0.46
CIRBP-228ENST00000590347 A2ML1A8K2U0 1454 aa17.92■□□□□ 0.46
CIRBP-228ENST00000590347 MED14O60244 1454 aa17.92■□□□□ 0.46
CIRBP-228ENST00000590347 IFIT2P09913 472 aaKnown RBP17.92■□□□□ 0.46
CIRBP-228ENST00000590347 TMEM87AQ8NBN3 555 aa17.92■□□□□ 0.46
CIRBP-228ENST00000590347 TSPYL1Q9H0U9 437 aa17.92■□□□□ 0.46
CIRBP-228ENST00000590347 LTKP29376 864 aa17.92■□□□□ 0.46
CIRBP-228ENST00000590347 PLA2G4DQ86XP0 818 aa17.92■□□□□ 0.46
CIRBP-228ENST00000590347 COL9A3Q14050 684 aaPredicted RBP17.91■□□□□ 0.46
CIRBP-228ENST00000590347 MTMR6Q9Y217 621 aa17.91■□□□□ 0.46
CIRBP-228ENST00000590347 PTPRMP28827 1452 aa17.91■□□□□ 0.46
CIRBP-228ENST00000590347 NR1I2O75469 434 aa17.91■□□□□ 0.46
CIRBP-228ENST00000590347 CHRM1P11229 460 aaPredicted RBP17.91■□□□□ 0.46
CIRBP-228ENST00000590347 CASQ1P31415 396 aa17.91■□□□□ 0.46
CIRBP-228ENST00000590347 TEX35Q5T0J7 233 aa17.91■□□□□ 0.46
CIRBP-228ENST00000590347 RBM33Q96EV2 1170 aaKnown RBP17.91■□□□□ 0.46
CIRBP-228ENST00000590347 BICD2Q8TD16 824 aa17.9■□□□□ 0.46
CIRBP-228ENST00000590347 PPFIA3O75145 1194 aa17.9■□□□□ 0.46
CIRBP-228ENST00000590347 GNL2Q13823 731 aaKnown RBP17.9■□□□□ 0.46
CIRBP-228ENST00000590347 RRS1Q15050 365 aaKnown RBP17.9■□□□□ 0.46
CIRBP-228ENST00000590347 NUTM1Q86Y26 1132 aa17.9■□□□□ 0.46
CIRBP-228ENST00000590347 API5Q9BZZ5 524 aaKnown RBP17.9■□□□□ 0.46
CIRBP-228ENST00000590347 EMILIN1Q9Y6C2 1016 aa17.9■□□□□ 0.46
CIRBP-228ENST00000590347 MSH6P52701 1360 aa17.9■□□□□ 0.46
CIRBP-228ENST00000590347 SASH3O75995 380 aa17.89■□□□□ 0.46
CIRBP-228ENST00000590347 TMCO3Q6UWJ1 677 aa17.89■□□□□ 0.46
CIRBP-228ENST00000590347 C11orf57Q6ZUT1 292 aaPredicted RBP17.89■□□□□ 0.46
CIRBP-228ENST00000590347 CDC37L1Q7L3B6 337 aa17.89■□□□□ 0.46
CIRBP-228ENST00000590347 KCNG1Q9UIX4 513 aa17.89■□□□□ 0.46
CIRBP-228ENST00000590347 ALKQ9UM73 1620 aa17.89■□□□□ 0.45
CIRBP-228ENST00000590347 HTATSF1O43719 755 aaKnown RBP17.89■□□□□ 0.45
CIRBP-228ENST00000590347 CASTP20810 708 aaKnown RBP17.89■□□□□ 0.45
CIRBP-228ENST00000590347 NYAP1Q6ZVC0 841 aa17.89■□□□□ 0.45
CIRBP-228ENST00000590347 HOMER1Q86YM7 354 aa17.89■□□□□ 0.45
CIRBP-228ENST00000590347 CFAP44Q96MT7 982 aa17.89■□□□□ 0.45
CIRBP-228ENST00000590347 RRP15Q9Y3B9 282 aaKnown RBP17.89■□□□□ 0.45
CIRBP-228ENST00000590347 RGS12O14924 1447 aa17.88■□□□□ 0.45
CIRBP-228ENST00000590347 ARHGEF28Q8N1W1 1705 aaKnown RBP17.88■□□□□ 0.45
CIRBP-228ENST00000590347 GOLGA6L19H0YKK7 550 aa17.88■□□□□ 0.45
CIRBP-228ENST00000590347 H2AFXP16104 143 aaPredicted RBP17.88■□□□□ 0.45
CIRBP-228ENST00000590347 SNW1Q13573 536 aaKnown RBP17.88■□□□□ 0.45
CIRBP-228ENST00000590347 ICE2Q659A1 982 aa17.88■□□□□ 0.45
CIRBP-228ENST00000590347 CCAR2Q8N163 923 aaKnown RBP17.88■□□□□ 0.45
CIRBP-228ENST00000590347 MIS18AQ9NYP9 233 aa17.88■□□□□ 0.45
CIRBP-228ENST00000590347 RTL1A6NKG5 1358 aa17.88■□□□□ 0.45
CIRBP-228ENST00000590347 IL16Q14005 1332 aa17.88■□□□□ 0.45
CIRBP-228ENST00000590347 EFCC1Q9HA90 598 aa17.87■□□□□ 0.45
CIRBP-228ENST00000590347 PACS2Q86VP3 889 aa17.87■□□□□ 0.45
CIRBP-228ENST00000590347 NECTIN2Q92692 538 aa17.87■□□□□ 0.45
CIRBP-228ENST00000590347 NUDT16Q96DE0 195 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms