RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 PRPF4BQ13523 1007 aaKnown RBP9□□□□□ -0.97
LAMA3-210ENST00000588770 CCDC30Q5VVM6 783 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 SCRN1Q12765 414 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 ZNF280DQ6N043 979 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 WDR3Q9UNX4 943 aaKnown RBP eCLIP9□□□□□ -0.97
LAMA3-210ENST00000588770 TRAK1Q9UPV9 953 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 FIBPO43427 364 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 ICA1Q05084 483 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
LAMA3-210ENST00000588770 C17orf50Q8WW18 174 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 PECAM1P16284 738 aaPredicted RBP9□□□□□ -0.97
LAMA3-210ENST00000588770 PLA2G4AP47712 749 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 PKD2Q13563 968 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 WHAMMQ8TF30 809 aa9□□□□□ -0.97
LAMA3-210ENST00000588770 ANKRD36BQ8N2N9 1353 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 CCDC92Q53HC0 331 aaPredicted RBP8.99□□□□□ -0.97
LAMA3-210ENST00000588770 FBXW10Q5XX13 1052 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 PHACTR2O75167 634 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 U2AF1L5P0DN76 240 aaPredicted RBP8.99□□□□□ -0.97
LAMA3-210ENST00000588770 SKILP12757 684 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 U2AF1Q01081 240 aaKnown RBP eCLIP8.99□□□□□ -0.97
LAMA3-210ENST00000588770 SDCCAG8Q86SQ7 713 aaPredicted RBP8.99□□□□□ -0.97
LAMA3-210ENST00000588770 RMDN2Q96LZ7 410 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 CUX2O14529 1486 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 ZNF428Q96B54 188 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 NUB1Q9Y5A7 615 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 PTPRCP08575 1304 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 SEC31AO94979 1220 aaKnown RBP8.99□□□□□ -0.97
LAMA3-210ENST00000588770 RPSAP08865 295 aaKnown RBP8.99□□□□□ -0.97
LAMA3-210ENST00000588770 CCNHP51946 323 aaPredicted RBP8.99□□□□□ -0.97
LAMA3-210ENST00000588770 KIAA0825Q8IV33 1275 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 B4GALNT2Q8NHY0 566 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 WDR66Q8TBY9 1149 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 PHF23Q9BUL5 403 aaPredicted RBP8.99□□□□□ -0.97
LAMA3-210ENST00000588770 LRRCC1Q9C099 1032 aa8.99□□□□□ -0.97
LAMA3-210ENST00000588770 ZSCAN16Q9H4T2 348 aaPredicted RBP8.99□□□□□ -0.97
LAMA3-210ENST00000588770 NCOA2Q15596 1464 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 RAPGEF2Q9Y4G8 1499 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 VPS37CA5D8V6 355 aaPredicted RBP8.98□□□□□ -0.97
LAMA3-210ENST00000588770 CEP104O60308 925 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 SEPT6Q14141 434 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 FILIP1LQ4L180 1135 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 IQUBQ8NA54 791 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 BICD2Q8TD16 824 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 MAF1Q9H063 256 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 DNAI1Q9UI46 699 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 FHOD1Q9Y613 1164 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 NCOA1Q15788 1441 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.98□□□□□ -0.97
LAMA3-210ENST00000588770 SGSM2O43147 1006 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 C21orf2O43822 256 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 CAVIN2O95810 425 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 TUBB4AP04350 444 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 CCDC18Q5T9S5 1454 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 CPLX2Q6PUV4 134 aaKnown RBP8.98□□□□□ -0.97
LAMA3-210ENST00000588770 ZNF232Q9UNY5 417 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 ERC2O15083 957 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 EVCP57679 992 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 ISM2Q6H9L7 571 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 SLC30A9Q6PML9 568 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 HDXQ7Z353 690 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 SPDYE1Q8NFV5 336 aaPredicted RBP8.98□□□□□ -0.97
LAMA3-210ENST00000588770 PLEKHA4Q9H4M7 779 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 DDX19BQ9UMR2 479 aa8.98□□□□□ -0.97
LAMA3-210ENST00000588770 RBM47A0AV96 593 aaKnown RBP8.97□□□□□ -0.97
LAMA3-210ENST00000588770 KIF5CO60282 957 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 NEK4P51957 841 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 C1QTNF12Q5T7M4 302 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 DDX46Q7L014 1031 aaKnown RBP8.97□□□□□ -0.97
LAMA3-210ENST00000588770 PARD3BQ8TEW8 1205 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 LRMPQ12912 555 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 MYBPC2Q14324 1141 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 AMOTQ4VCS5 1084 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 YIPF3Q9GZM5 350 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.97□□□□□ -0.97
LAMA3-210ENST00000588770 CSB-PGBD3P0DP91 1061 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 ARHGAP25P42331 645 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 B4GALNT4Q76KP1 1039 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 MX1P20591 662 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 SLC8A1P32418 973 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 CAPRIN2Q6IMN6 1127 aaKnown RBP8.97□□□□□ -0.97
LAMA3-210ENST00000588770 C16orf87Q6PH81 154 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 CLEC17AQ6ZS10 378 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 AFAP1L1Q8TED9 768 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 TCP11Q8WWU5 503 aa8.97□□□□□ -0.97
LAMA3-210ENST00000588770 ARHGEF1Q92888 912 aaKnown RBP8.97□□□□□ -0.97
LAMA3-210ENST00000588770 ZMAT2Q96NC0 199 aaKnown RBP8.97□□□□□ -0.97
LAMA3-210ENST00000588770 SSBP05455 408 aaKnown RBP eCLIP8.96□□□□□ -0.97
LAMA3-210ENST00000588770 SPATA24Q86W54 205 aa8.96□□□□□ -0.97
LAMA3-210ENST00000588770 CXorf38Q8TB03 319 aa8.96□□□□□ -0.97
LAMA3-210ENST00000588770 EXOC6BQ9Y2D4 811 aa8.96□□□□□ -0.97
LAMA3-210ENST00000588770 POTEB2H3BUK9 544 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 CPP00450 1065 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 MCM2P49736 904 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 SNCBQ16143 134 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 CREB3O43889 395 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 SMIM24O75264 130 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 CDC45O75419 566 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 DESP17661 470 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 SNX1Q13596 522 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms