RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 ST5P78524 1137 aa18.9■□□□□ 0.62
DDX39A-208ENST00000588692 C2CD5Q86YS7 1000 aa18.9■□□□□ 0.62
DDX39A-208ENST00000588692 NUP98P52948 1817 aa18.9■□□□□ 0.62
DDX39A-208ENST00000588692 ERVV-1B6SEH8 477 aa18.89■□□□□ 0.61
DDX39A-208ENST00000588692 CHL1O00533 1208 aa18.89■□□□□ 0.61
DDX39A-208ENST00000588692 KIF6Q6ZMV9 814 aa18.89■□□□□ 0.61
DDX39A-208ENST00000588692 NBPF5PQ86XG9 351 aaPredicted RBP18.89■□□□□ 0.61
DDX39A-208ENST00000588692 TTLL6Q8N841 843 aa18.89■□□□□ 0.61
DDX39A-208ENST00000588692 NIP7Q9Y221 180 aaKnown RBP eCLIP18.88■□□□□ 0.61
DDX39A-208ENST00000588692 MAP3K15Q6ZN16 1313 aa18.87■□□□□ 0.61
DDX39A-208ENST00000588692 MYL6BP14649 208 aa18.87■□□□□ 0.61
DDX39A-208ENST00000588692 ARFGEF2Q9Y6D5 1785 aa18.87■□□□□ 0.61
DDX39A-208ENST00000588692 TPTE2Q6XPS3 522 aa18.86■□□□□ 0.61
DDX39A-208ENST00000588692 NGEFQ8N5V2 710 aa18.86■□□□□ 0.61
DDX39A-208ENST00000588692 GPBP1L1Q9HC44 474 aaPredicted RBP18.86■□□□□ 0.61
DDX39A-208ENST00000588692 SBF1O95248 1867 aa18.86■□□□□ 0.61
DDX39A-208ENST00000588692 APAF1O14727 1248 aa18.85■□□□□ 0.61
DDX39A-208ENST00000588692 CALD1Q05682 793 aaKnown RBP18.85■□□□□ 0.61
DDX39A-208ENST00000588692 HLFQ16534 295 aa18.85■□□□□ 0.61
DDX39A-208ENST00000588692 CFAP44Q96MT7 982 aa18.85■□□□□ 0.61
DDX39A-208ENST00000588692 ANP32CO43423 234 aa18.84■□□□□ 0.61
DDX39A-208ENST00000588692 HOXB7P09629 217 aa18.84■□□□□ 0.61
DDX39A-208ENST00000588692 TTLL7Q6ZT98 887 aa18.84■□□□□ 0.61
DDX39A-208ENST00000588692 CCDC24Q8N4L8 307 aa18.84■□□□□ 0.61
DDX39A-208ENST00000588692 LAS1LQ9Y4W2 734 aaKnown RBP18.84■□□□□ 0.61
DDX39A-208ENST00000588692 IBTKQ9P2D0 1353 aaPredicted RBP18.84■□□□□ 0.61
DDX39A-208ENST00000588692 EIF2S2P20042 333 aaKnown RBP18.84■□□□□ 0.61
DDX39A-208ENST00000588692 PDIA6Q15084 440 aa18.84■□□□□ 0.61
DDX39A-208ENST00000588692 CACNA1SQ13698 1873 aa18.83■□□□□ 0.6
DDX39A-208ENST00000588692 C9orf131Q5VYM1 1079 aa18.83■□□□□ 0.6
DDX39A-208ENST00000588692 STYK1Q6J9G0 422 aa18.83■□□□□ 0.6
DDX39A-208ENST00000588692 LRP10Q7Z4F1 713 aa18.83■□□□□ 0.6
DDX39A-208ENST00000588692 ZNF622Q969S3 477 aaKnown RBP eCLIP18.83■□□□□ 0.61e-9■□□□□ 11.1
DDX39A-208ENST00000588692 NYXQ9GZU5 481 aa18.83■□□□□ 0.6
DDX39A-208ENST00000588692 SRGNP10124 158 aa18.82■□□□□ 0.6
DDX39A-208ENST00000588692 C1QTNF8P60827 252 aa18.82■□□□□ 0.6
DDX39A-208ENST00000588692 CNKSR1Q969H4 720 aa18.82■□□□□ 0.6
DDX39A-208ENST00000588692 MASTLQ96GX5 879 aa18.82■□□□□ 0.6
DDX39A-208ENST00000588692 ZBTB3Q9H5J0 574 aa18.82■□□□□ 0.6
DDX39A-208ENST00000588692 ANKRD36CQ5JPF3 1778 aa18.81■□□□□ 0.6
DDX39A-208ENST00000588692 CCDC184Q52MB2 194 aa18.81■□□□□ 0.6
DDX39A-208ENST00000588692 GIGYF2Q6Y7W6 1299 aaKnown RBP18.81■□□□□ 0.6
DDX39A-208ENST00000588692 ZNF526Q8TF50 670 aaPredicted RBP18.81■□□□□ 0.6
DDX39A-208ENST00000588692 IFT57Q9NWB7 429 aa18.81■□□□□ 0.6
DDX39A-208ENST00000588692 RIC1Q4ADV7 1423 aa18.8■□□□□ 0.6
DDX39A-208ENST00000588692 KLRG2A4D1S0 409 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-208ENST00000588692 GTF2E1P29083 439 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-208ENST00000588692 GNAI1P63096 354 aa18.8■□□□□ 0.6
DDX39A-208ENST00000588692 DDX21Q9NR30 783 aaKnown RBP eCLIP18.8■□□□□ 0.6
DDX39A-208ENST00000588692 RNF181Q9P0P0 153 aa18.8■□□□□ 0.6
DDX39A-208ENST00000588692 FER1L6Q2WGJ9 1857 aa18.8■□□□□ 0.6
DDX39A-208ENST00000588692 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
DDX39A-208ENST00000588692 ZNF853P0CG23 659 aa18.79■□□□□ 0.6
DDX39A-208ENST00000588692 KRT24Q2M2I5 525 aa18.79■□□□□ 0.6
DDX39A-208ENST00000588692 PROSER3Q2NL68 480 aa18.79■□□□□ 0.6
DDX39A-208ENST00000588692 MRS2Q9HD23 443 aa18.79■□□□□ 0.6
DDX39A-208ENST00000588692 MBIPQ9NS73 344 aa18.79■□□□□ 0.6
DDX39A-208ENST00000588692 TNRC6CQ9HCJ0 1690 aaKnown RBP18.79■□□□□ 0.6
DDX39A-208ENST00000588692 ZC3H4Q9UPT8 1303 aaKnown RBP18.79■□□□□ 0.6
DDX39A-208ENST00000588692 FAM177BA6PVY3 158 aa18.78■□□□□ 0.6
DDX39A-208ENST00000588692 NPR1P16066 1061 aa18.78■□□□□ 0.6
DDX39A-208ENST00000588692 HDGFL1Q5TGJ6 251 aa18.78■□□□□ 0.6
DDX39A-208ENST00000588692 ZNF34Q8IZ26 560 aa18.78■□□□□ 0.6
DDX39A-208ENST00000588692 UBN2Q6ZU65 1347 aa18.78■□□□□ 0.6
DDX39A-208ENST00000588692 TIAM2Q8IVF5 1701 aa18.78■□□□□ 0.6
DDX39A-208ENST00000588692 ANXA1P04083 346 aa18.77■□□□□ 0.6
DDX39A-208ENST00000588692 LMNB1P20700 586 aa18.77■□□□□ 0.6
DDX39A-208ENST00000588692 RASSF7Q02833 373 aa18.77■□□□□ 0.6
DDX39A-208ENST00000588692 PARP10Q53GL7 1025 aa18.77■□□□□ 0.6
DDX39A-208ENST00000588692 SOGA3Q5TF21 947 aa18.77■□□□□ 0.6
DDX39A-208ENST00000588692 PRPF40BQ6NWY9 871 aaKnown RBP18.77■□□□□ 0.6
DDX39A-208ENST00000588692 NECTIN2Q92692 538 aa18.77■□□□□ 0.6
DDX39A-208ENST00000588692 CCDC88AQ3V6T2 1871 aa18.77■□□□□ 0.6
DDX39A-208ENST00000588692 C21orf2O43822 256 aa18.77■□□□□ 0.59
DDX39A-208ENST00000588692 GPTP24298 496 aa18.77■□□□□ 0.59
DDX39A-208ENST00000588692 DBF4Q9UBU7 674 aaPredicted RBP18.77■□□□□ 0.59
DDX39A-208ENST00000588692 ABCC12Q96J65 1359 aa18.76■□□□□ 0.59
DDX39A-208ENST00000588692 NFKBIEO00221 500 aa18.76■□□□□ 0.59
DDX39A-208ENST00000588692 CCDC27Q2M243 656 aa18.76■□□□□ 0.59
DDX39A-208ENST00000588692 HSP90AB3PQ58FF7 597 aa18.76■□□□□ 0.59
DDX39A-208ENST00000588692 DUSP27Q5VZP5 1158 aa18.76■□□□□ 0.59
DDX39A-208ENST00000588692 COPS6Q7L5N1 327 aa18.76■□□□□ 0.59
DDX39A-208ENST00000588692 PPP1R42Q7Z4L9 355 aa18.76■□□□□ 0.59
DDX39A-208ENST00000588692 XAGE3Q8WTP9 111 aa18.76■□□□□ 0.59
DDX39A-208ENST00000588692 CHPF2Q9P2E5 772 aa18.76■□□□□ 0.59
DDX39A-208ENST00000588692 DICER1Q9UPY3 1922 aaKnown RBP18.76■□□□□ 0.59
DDX39A-208ENST00000588692 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
DDX39A-208ENST00000588692 RNF123Q5XPI4 1314 aa18.75■□□□□ 0.59
DDX39A-208ENST00000588692 LTBP3Q9NS15 1303 aa18.75■□□□□ 0.59
DDX39A-208ENST00000588692 NTSR2O95665 410 aa18.74■□□□□ 0.59
DDX39A-208ENST00000588692 CRY2Q49AN0 593 aa18.74■□□□□ 0.59
DDX39A-208ENST00000588692 ERFEQ4G0M1 354 aa18.74■□□□□ 0.59
DDX39A-208ENST00000588692 SUSD4Q5VX71 490 aa18.74■□□□□ 0.59
DDX39A-208ENST00000588692 NUTM1Q86Y26 1132 aa18.74■□□□□ 0.59
DDX39A-208ENST00000588692 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
DDX39A-208ENST00000588692 KIF3CO14782 793 aa18.73■□□□□ 0.59
DDX39A-208ENST00000588692 ALDH1B1P30837 517 aa18.73■□□□□ 0.59
DDX39A-208ENST00000588692 AIMP1Q12904 312 aaKnown RBP18.73■□□□□ 0.59
DDX39A-208ENST00000588692 CHMP4AQ9BY43 222 aa18.73■□□□□ 0.59
DDX39A-208ENST00000588692 HYPKQ9NX55 129 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms