RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 NBPF5PQ86XG9 351 aaPredicted RBP28.58■■■□□ 2.17
CIRBP-219ENST00000588411 ERBB4Q15303 1308 aa28.56■■■□□ 2.16
CIRBP-219ENST00000588411 KIF6Q6ZMV9 814 aa28.56■■■□□ 2.16
CIRBP-219ENST00000588411 C9orf131Q5VYM1 1079 aa28.55■■■□□ 2.16
CIRBP-219ENST00000588411 NGEFQ8N5V2 710 aa28.55■■■□□ 2.16
CIRBP-219ENST00000588411 ZNF622Q969S3 477 aaKnown RBP eCLIP28.55■■■□□ 2.16
CIRBP-219ENST00000588411 NIP7Q9Y221 180 aaKnown RBP eCLIP28.55■■■□□ 2.16
CIRBP-219ENST00000588411 CCDC24Q8N4L8 307 aa28.54■■■□□ 2.16
CIRBP-219ENST00000588411 ERVV-1B6SEH8 477 aa28.53■■■□□ 2.16
CIRBP-219ENST00000588411 TPTE2Q6XPS3 522 aa28.53■■■□□ 2.16
CIRBP-219ENST00000588411 DLEC1Q9Y238 1755 aa28.52■■■□□ 2.16
CIRBP-219ENST00000588411 MYL6BP14649 208 aa28.52■■■□□ 2.16
CIRBP-219ENST00000588411 MAP3K15Q6ZN16 1313 aa28.5■■■□□ 2.15
CIRBP-219ENST00000588411 CNKSR1Q969H4 720 aa28.5■■■□□ 2.15
CIRBP-219ENST00000588411 RNF181Q9P0P0 153 aa28.5■■■□□ 2.15
CIRBP-219ENST00000588411 EIF2S2P20042 333 aaKnown RBP28.49■■■□□ 2.15
CIRBP-219ENST00000588411 HLFQ16534 295 aa28.49■■■□□ 2.15
CIRBP-219ENST00000588411 TRIM35Q9UPQ4 493 aa28.49■■■□□ 2.15
CIRBP-219ENST00000588411 GTF2E1P29083 439 aaPredicted RBP28.48■■■□□ 2.15
CIRBP-219ENST00000588411 STYK1Q6J9G0 422 aa28.48■■■□□ 2.15
CIRBP-219ENST00000588411 MASTLQ96GX5 879 aa28.48■■■□□ 2.15
CIRBP-219ENST00000588411 LAS1LQ9Y4W2 734 aaKnown RBP28.48■■■□□ 2.15
CIRBP-219ENST00000588411 ANKRD31Q8N7Z5 1873 aa28.47■■■□□ 2.15
CIRBP-219ENST00000588411 CHL1O00533 1208 aa28.47■■■□□ 2.15
CIRBP-219ENST00000588411 NYXQ9GZU5 481 aa28.47■■■□□ 2.15
CIRBP-219ENST00000588411 SENP3-EIF4A1A0A087X0R7 540 aa28.46■■■□□ 2.15
CIRBP-219ENST00000588411 SRGNP10124 158 aa28.46■■■□□ 2.15
CIRBP-219ENST00000588411 TTLL7Q6ZT98 887 aa28.46■■■□□ 2.15
CIRBP-219ENST00000588411 FAM177BA6PVY3 158 aa28.45■■■□□ 2.14
CIRBP-219ENST00000588411 LMNB1P20700 586 aa28.45■■■□□ 2.14
CIRBP-219ENST00000588411 ZC3H4Q9UPT8 1303 aaKnown RBP28.44■■■□□ 2.14
CIRBP-219ENST00000588411 ZNF316A6NFI3 1004 aaPredicted RBP28.44■■■□□ 2.14
CIRBP-219ENST00000588411 RASSF7Q02833 373 aa28.44■■■□□ 2.14
CIRBP-219ENST00000588411 ZBTB3Q9H5J0 574 aa28.44■■■□□ 2.14
CIRBP-219ENST00000588411 CALD1Q05682 793 aaKnown RBP28.43■■■□□ 2.14
CIRBP-219ENST00000588411 SOGA3Q5TF21 947 aa28.43■■■□□ 2.14
CIRBP-219ENST00000588411 KDM2BQ8NHM5 1336 aa28.43■■■□□ 2.14
CIRBP-219ENST00000588411 C21orf2O43822 256 aa28.42■■■□□ 2.14
CIRBP-219ENST00000588411 NPR1P16066 1061 aa28.42■■■□□ 2.14
CIRBP-219ENST00000588411 COL11A2P13942 1736 aaPredicted RBP28.41■■■□□ 2.14
CIRBP-219ENST00000588411 APAF1O14727 1248 aa28.41■■■□□ 2.14
CIRBP-219ENST00000588411 PRPF40BQ6NWY9 871 aaKnown RBP28.41■■■□□ 2.14
CIRBP-219ENST00000588411 CFAP44Q96MT7 982 aa28.41■■■□□ 2.14
CIRBP-219ENST00000588411 KIF3CO14782 793 aa28.4■■■□□ 2.14
CIRBP-219ENST00000588411 ZNF219Q9P2Y4 722 aaPredicted RBP28.4■■■□□ 2.14
CIRBP-219ENST00000588411 IBTKQ9P2D0 1353 aaPredicted RBP28.39■■■□□ 2.14
CIRBP-219ENST00000588411 KLRG2A4D1S0 409 aaPredicted RBP28.39■■■□□ 2.14
CIRBP-219ENST00000588411 HOXB7P09629 217 aa28.39■■■□□ 2.14
CIRBP-219ENST00000588411 PDIA6Q15084 440 aa28.39■■■□□ 2.14
CIRBP-219ENST00000588411 GIGYF2Q6Y7W6 1299 aaKnown RBP28.39■■■□□ 2.14
CIRBP-219ENST00000588411 NFKBIEO00221 500 aa28.38■■■□□ 2.13
CIRBP-219ENST00000588411 GPTP24298 496 aa28.38■■■□□ 2.13
CIRBP-219ENST00000588411 NECTIN2Q92692 538 aa28.38■■■□□ 2.13
CIRBP-219ENST00000588411 ANP32CO43423 234 aa28.37■■■□□ 2.13
CIRBP-219ENST00000588411 PROSER3Q2NL68 480 aa28.37■■■□□ 2.13
CIRBP-219ENST00000588411 LRP10Q7Z4F1 713 aa28.37■■■□□ 2.13
CIRBP-219ENST00000588411 PARP10Q53GL7 1025 aa28.36■■■□□ 2.13
CIRBP-219ENST00000588411 ZNF34Q8IZ26 560 aa28.36■■■□□ 2.13
CIRBP-219ENST00000588411 TAOK3Q9H2K8 898 aa28.36■■■□□ 2.13
CIRBP-219ENST00000588411 DDX21Q9NR30 783 aaKnown RBP eCLIP28.36■■■□□ 2.13
CIRBP-219ENST00000588411 ANXA1P04083 346 aa28.35■■■□□ 2.13
CIRBP-219ENST00000588411 KRT24Q2M2I5 525 aa28.35■■■□□ 2.13
CIRBP-219ENST00000588411 HSP90AB3PQ58FF7 597 aa28.35■■■□□ 2.13
CIRBP-219ENST00000588411 HDGFL1Q5TGJ6 251 aa28.35■■■□□ 2.13
CIRBP-219ENST00000588411 PPP1R42Q7Z4L9 355 aa28.35■■■□□ 2.13
CIRBP-219ENST00000588411 NMRK2Q9NPI5 230 aa28.35■■■□□ 2.13
CIRBP-219ENST00000588411 IFT57Q9NWB7 429 aa28.35■■■□□ 2.13
CIRBP-219ENST00000588411 UBN2Q6ZU65 1347 aa28.35■■■□□ 2.13
CIRBP-219ENST00000588411 NUP98P52948 1817 aa28.34■■■□□ 2.13
CIRBP-219ENST00000588411 SBF1O95248 1867 aa28.34■■■□□ 2.13
CIRBP-219ENST00000588411 ALDH1B1P30837 517 aa28.34■■■□□ 2.13
CIRBP-219ENST00000588411 GNAI1P63096 354 aa28.34■■■□□ 2.13
CIRBP-219ENST00000588411 COPS6Q7L5N1 327 aa28.34■■■□□ 2.13
CIRBP-219ENST00000588411 NUTM1Q86Y26 1132 aa28.34■■■□□ 2.13
CIRBP-219ENST00000588411 C16orf71Q8IYS4 520 aaPredicted RBP28.34■■■□□ 2.13
CIRBP-219ENST00000588411 LTBP3Q9NS15 1303 aa28.34■■■□□ 2.13
CIRBP-219ENST00000588411 TOMM70O94826 608 aa28.33■■■□□ 2.13
CIRBP-219ENST00000588411 AIMP1Q12904 312 aaKnown RBP28.33■■■□□ 2.13
CIRBP-219ENST00000588411 ERFEQ4G0M1 354 aa28.33■■■□□ 2.13
CIRBP-219ENST00000588411 XAGE3Q8WTP9 111 aa28.33■■■□□ 2.13
CIRBP-219ENST00000588411 MBIPQ9NS73 344 aa28.33■■■□□ 2.13
CIRBP-219ENST00000588411 CCDC93Q567U6 631 aa28.32■■■□□ 2.12
CIRBP-219ENST00000588411 SUSD4Q5VX71 490 aa28.32■■■□□ 2.12
CIRBP-219ENST00000588411 ABCC12Q96J65 1359 aa28.32■■■□□ 2.12
CIRBP-219ENST00000588411 DUSP27Q5VZP5 1158 aa28.31■■■□□ 2.12
CIRBP-219ENST00000588411 RPGRQ92834 1020 aaKnown RBP28.31■■■□□ 2.12
CIRBP-219ENST00000588411 CHPF2Q9P2E5 772 aa28.31■■■□□ 2.12
CIRBP-219ENST00000588411 DBF4Q9UBU7 674 aaPredicted RBP28.31■■■□□ 2.12
CIRBP-219ENST00000588411 RIC1Q4ADV7 1423 aa28.31■■■□□ 2.12
CIRBP-219ENST00000588411 SLX4Q8IY92 1834 aa28.3■■■□□ 2.12
CIRBP-219ENST00000588411 ZNF853P0CG23 659 aa28.3■■■□□ 2.12
CIRBP-219ENST00000588411 PRELPP51888 382 aa28.3■■■□□ 2.12
CIRBP-219ENST00000588411 CRY2Q49AN0 593 aa28.3■■■□□ 2.12
CIRBP-219ENST00000588411 UTP14AQ9BVJ6 771 aaKnown RBP28.3■■■□□ 2.12
CIRBP-219ENST00000588411 ARFGEF2Q9Y6D5 1785 aa28.29■■■□□ 2.12
CIRBP-219ENST00000588411 NTSR2O95665 410 aa28.29■■■□□ 2.12
CIRBP-219ENST00000588411 MRS2Q9HD23 443 aa28.29■■■□□ 2.12
CIRBP-219ENST00000588411 RNF123Q5XPI4 1314 aa28.28■■■□□ 2.12
CIRBP-219ENST00000588411 GLTPD2A6NH11 291 aa28.28■■■□□ 2.12
CIRBP-219ENST00000588411 CCDC184Q52MB2 194 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms