RNA–Protein interactions for RNA: ENST00000588381.1

CDIP1-212, Transcript of cell death inducing p53 target 1, humanhuman

TSL 3

Gene CDIP1, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-212ENST00000588381 TOMM70O94826 608 aa23.11■■□□□ 1.29
CDIP1-212ENST00000588381 SRGNP10124 158 aa23.11■■□□□ 1.29
CDIP1-212ENST00000588381 LMNB1P20700 586 aa23.11■■□□□ 1.29
CDIP1-212ENST00000588381 STYK1Q6J9G0 422 aa23.11■■□□□ 1.29
CDIP1-212ENST00000588381 CNKSR1Q969H4 720 aa23.11■■□□□ 1.29
CDIP1-212ENST00000588381 TSPYL4Q9UJ04 414 aa23.11■■□□□ 1.29
CDIP1-212ENST00000588381 NIP7Q9Y221 180 aaKnown RBP eCLIP23.11■■□□□ 1.29
CDIP1-212ENST00000588381 ERBB4Q15303 1308 aa23.1■■□□□ 1.29
CDIP1-212ENST00000588381 KDM2BQ8NHM5 1336 aa23.1■■□□□ 1.29
CDIP1-212ENST00000588381 KLRG2A4D1S0 409 aaPredicted RBP23.1■■□□□ 1.29
CDIP1-212ENST00000588381 CCDC24Q8N4L8 307 aa23.1■■□□□ 1.29
CDIP1-212ENST00000588381 ANKRD31Q8N7Z5 1873 aa23.09■■□□□ 1.29
CDIP1-212ENST00000588381 RUNDC1Q96C34 613 aa23.09■■□□□ 1.29
CDIP1-212ENST00000588381 MASTLQ96GX5 879 aa23.09■■□□□ 1.29
CDIP1-212ENST00000588381 PRKRIP1Q9H875 184 aaPredicted RBP23.09■■□□□ 1.29
CDIP1-212ENST00000588381 LAMB4A4D0S4 1761 aa23.09■■□□□ 1.29
CDIP1-212ENST00000588381 SBF1O95248 1867 aa23.09■■□□□ 1.29
CDIP1-212ENST00000588381 HSPA6P17066 643 aa23.08■■□□□ 1.29
CDIP1-212ENST00000588381 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.29
CDIP1-212ENST00000588381 HLFQ16534 295 aa23.08■■□□□ 1.29
CDIP1-212ENST00000588381 RRP7AQ9Y3A4 280 aaKnown RBP23.08■■□□□ 1.29
CDIP1-212ENST00000588381 NMRK2Q9NPI5 230 aa23.07■■□□□ 1.28
CDIP1-212ENST00000588381 MAP3K15Q6ZN16 1313 aa23.07■■□□□ 1.28
CDIP1-212ENST00000588381 RASSF7Q02833 373 aa23.06■■□□□ 1.28
CDIP1-212ENST00000588381 SOGA3Q5TF21 947 aa23.06■■□□□ 1.28
CDIP1-212ENST00000588381 KIF6Q6ZMV9 814 aa23.06■■□□□ 1.28
CDIP1-212ENST00000588381 NFKBIEO00221 500 aa23.05■■□□□ 1.28
CDIP1-212ENST00000588381 C21orf2O43822 256 aa23.05■■□□□ 1.28
CDIP1-212ENST00000588381 ADAMTS8Q9UP79 889 aa23.05■■□□□ 1.28
CDIP1-212ENST00000588381 NPR1P16066 1061 aa23.04■■□□□ 1.28
CDIP1-212ENST00000588381 PRELPP51888 382 aa23.04■■□□□ 1.28
CDIP1-212ENST00000588381 NGEFQ8N5V2 710 aa23.04■■□□□ 1.28
CDIP1-212ENST00000588381 NYXQ9GZU5 481 aa23.04■■□□□ 1.28
CDIP1-212ENST00000588381 LTBP3Q9NS15 1303 aa23.04■■□□□ 1.28
CDIP1-212ENST00000588381 CEP350Q5VT06 3117 aa23.03■■□□□ 1.28
CDIP1-212ENST00000588381 CHL1O00533 1208 aa23.03■■□□□ 1.28
CDIP1-212ENST00000588381 MYL6BP14649 208 aa23.03■■□□□ 1.28
CDIP1-212ENST00000588381 PRPF40BQ6NWY9 871 aaKnown RBP23.03■■□□□ 1.28
CDIP1-212ENST00000588381 TTLL7Q6ZT98 887 aa23.03■■□□□ 1.28
CDIP1-212ENST00000588381 CCDC146Q8IYE0 955 aa23.03■■□□□ 1.28
CDIP1-212ENST00000588381 GLTPD2A6NH11 291 aa23.02■■□□□ 1.28
CDIP1-212ENST00000588381 GTF2E1P29083 439 aaPredicted RBP23.02■■□□□ 1.28
CDIP1-212ENST00000588381 NEUROD2Q15784 382 aa23.02■■□□□ 1.28
CDIP1-212ENST00000588381 RBM46Q8TBY0 533 aaKnown RBP23.02■■□□□ 1.28
CDIP1-212ENST00000588381 TRIM35Q9UPQ4 493 aa23.02■■□□□ 1.28
CDIP1-212ENST00000588381 LRP10Q7Z4F1 713 aa23.01■■□□□ 1.27
CDIP1-212ENST00000588381 C16orf71Q8IYS4 520 aaPredicted RBP23.01■■□□□ 1.27
CDIP1-212ENST00000588381 C7orf43Q8WVR3 580 aa23.01■■□□□ 1.27
CDIP1-212ENST00000588381 COL11A2P13942 1736 aaPredicted RBP23.01■■□□□ 1.27
CDIP1-212ENST00000588381 ALDH1B1P30837 517 aa23■■□□□ 1.27
CDIP1-212ENST00000588381 ZEB1P37275 1124 aaPredicted RBP23■■□□□ 1.27
CDIP1-212ENST00000588381 PDIA6Q15084 440 aa23■■□□□ 1.27
CDIP1-212ENST00000588381 GIGYF2Q6Y7W6 1299 aaKnown RBP23■■□□□ 1.27
CDIP1-212ENST00000588381 TAOK3Q9H2K8 898 aa23■■□□□ 1.27
CDIP1-212ENST00000588381 RRAGCQ9HB90 399 aa23■■□□□ 1.27
CDIP1-212ENST00000588381 EIF2S2P20042 333 aaKnown RBP22.99■■□□□ 1.27
CDIP1-212ENST00000588381 DPY19L2Q6NUT2 758 aa22.99■■□□□ 1.27
CDIP1-212ENST00000588381 ZNF34Q8IZ26 560 aa22.99■■□□□ 1.27
CDIP1-212ENST00000588381 IBTKQ9P2D0 1353 aaPredicted RBP22.99■■□□□ 1.27
CDIP1-212ENST00000588381 FAM177BA6PVY3 158 aa22.98■■□□□ 1.27
CDIP1-212ENST00000588381 ZNF219Q9P2Y4 722 aaPredicted RBP22.98■■□□□ 1.27
CDIP1-212ENST00000588381 SLX4Q8IY92 1834 aa22.97■■□□□ 1.27
CDIP1-212ENST00000588381 FER1L6Q2WGJ9 1857 aa22.97■■□□□ 1.27
CDIP1-212ENST00000588381 VEGFAP15692 232 aaPredicted RBP22.97■■□□□ 1.27
CDIP1-212ENST00000588381 FSTL1Q12841 308 aa22.97■■□□□ 1.27
CDIP1-212ENST00000588381 CRY2Q49AN0 593 aa22.97■■□□□ 1.27
CDIP1-212ENST00000588381 ERFEQ4G0M1 354 aa22.97■■□□□ 1.27
CDIP1-212ENST00000588381 ZBTB3Q9H5J0 574 aa22.97■■□□□ 1.27
CDIP1-212ENST00000588381 NUP98P52948 1817 aa22.96■■□□□ 1.27
CDIP1-212ENST00000588381 APLP1P51693 650 aa22.96■■□□□ 1.27
CDIP1-212ENST00000588381 PARP10Q53GL7 1025 aa22.96■■□□□ 1.27
CDIP1-212ENST00000588381 HOXB7P09629 217 aa22.95■■□□□ 1.26
CDIP1-212ENST00000588381 RIC1Q4ADV7 1423 aa22.95■■□□□ 1.26
CDIP1-212ENST00000588381 CCDC93Q567U6 631 aa22.95■■□□□ 1.26
CDIP1-212ENST00000588381 PPP1R42Q7Z4L9 355 aa22.95■■□□□ 1.26
CDIP1-212ENST00000588381 CFAP44Q96MT7 982 aa22.95■■□□□ 1.26
CDIP1-212ENST00000588381 ARFGEF2Q9Y6D5 1785 aa22.95■■□□□ 1.26
CDIP1-212ENST00000588381 TNRC6CQ9HCJ0 1690 aaKnown RBP22.94■■□□□ 1.26
CDIP1-212ENST00000588381 UBN2Q6ZU65 1347 aa22.94■■□□□ 1.26
CDIP1-212ENST00000588381 SUSD4Q5VX71 490 aa22.94■■□□□ 1.26
CDIP1-212ENST00000588381 NUTM1Q86Y26 1132 aa22.94■■□□□ 1.26
CDIP1-212ENST00000588381 RTKN2Q8IZC4 609 aa22.94■■□□□ 1.26
CDIP1-212ENST00000588381 DDX21Q9NR30 783 aaKnown RBP eCLIP22.94■■□□□ 1.26
CDIP1-212ENST00000588381 GPTP24298 496 aa22.93■■□□□ 1.26
CDIP1-212ENST00000588381 HOXA10P31260 410 aaPredicted RBP22.93■■□□□ 1.26
CDIP1-212ENST00000588381 CCDC88AQ3V6T2 1871 aa22.93■■□□□ 1.26
CDIP1-212ENST00000588381 PROSER3Q2NL68 480 aa22.92■■□□□ 1.26
CDIP1-212ENST00000588381 HSP90AB3PQ58FF7 597 aa22.92■■□□□ 1.26
CDIP1-212ENST00000588381 COPS6Q7L5N1 327 aa22.92■■□□□ 1.26
CDIP1-212ENST00000588381 LAS1LQ9Y4W2 734 aaKnown RBP22.92■■□□□ 1.26
CDIP1-212ENST00000588381 NTSR2O95665 410 aa22.91■■□□□ 1.26
CDIP1-212ENST00000588381 FKBP4Q02790 459 aaKnown RBP eCLIP22.91■■□□□ 1.26
CDIP1-212ENST00000588381 SLC10A5Q5PT55 438 aa22.91■■□□□ 1.26
CDIP1-212ENST00000588381 CC2D2BQ6DHV5 1058 aa22.91■■□□□ 1.26
CDIP1-212ENST00000588381 ABCC12Q96J65 1359 aa22.9■■□□□ 1.26
CDIP1-212ENST00000588381 DICER1Q9UPY3 1922 aaKnown RBP22.9■■□□□ 1.26
CDIP1-212ENST00000588381 RNF123Q5XPI4 1314 aa22.9■■□□□ 1.26
CDIP1-212ENST00000588381 CALD1Q05682 793 aaKnown RBP22.9■■□□□ 1.26
CDIP1-212ENST00000588381 GRIPAP1Q4V328 841 aa22.9■■□□□ 1.26
CDIP1-212ENST00000588381 SMC1BQ8NDV3 1235 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms