RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 TNNT2P45379 298 aaPredicted RBP7.4□□□□□ -1.22
SDF2-206ENST00000587788 PDE3AQ14432 1141 aa7.4□□□□□ -1.22
SDF2-206ENST00000587788 SEPT12Q8IYM1 358 aa7.4□□□□□ -1.22
SDF2-206ENST00000587788 KCNH5Q8NCM2 988 aa7.4□□□□□ -1.22
SDF2-206ENST00000587788 USP35Q9P2H5 1018 aa7.4□□□□□ -1.22
SDF2-206ENST00000587788 FAM182BQ5T319 152 aa7.39□□□□□ -1.23
SDF2-206ENST00000587788 CENPQQ7L2Z9 268 aaPredicted RBP7.39□□□□□ -1.23
SDF2-206ENST00000587788 WWC1Q8IX03 1113 aa7.39□□□□□ -1.23
SDF2-206ENST00000587788 KCNK17Q96T54 332 aa7.39□□□□□ -1.23
SDF2-206ENST00000587788 ZBED2Q9BTP6 218 aa7.39□□□□□ -1.23
SDF2-206ENST00000587788 BEGAINQ9BUH8 593 aa7.39□□□□□ -1.23
SDF2-206ENST00000587788 MYH16Q9H6N6 1097 aa7.39□□□□□ -1.23
SDF2-206ENST00000587788 POLKQ9UBT6 870 aa7.39□□□□□ -1.23
SDF2-206ENST00000587788 DISP2A7MBM2 1401 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 MAP3K19Q56UN5 1328 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 WDR17Q8IZU2 1322 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 SENP3-EIF4A1A0A087X0R7 540 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 A0A0G2JS52 829 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 NEFMP07197 916 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 DNAJB2P25686 324 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 ANP32AP39687 249 aaKnown RBP7.38□□□□□ -1.23
SDF2-206ENST00000587788 EVA1CP58658 441 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 PROX2Q3B8N5 592 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 POTEEQ6S8J3 1075 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 NUDT18Q6ZVK8 323 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 CCDC146Q8IYE0 955 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 TATDN2Q93075 761 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 CRBNQ96SW2 442 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 SLC4A5Q9BY07 1137 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 TMEM134Q9H6X4 195 aa7.38□□□□□ -1.23
SDF2-206ENST00000587788 VIRMAQ69YN4 1812 aaKnown RBP7.38□□□□□ -1.23
SDF2-206ENST00000587788 ERBB3P21860 1342 aa7.37□□□□□ -1.23
SDF2-206ENST00000587788 RRS1Q15050 365 aaKnown RBP7.37□□□□□ -1.23
SDF2-206ENST00000587788 TCP11L2Q8N4U5 519 aa7.37□□□□□ -1.23
SDF2-206ENST00000587788 DOT1LQ8TEK3 1739 aa7.37□□□□□ -1.23
SDF2-206ENST00000587788 RREB1Q92766 1687 aa7.37□□□□□ -1.23
SDF2-206ENST00000587788 PKD1L3Q7Z443 1732 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 IL16Q14005 1332 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 NHSQ6T4R5 1651 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 PPM1GO15355 546 aaPredicted RBP7.36□□□□□ -1.23
SDF2-206ENST00000587788 PLIN1O60240 522 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 ST18O60284 1047 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 U2AF1L5P0DN76 240 aaPredicted RBP7.36□□□□□ -1.23
SDF2-206ENST00000587788 HOXC9P31274 260 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 U2AF1Q01081 240 aaKnown RBP eCLIP7.36□□□□□ -1.23
SDF2-206ENST00000587788 SKIV2LQ15477 1246 aaKnown RBP7.36□□□□□ -1.23
SDF2-206ENST00000587788 TOM1L2Q6ZVM7 507 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 KRT27Q7Z3Y8 459 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 PACS2Q86VP3 889 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 ANKRD24Q8TF21 1146 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 RSPH6AQ9H0K4 717 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 PNMA3Q9UL41 463 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 BTAF1O14981 1849 aa7.36□□□□□ -1.23
SDF2-206ENST00000587788 NUP188Q5SRE5 1749 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 RTL1A6NKG5 1358 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 KIF24Q5T7B8 1368 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 ARHGAP33O14559 1287 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 CD46P15529 392 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 PBX2P40425 430 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 PSEN2P49810 448 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 VARS2Q5ST30 1063 aaKnown RBP7.35□□□□□ -1.23
SDF2-206ENST00000587788 MYSM1Q5VVJ2 828 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 IP6K1Q92551 441 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 PCMTD1Q96MG8 357 aaPredicted RBP7.35□□□□□ -1.23
SDF2-206ENST00000587788 EMILIN1Q9Y6C2 1016 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 ITGB4P16144 1822 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 KAT6BQ8WYB5 2073 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 TOGARAM1Q9Y4F4 1720 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 TNS2Q63HR2 1409 aa7.35□□□□□ -1.23
SDF2-206ENST00000587788 KDM2BQ8NHM5 1336 aa7.34□□□□□ -1.23
SDF2-206ENST00000587788 MAPK8IP3Q9UPT6 1336 aa7.34□□□□□ -1.23
SDF2-206ENST00000587788 RGPD3A6NKT7 1758 aaPredicted RBP7.34□□□□□ -1.23
SDF2-206ENST00000587788 RGPD4Q7Z3J3 1758 aa7.34□□□□□ -1.23
SDF2-206ENST00000587788 MEGF6O75095 1541 aa7.34□□□□□ -1.23
SDF2-206ENST00000587788 U2SURPO15042 1029 aaKnown RBP7.34□□□□□ -1.23
SDF2-206ENST00000587788 CSB-PGBD3P0DP91 1061 aa7.34□□□□□ -1.23
SDF2-206ENST00000587788 IL13P35225 146 aa7.34□□□□□ -1.23
SDF2-206ENST00000587788 AMPHP49418 695 aa7.34□□□□□ -1.23
SDF2-206ENST00000587788 CALD1Q05682 793 aaKnown RBP7.34□□□□□ -1.23
SDF2-206ENST00000587788 LTV1Q96GA3 475 aaPredicted RBP7.34□□□□□ -1.23
SDF2-206ENST00000587788 IPO9Q96P70 1041 aaKnown RBP7.34□□□□□ -1.23
SDF2-206ENST00000587788 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.34□□□□□ -1.23
SDF2-206ENST00000587788 CARD10Q9BWT7 1032 aa7.34□□□□□ -1.23
SDF2-206ENST00000587788 THRAP3Q9Y2W1 955 aaKnown RBP7.34□□□□□ -1.23
SDF2-206ENST00000587788 FLT4P35916 1363 aa7.33□□□□□ -1.24
SDF2-206ENST00000587788 CANXP27824 592 aaKnown RBP7.33□□□□□ -1.24
SDF2-206ENST00000587788 HSP90AB2PQ58FF8 381 aa7.33□□□□□ -1.24
SDF2-206ENST00000587788 SULF1Q8IWU6 871 aa7.33□□□□□ -1.24
SDF2-206ENST00000587788 ZNF428Q96B54 188 aa7.33□□□□□ -1.24
SDF2-206ENST00000587788 BACH2Q9BYV9 841 aa7.33□□□□□ -1.24
SDF2-206ENST00000587788 TBC1D2Q9BYX2 928 aa7.33□□□□□ -1.24
SDF2-206ENST00000587788 NLRP2Q9NX02 1062 aa7.33□□□□□ -1.24
SDF2-206ENST00000587788 KIAA1468Q9P260 1216 aa7.33□□□□□ -1.24
SDF2-206ENST00000587788 RABGEF1Q9UJ41 708 aa7.33□□□□□ -1.24
SDF2-206ENST00000587788 COL3A1P02461 1466 aaPredicted RBP7.32□□□□□ -1.24
SDF2-206ENST00000587788 SMAPO00193 183 aa7.32□□□□□ -1.24
SDF2-206ENST00000587788 RARSP54136 660 aaKnown RBP7.32□□□□□ -1.24
SDF2-206ENST00000587788 EMP3P54852 163 aa7.32□□□□□ -1.24
SDF2-206ENST00000587788 C20orf194Q5TEA3 1177 aa7.32□□□□□ -1.24
SDF2-206ENST00000587788 DMRTA1Q5VZB9 504 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms