RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
SMARCA4-210ENST00000586892 GRIN3BO60391 1043 aa17.26■□□□□ 0.35
SMARCA4-210ENST00000586892 BRCA1P38398 1863 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-210ENST00000586892 MAP3K15Q6ZN16 1313 aa17.25■□□□□ 0.35
SMARCA4-210ENST00000586892 YBX3P16989 372 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMARCA4-210ENST00000586892 HDGFL1Q5TGJ6 251 aa17.25■□□□□ 0.35
SMARCA4-210ENST00000586892 DUSP27Q5VZP5 1158 aa17.25■□□□□ 0.35
SMARCA4-210ENST00000586892 LRP10Q7Z4F1 713 aa17.25■□□□□ 0.35
SMARCA4-210ENST00000586892 A0A0G2JLW4 131 aa17.24■□□□□ 0.35
SMARCA4-210ENST00000586892 TTLL7Q6ZT98 887 aa17.24■□□□□ 0.35
SMARCA4-210ENST00000586892 NECTIN2Q92692 538 aa17.24■□□□□ 0.35
SMARCA4-210ENST00000586892 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
SMARCA4-210ENST00000586892 DPEP1P16444 411 aa17.23■□□□□ 0.35
SMARCA4-210ENST00000586892 HLFQ16534 295 aa17.23■□□□□ 0.35
SMARCA4-210ENST00000586892 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
SMARCA4-210ENST00000586892 WDR63Q8IWG1 891 aa17.23■□□□□ 0.35
SMARCA4-210ENST00000586892 CNBD1Q8NA66 436 aa17.23■□□□□ 0.35
SMARCA4-210ENST00000586892 CHMP4AQ9BY43 222 aa17.23■□□□□ 0.35
SMARCA4-210ENST00000586892 NIP7Q9Y221 180 aaKnown RBP eCLIP17.23■□□□□ 0.35
SMARCA4-210ENST00000586892 ATP10DQ9P241 1426 aa17.22■□□□□ 0.35
SMARCA4-210ENST00000586892 NPHP1O15259 732 aa17.22■□□□□ 0.35
SMARCA4-210ENST00000586892 ANXA1P04083 346 aa17.22■□□□□ 0.35
SMARCA4-210ENST00000586892 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-210ENST00000586892 PRR5LQ6MZQ0 368 aa17.22■□□□□ 0.35
SMARCA4-210ENST00000586892 ZBTB3Q9H5J0 574 aa17.22■□□□□ 0.35
SMARCA4-210ENST00000586892 CHPF2Q9P2E5 772 aa17.22■□□□□ 0.35
SMARCA4-210ENST00000586892 DBF4Q9UBU7 674 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-210ENST00000586892 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-210ENST00000586892 DLEC1Q9Y238 1755 aa17.22■□□□□ 0.35
SMARCA4-210ENST00000586892 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
SMARCA4-210ENST00000586892 KCNA3P22001 575 aa17.21■□□□□ 0.35
SMARCA4-210ENST00000586892 ST5P78524 1137 aa17.21■□□□□ 0.35
SMARCA4-210ENST00000586892 NBPF5PQ86XG9 351 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-210ENST00000586892 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-210ENST00000586892 BRIP1Q9BX63 1249 aa17.21■□□□□ 0.35
SMARCA4-210ENST00000586892 PIM2Q9P1W9 311 aa17.21■□□□□ 0.35
SMARCA4-210ENST00000586892 ARFGEF1Q9Y6D6 1849 aa17.2■□□□□ 0.34
SMARCA4-210ENST00000586892 GIGYF2Q6Y7W6 1299 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-210ENST00000586892 COPS6Q7L5N1 327 aa17.2■□□□□ 0.34
SMARCA4-210ENST00000586892 C8orf58Q8NAV2 365 aa17.2■□□□□ 0.34
SMARCA4-210ENST00000586892 HYPKQ9NX55 129 aa17.2■□□□□ 0.34
SMARCA4-210ENST00000586892 WWC3Q9ULE0 1092 aa17.2■□□□□ 0.34
SMARCA4-210ENST00000586892 PDZRN3Q9UPQ7 1066 aa17.2■□□□□ 0.34
SMARCA4-210ENST00000586892 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
SMARCA4-210ENST00000586892 YY1P25490 414 aa17.19■□□□□ 0.34
SMARCA4-210ENST00000586892 CHRNA5P30532 468 aa17.19■□□□□ 0.34
SMARCA4-210ENST00000586892 PDE6BP35913 854 aa17.19■□□□□ 0.34
SMARCA4-210ENST00000586892 TPTE2Q6XPS3 522 aa17.19■□□□□ 0.34
SMARCA4-210ENST00000586892 XAGE3Q8WTP9 111 aa17.19■□□□□ 0.34
SMARCA4-210ENST00000586892 BCS1LQ9Y276 419 aa17.19■□□□□ 0.34
SMARCA4-210ENST00000586892 ANKRD36CQ5JPF3 1778 aa17.18■□□□□ 0.34
SMARCA4-210ENST00000586892 H0YIN7 160 aa17.18■□□□□ 0.34
SMARCA4-210ENST00000586892 AIMP1Q12904 312 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-210ENST00000586892 NYXQ9GZU5 481 aa17.18■□□□□ 0.34
SMARCA4-210ENST00000586892 FANCIQ9NVI1 1328 aa17.18■□□□□ 0.34
SMARCA4-210ENST00000586892 IBTKQ9P2D0 1353 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-210ENST00000586892 HSP90AB3PQ58FF7 597 aa17.17■□□□□ 0.34
SMARCA4-210ENST00000586892 DALRD3Q5D0E6 543 aaKnown RBP17.17■□□□□ 0.34
SMARCA4-210ENST00000586892 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
SMARCA4-210ENST00000586892 C2CD5Q86YS7 1000 aa17.17■□□□□ 0.34
SMARCA4-210ENST00000586892 ZNF34Q8IZ26 560 aa17.17■□□□□ 0.34
SMARCA4-210ENST00000586892 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
SMARCA4-210ENST00000586892 PARP10Q53GL7 1025 aa17.16■□□□□ 0.34
SMARCA4-210ENST00000586892 CCDC24Q8N4L8 307 aa17.16■□□□□ 0.34
SMARCA4-210ENST00000586892 TSPYL6Q8N831 410 aa17.16■□□□□ 0.34
SMARCA4-210ENST00000586892 UBN2Q6ZU65 1347 aa17.16■□□□□ 0.34
SMARCA4-210ENST00000586892 GPTP24298 496 aa17.15■□□□□ 0.34
SMARCA4-210ENST00000586892 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
SMARCA4-210ENST00000586892 GOLGA2Q08379 1002 aa17.15■□□□□ 0.34
SMARCA4-210ENST00000586892 TWISTNBQ3B726 338 aaPredicted RBP17.15■□□□□ 0.34
SMARCA4-210ENST00000586892 MYH16Q9H6N6 1097 aa17.15■□□□□ 0.34
SMARCA4-210ENST00000586892 ZNF521Q96K83 1311 aa17.15■□□□□ 0.34
SMARCA4-210ENST00000586892 FAM177BA6PVY3 158 aa17.14■□□□□ 0.33
SMARCA4-210ENST00000586892 ANKRD13DQ6ZTN6 518 aa17.14■□□□□ 0.33
SMARCA4-210ENST00000586892 PLBD2Q8NHP8 589 aa17.14■□□□□ 0.33
SMARCA4-210ENST00000586892 ARFGEF2Q9Y6D5 1785 aa17.13■□□□□ 0.33
SMARCA4-210ENST00000586892 PPP1R42Q7Z4L9 355 aa17.13■□□□□ 0.33
SMARCA4-210ENST00000586892 TTLL6Q8N841 843 aa17.13■□□□□ 0.33
SMARCA4-210ENST00000586892 CACNA1FO60840 1977 aa17.13■□□□□ 0.33
SMARCA4-210ENST00000586892 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
SMARCA4-210ENST00000586892 KLRG2A4D1S0 409 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-210ENST00000586892 SRGNP10124 158 aa17.12■□□□□ 0.33
SMARCA4-210ENST00000586892 TCIRG1Q13488 830 aa17.12■□□□□ 0.33
SMARCA4-210ENST00000586892 SUSD4Q5VX71 490 aa17.12■□□□□ 0.33
SMARCA4-210ENST00000586892 MIER1Q8N108 512 aa17.12■□□□□ 0.33
SMARCA4-210ENST00000586892 ZNF622Q969S3 477 aaKnown RBP eCLIP17.12■□□□□ 0.33
SMARCA4-210ENST00000586892 STK31Q9BXU1 1019 aa17.12■□□□□ 0.33
SMARCA4-210ENST00000586892 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-210ENST00000586892 RNF123Q5XPI4 1314 aa17.12■□□□□ 0.33
SMARCA4-210ENST00000586892 NTSR2O95665 410 aa17.11■□□□□ 0.33
SMARCA4-210ENST00000586892 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
SMARCA4-210ENST00000586892 NUTM1Q86Y26 1132 aa17.11■□□□□ 0.33
SMARCA4-210ENST00000586892 MASTLQ96GX5 879 aa17.11■□□□□ 0.33
SMARCA4-210ENST00000586892 PHAXQ9H814 394 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-210ENST00000586892 DDX58O95786 925 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-210ENST00000586892 EXOSC9Q06265 439 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-210ENST00000586892 ERFEQ4G0M1 354 aa17.1■□□□□ 0.33
SMARCA4-210ENST00000586892 ARHGAP27Q6ZUM4 889 aa17.1■□□□□ 0.33
SMARCA4-210ENST00000586892 NLRP10Q86W26 655 aa17.1■□□□□ 0.33
SMARCA4-210ENST00000586892 CNKSR1Q969H4 720 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms