RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 BICDL1Q6ZP65 573 aa20.87■□□□□ 0.93
ATG4D-205ENST00000586477 CFAP44Q96MT7 982 aa20.87■□□□□ 0.93
ATG4D-205ENST00000586477 YTHDC1Q96MU7 727 aaKnown RBP20.87■□□□□ 0.93
ATG4D-205ENST00000586477 MYH16Q9H6N6 1097 aa20.87■□□□□ 0.93
ATG4D-205ENST00000586477 E9PSI1 815 aa20.86■□□□□ 0.93
ATG4D-205ENST00000586477 DZIP3Q86Y13 1208 aaKnown RBP20.86■□□□□ 0.93
ATG4D-205ENST00000586477 ADCY9O60503 1353 aa20.85■□□□□ 0.93
ATG4D-205ENST00000586477 BCS1LQ9Y276 419 aa20.85■□□□□ 0.93
ATG4D-205ENST00000586477 COL11A2P13942 1736 aaPredicted RBP20.84■□□□□ 0.93
ATG4D-205ENST00000586477 SENP3-EIF4A1A0A087X0R7 540 aa20.84■□□□□ 0.93
ATG4D-205ENST00000586477 TSPYL4Q9UJ04 414 aa20.83■□□□□ 0.93
ATG4D-205ENST00000586477 ATP10DQ9P241 1426 aa20.82■□□□□ 0.92
ATG4D-205ENST00000586477 CHL1O00533 1208 aa20.82■□□□□ 0.92
ATG4D-205ENST00000586477 PRR5LQ6MZQ0 368 aa20.82■□□□□ 0.92
ATG4D-205ENST00000586477 PIM2Q9P1W9 311 aa20.82■□□□□ 0.92
ATG4D-205ENST00000586477 LAS1LQ9Y4W2 734 aaKnown RBP20.82■□□□□ 0.92
ATG4D-205ENST00000586477 NUP98P52948 1817 aa20.81■□□□□ 0.92
ATG4D-205ENST00000586477 ZNF853P0CG23 659 aa20.81■□□□□ 0.92
ATG4D-205ENST00000586477 CCDC24Q8N4L8 307 aa20.81■□□□□ 0.92
ATG4D-205ENST00000586477 HLFQ16534 295 aa20.8■□□□□ 0.92
ATG4D-205ENST00000586477 CHMP4AQ9BY43 222 aa20.8■□□□□ 0.92
ATG4D-205ENST00000586477 CLEC4GQ6UXB4 293 aa20.79■□□□□ 0.92
ATG4D-205ENST00000586477 LRP10Q7Z4F1 713 aa20.79■□□□□ 0.92
ATG4D-205ENST00000586477 SBF1O95248 1867 aa20.79■□□□□ 0.92
ATG4D-205ENST00000586477 SLFN5Q08AF3 891 aa20.78■□□□□ 0.92
ATG4D-205ENST00000586477 PDIA6Q15084 440 aa20.78■□□□□ 0.92
ATG4D-205ENST00000586477 KRT24Q2M2I5 525 aa20.78■□□□□ 0.92
ATG4D-205ENST00000586477 DALRD3Q5D0E6 543 aaKnown RBP20.78■□□□□ 0.92
ATG4D-205ENST00000586477 GPBP1L1Q9HC44 474 aaPredicted RBP20.78■□□□□ 0.92
ATG4D-205ENST00000586477 TTLL7Q6ZT98 887 aa20.77■□□□□ 0.92
ATG4D-205ENST00000586477 NPM2Q86SE8 214 aaKnown RBP20.77■□□□□ 0.92
ATG4D-205ENST00000586477 C2CD5Q86YS7 1000 aa20.77■□□□□ 0.92
ATG4D-205ENST00000586477 SETDB2Q96T68 719 aa20.77■□□□□ 0.92
ATG4D-205ENST00000586477 MBIPQ9NS73 344 aa20.77■□□□□ 0.92
ATG4D-205ENST00000586477 RGL2O15211 777 aa20.76■□□□□ 0.91
ATG4D-205ENST00000586477 MYL6BP14649 208 aa20.76■□□□□ 0.91
ATG4D-205ENST00000586477 ARHGAP27Q6ZUM4 889 aa20.76■□□□□ 0.91
ATG4D-205ENST00000586477 ZNF526Q8TF50 670 aaPredicted RBP20.76■□□□□ 0.91
ATG4D-205ENST00000586477 FANCIQ9NVI1 1328 aa20.76■□□□□ 0.91
ATG4D-205ENST00000586477 PROSER3Q2NL68 480 aa20.75■□□□□ 0.91
ATG4D-205ENST00000586477 BRIP1Q9BX63 1249 aa20.75■□□□□ 0.91
ATG4D-205ENST00000586477 CACNA1SQ13698 1873 aa20.74■□□□□ 0.91
ATG4D-205ENST00000586477 CNBD1Q8NA66 436 aa20.74■□□□□ 0.91
ATG4D-205ENST00000586477 ERBB4Q15303 1308 aa20.74■□□□□ 0.91
ATG4D-205ENST00000586477 MAP3K15Q6ZN16 1313 aa20.74■□□□□ 0.91
ATG4D-205ENST00000586477 ANXA1P04083 346 aa20.73■□□□□ 0.91
ATG4D-205ENST00000586477 HOXB7P09629 217 aa20.73■□□□□ 0.91
ATG4D-205ENST00000586477 CT47B1P0C2W7 299 aaPredicted RBP20.73■□□□□ 0.91
ATG4D-205ENST00000586477 TRMT2AQ8IZ69 625 aaKnown RBP20.73■□□□□ 0.91
ATG4D-205ENST00000586477 NIP7Q9Y221 180 aaKnown RBP eCLIP20.73■□□□□ 0.91
ATG4D-205ENST00000586477 ZNF652Q9Y2D9 606 aa20.73■□□□□ 0.91
ATG4D-205ENST00000586477 SLX4Q8IY92 1834 aa20.72■□□□□ 0.91
ATG4D-205ENST00000586477 ERVV-1B6SEH8 477 aa20.72■□□□□ 0.91
ATG4D-205ENST00000586477 H0YIN7 160 aa20.72■□□□□ 0.91
ATG4D-205ENST00000586477 EIF2S2P20042 333 aaKnown RBP20.72■□□□□ 0.91
ATG4D-205ENST00000586477 TSR2Q969E8 191 aaKnown RBP20.72■□□□□ 0.91
ATG4D-205ENST00000586477 CDCA7LQ96GN5 454 aa20.72■□□□□ 0.91
ATG4D-205ENST00000586477 TNRC6CQ9HCJ0 1690 aaKnown RBP20.72■□□□□ 0.91
ATG4D-205ENST00000586477 ARFGEF2Q9Y6D5 1785 aa20.72■□□□□ 0.91
ATG4D-205ENST00000586477 PRELPP51888 382 aa20.71■□□□□ 0.91
ATG4D-205ENST00000586477 TTLL6Q8N841 843 aa20.71■□□□□ 0.91
ATG4D-205ENST00000586477 PDE6BP35913 854 aa20.7■□□□□ 0.9
ATG4D-205ENST00000586477 DUSP27Q5VZP5 1158 aa20.7■□□□□ 0.9
ATG4D-205ENST00000586477 NBPF5PQ86XG9 351 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-205ENST00000586477 ZNF428Q96B54 188 aa20.7■□□□□ 0.9
ATG4D-205ENST00000586477 ZBTB3Q9H5J0 574 aa20.7■□□□□ 0.9
ATG4D-205ENST00000586477 SPINK5Q9NQ38 1064 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-205ENST00000586477 CCDC88AQ3V6T2 1871 aa20.7■□□□□ 0.9
ATG4D-205ENST00000586477 UBN2Q6ZU65 1347 aa20.7■□□□□ 0.9
ATG4D-205ENST00000586477 NECTIN2Q92692 538 aa20.69■□□□□ 0.9
ATG4D-205ENST00000586477 FER1L6Q2WGJ9 1857 aa20.69■□□□□ 0.9
ATG4D-205ENST00000586477 KLRG2A4D1S0 409 aaPredicted RBP20.68■□□□□ 0.9
ATG4D-205ENST00000586477 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
ATG4D-205ENST00000586477 SRGNP10124 158 aa20.68■□□□□ 0.9
ATG4D-205ENST00000586477 ST5P78524 1137 aa20.68■□□□□ 0.9
ATG4D-205ENST00000586477 RASSF7Q02833 373 aa20.68■□□□□ 0.9
ATG4D-205ENST00000586477 C9orf131Q5VYM1 1079 aa20.68■□□□□ 0.9
ATG4D-205ENST00000586477 ABCC12Q96J65 1359 aa20.68■□□□□ 0.9
ATG4D-205ENST00000586477 ANKRD36CQ5JPF3 1778 aa20.67■□□□□ 0.9
ATG4D-205ENST00000586477 KIF6Q6ZMV9 814 aa20.67■□□□□ 0.9
ATG4D-205ENST00000586477 ZNF34Q8IZ26 560 aa20.67■□□□□ 0.9
ATG4D-205ENST00000586477 ZNF622Q969S3 477 aaKnown RBP eCLIP20.67■□□□□ 0.9
ATG4D-205ENST00000586477 PDZRN3Q9UPQ7 1066 aa20.67■□□□□ 0.9
ATG4D-205ENST00000586477 NFKBIEO00221 500 aa20.66■□□□□ 0.9
ATG4D-205ENST00000586477 EXOSC9Q06265 439 aaKnown RBP20.66■□□□□ 0.9
ATG4D-205ENST00000586477 TWISTNBQ3B726 338 aaPredicted RBP20.66■□□□□ 0.9
ATG4D-205ENST00000586477 GIGYF2Q6Y7W6 1299 aaKnown RBP20.66■□□□□ 0.9
ATG4D-205ENST00000586477 GPTP24298 496 aa20.65■□□□□ 0.9
ATG4D-205ENST00000586477 STYK1Q6J9G0 422 aa20.65■□□□□ 0.9
ATG4D-205ENST00000586477 TPTE2Q6XPS3 522 aa20.65■□□□□ 0.9
ATG4D-205ENST00000586477 DDX21Q9NR30 783 aaKnown RBP eCLIP20.65■□□□□ 0.9
ATG4D-205ENST00000586477 SUSD4Q5VX71 490 aa20.64■□□□□ 0.89
ATG4D-205ENST00000586477 NUTM1Q86Y26 1132 aa20.64■□□□□ 0.89
ATG4D-205ENST00000586477 XAGE3Q8WTP9 111 aa20.64■□□□□ 0.89
ATG4D-205ENST00000586477 CHPF2Q9P2E5 772 aa20.64■□□□□ 0.89
ATG4D-205ENST00000586477 IBTKQ9P2D0 1353 aaPredicted RBP20.63■□□□□ 0.89
ATG4D-205ENST00000586477 NPHP1O15259 732 aa20.63■□□□□ 0.89
ATG4D-205ENST00000586477 C21orf2O43822 256 aa20.63■□□□□ 0.89
ATG4D-205ENST00000586477 ERFEQ4G0M1 354 aa20.63■□□□□ 0.89
ATG4D-205ENST00000586477 COPS6Q7L5N1 327 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms