RNA–Protein interactions for RNA: ENST00000586222.1

LDLRAD4-207, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-207ENST00000586222 CHPF2Q9P2E5 772 aa23.34■■□□□ 1.33
LDLRAD4-207ENST00000586222 MAP3K15Q6ZN16 1313 aa23.33■■□□□ 1.33
LDLRAD4-207ENST00000586222 TM4SF1P30408 202 aa23.33■■□□□ 1.33
LDLRAD4-207ENST00000586222 NFIXQ14938 502 aa23.33■■□□□ 1.33
LDLRAD4-207ENST00000586222 BCL2L12Q9HB09 334 aa23.33■■□□□ 1.33
LDLRAD4-207ENST00000586222 SCN7AQ01118 1682 aa23.32■■□□□ 1.32
LDLRAD4-207ENST00000586222 NPHP1O15259 732 aa23.32■■□□□ 1.32
LDLRAD4-207ENST00000586222 PDIA6Q15084 440 aa23.32■■□□□ 1.32
LDLRAD4-207ENST00000586222 CARMIL3Q8ND23 1372 aa23.31■■□□□ 1.32
LDLRAD4-207ENST00000586222 BICDL1Q6ZP65 573 aa23.31■■□□□ 1.32
LDLRAD4-207ENST00000586222 POLRMTO00411 1230 aaKnown RBP23.3■■□□□ 1.32
LDLRAD4-207ENST00000586222 YBX3P16989 372 aaKnown RBP eCLIP23.29■■□□□ 1.32
LDLRAD4-207ENST00000586222 HNRNPUQ00839 825 aaKnown RBP eCLIP23.29■■□□□ 1.32
LDLRAD4-207ENST00000586222 DDR1Q08345 913 aa23.29■■□□□ 1.32
LDLRAD4-207ENST00000586222 HSP90AB3PQ58FF7 597 aa23.29■■□□□ 1.32
LDLRAD4-207ENST00000586222 TBC1D9BQ66K14 1250 aa23.29■■□□□ 1.32
LDLRAD4-207ENST00000586222 COPS6Q7L5N1 327 aa23.29■■□□□ 1.32
LDLRAD4-207ENST00000586222 XAGE3Q8WTP9 111 aa23.29■■□□□ 1.32
LDLRAD4-207ENST00000586222 DDX58O95786 925 aaKnown RBP23.28■■□□□ 1.32
LDLRAD4-207ENST00000586222 ANXA1P04083 346 aa23.28■■□□□ 1.32
LDLRAD4-207ENST00000586222 SERPINB2P05120 415 aa23.28■■□□□ 1.32
LDLRAD4-207ENST00000586222 EXOSC9Q06265 439 aaKnown RBP23.28■■□□□ 1.32
LDLRAD4-207ENST00000586222 AIMP1Q12904 312 aaKnown RBP23.28■■□□□ 1.32
LDLRAD4-207ENST00000586222 PROSER3Q2NL68 480 aa23.28■■□□□ 1.32
LDLRAD4-207ENST00000586222 TTLL7Q6ZT98 887 aa23.28■■□□□ 1.32
LDLRAD4-207ENST00000586222 TSPYL6Q8N831 410 aa23.28■■□□□ 1.32
LDLRAD4-207ENST00000586222 ZBTB3Q9H5J0 574 aa23.28■■□□□ 1.32
LDLRAD4-207ENST00000586222 NIP7Q9Y221 180 aaKnown RBP eCLIP23.28■■□□□ 1.32
LDLRAD4-207ENST00000586222 BCORQ6W2J9 1755 aa23.27■■□□□ 1.32
LDLRAD4-207ENST00000586222 LRP10Q7Z4F1 713 aa23.27■■□□□ 1.32
LDLRAD4-207ENST00000586222 GRIN3BO60391 1043 aa23.26■■□□□ 1.31
LDLRAD4-207ENST00000586222 TGFB2P61812 414 aa23.26■■□□□ 1.31
LDLRAD4-207ENST00000586222 GIGYF2Q6Y7W6 1299 aaKnown RBP23.26■■□□□ 1.31
LDLRAD4-207ENST00000586222 SPINK5Q9NQ38 1064 aaPredicted RBP23.26■■□□□ 1.31
LDLRAD4-207ENST00000586222 ST5P78524 1137 aa23.25■■□□□ 1.31
LDLRAD4-207ENST00000586222 SLFN5Q08AF3 891 aa23.25■■□□□ 1.31
LDLRAD4-207ENST00000586222 TPTE2Q6XPS3 522 aa23.25■■□□□ 1.31
LDLRAD4-207ENST00000586222 ANKRD13DQ6ZTN6 518 aa23.25■■□□□ 1.31
LDLRAD4-207ENST00000586222 NBPF5PQ86XG9 351 aaPredicted RBP23.25■■□□□ 1.31
LDLRAD4-207ENST00000586222 CNBD1Q8NA66 436 aa23.25■■□□□ 1.31
LDLRAD4-207ENST00000586222 NYXQ9GZU5 481 aa23.25■■□□□ 1.31
LDLRAD4-207ENST00000586222 WWC3Q9ULE0 1092 aa23.25■■□□□ 1.31
LDLRAD4-207ENST00000586222 C10orf71Q711Q0 1435 aa23.25■■□□□ 1.31
LDLRAD4-207ENST00000586222 GTF2E1P29083 439 aaPredicted RBP23.24■■□□□ 1.31
LDLRAD4-207ENST00000586222 HLFQ16534 295 aa23.24■■□□□ 1.31
LDLRAD4-207ENST00000586222 PLBD2Q8NHP8 589 aa23.24■■□□□ 1.31
LDLRAD4-207ENST00000586222 ATP10DQ9P241 1426 aa23.24■■□□□ 1.31
LDLRAD4-207ENST00000586222 VAMP4O75379 141 aa23.23■■□□□ 1.31
LDLRAD4-207ENST00000586222 PARP10Q53GL7 1025 aa23.23■■□□□ 1.31
LDLRAD4-207ENST00000586222 PDZRN3Q9UPQ7 1066 aa23.23■■□□□ 1.31
LDLRAD4-207ENST00000586222 RIC3Q7Z5B4 369 aa23.22■■□□□ 1.31
LDLRAD4-207ENST00000586222 ZNF428Q96B54 188 aa23.22■■□□□ 1.31
LDLRAD4-207ENST00000586222 SLC4A2P04920 1241 aa23.21■■□□□ 1.31
LDLRAD4-207ENST00000586222 PPP1R42Q7Z4L9 355 aa23.21■■□□□ 1.31
LDLRAD4-207ENST00000586222 ZNF784Q8NCA9 323 aaPredicted RBP23.21■■□□□ 1.31
LDLRAD4-207ENST00000586222 CT47B1P0C2W7 299 aaPredicted RBP23.2■■□□□ 1.3
LDLRAD4-207ENST00000586222 GPTP24298 496 aa23.19■■□□□ 1.3
LDLRAD4-207ENST00000586222 PDE6BP35913 854 aa23.19■■□□□ 1.3
LDLRAD4-207ENST00000586222 TCIRG1Q13488 830 aa23.19■■□□□ 1.3
LDLRAD4-207ENST00000586222 BRIP1Q9BX63 1249 aa23.19■■□□□ 1.3
LDLRAD4-207ENST00000586222 CHD4Q14839 1912 aa23.18■■□□□ 1.3
LDLRAD4-207ENST00000586222 IBTKQ9P2D0 1353 aaPredicted RBP23.18■■□□□ 1.3
LDLRAD4-207ENST00000586222 A0A0G2JLW4 131 aa23.18■■□□□ 1.3
LDLRAD4-207ENST00000586222 PRR5LQ6MZQ0 368 aa23.18■■□□□ 1.3
LDLRAD4-207ENST00000586222 ZNF34Q8IZ26 560 aa23.18■■□□□ 1.3
LDLRAD4-207ENST00000586222 CDCA7LQ96GN5 454 aa23.18■■□□□ 1.3
LDLRAD4-207ENST00000586222 RNF123Q5XPI4 1314 aa23.17■■□□□ 1.3
LDLRAD4-207ENST00000586222 PHAXQ9H814 394 aaKnown RBP23.17■■□□□ 1.3
LDLRAD4-207ENST00000586222 NRXN2Q9P2S2 1712 aa23.16■■□□□ 1.3
LDLRAD4-207ENST00000586222 ZBED9Q6R2W3 1325 aa23.16■■□□□ 1.3
LDLRAD4-207ENST00000586222 H0YIN7 160 aa23.16■■□□□ 1.3
LDLRAD4-207ENST00000586222 TCERG1O14776 1098 aaKnown RBP23.16■■□□□ 1.3
LDLRAD4-207ENST00000586222 TRMT2AQ8IZ69 625 aaKnown RBP23.16■■□□□ 1.3
LDLRAD4-207ENST00000586222 NUP98P52948 1817 aa23.16■■□□□ 1.3
LDLRAD4-207ENST00000586222 KIF13BQ9NQT8 1826 aa23.16■■□□□ 1.3
LDLRAD4-207ENST00000586222 FAM177BA6PVY3 158 aa23.15■■□□□ 1.3
LDLRAD4-207ENST00000586222 NEXNQ0ZGT2 675 aa23.15■■□□□ 1.3
LDLRAD4-207ENST00000586222 KSR2Q6VAB6 950 aa23.15■■□□□ 1.3
LDLRAD4-207ENST00000586222 UTP14AQ9BVJ6 771 aaKnown RBP23.15■■□□□ 1.3
LDLRAD4-207ENST00000586222 DPEP1P16444 411 aa23.14■■□□□ 1.29
LDLRAD4-207ENST00000586222 FLIIQ13045 1269 aa23.14■■□□□ 1.29
LDLRAD4-207ENST00000586222 FKBP5Q13451 457 aaPredicted RBP23.14■■□□□ 1.29
LDLRAD4-207ENST00000586222 PIM2Q9P1W9 311 aa23.14■■□□□ 1.29
LDLRAD4-207ENST00000586222 AFDNP55196 1824 aaKnown RBP23.14■■□□□ 1.29
LDLRAD4-207ENST00000586222 PXDNLA1KZ92 1463 aa23.13■■□□□ 1.29
LDLRAD4-207ENST00000586222 CACNA1FO60840 1977 aa23.13■■□□□ 1.29
LDLRAD4-207ENST00000586222 C2CD5Q86YS7 1000 aa23.13■■□□□ 1.29
LDLRAD4-207ENST00000586222 UBN2Q6ZU65 1347 aa23.12■■□□□ 1.29
LDLRAD4-207ENST00000586222 HSP90B1P14625 803 aaKnown RBP23.12■■□□□ 1.29
LDLRAD4-207ENST00000586222 NLRP10Q86W26 655 aa23.12■■□□□ 1.29
LDLRAD4-207ENST00000586222 PI4KAP2A4QPH2 592 aa23.11■■□□□ 1.29
LDLRAD4-207ENST00000586222 TRIM28Q13263 835 aaKnown RBP23.11■■□□□ 1.29
LDLRAD4-207ENST00000586222 ALDH1L2Q3SY69 923 aa23.11■■□□□ 1.29
LDLRAD4-207ENST00000586222 SUSD4Q5VX71 490 aa23.11■■□□□ 1.29
LDLRAD4-207ENST00000586222 PI4KAP1Q8N8J0 262 aa23.11■■□□□ 1.29
LDLRAD4-207ENST00000586222 METTL22Q9BUU2 404 aaPredicted RBP23.11■■□□□ 1.29
LDLRAD4-207ENST00000586222 BCS1LQ9Y276 419 aa23.11■■□□□ 1.29
LDLRAD4-207ENST00000586222 MAP3K2Q9Y2U5 619 aa23.11■■□□□ 1.29
LDLRAD4-207ENST00000586222 ISCA1Q9BUE6 129 aa23.1■■□□□ 1.29
LDLRAD4-207ENST00000586222 TRMT112Q9UI30 125 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms