RNA–Protein interactions for RNA: ENST00000585400.1

NPHS1-203, Transcript of NPHS1, nephrin, humanhuman

TSL 1 (best)

Gene NPHS1, Length 999 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-203ENST00000585400 CLEC4GQ6UXB4 293 aa29.1■■■□□ 2.25
NPHS1-203ENST00000585400 LRP10Q7Z4F1 713 aa29.1■■■□□ 2.25
NPHS1-203ENST00000585400 CHPF2Q9P2E5 772 aa29.1■■■□□ 2.25
NPHS1-203ENST00000585400 GOLGB1Q14789 3259 aaKnown RBP29.1■■■□□ 2.25
NPHS1-203ENST00000585400 DDX21Q9NR30 783 aaKnown RBP eCLIP29.09■■■□□ 2.25
NPHS1-203ENST00000585400 HLFQ16534 295 aa29.08■■■□□ 2.25
NPHS1-203ENST00000585400 SETDB2Q96T68 719 aa29.08■■■□□ 2.25
NPHS1-203ENST00000585400 MAP3K15Q6ZN16 1313 aa29.08■■■□□ 2.25
NPHS1-203ENST00000585400 RGL2O15211 777 aa29.07■■■□□ 2.24
NPHS1-203ENST00000585400 TSPYL6Q8N831 410 aa29.07■■■□□ 2.24
NPHS1-203ENST00000585400 ZBTB3Q9H5J0 574 aa29.07■■■□□ 2.24
NPHS1-203ENST00000585400 FANCIQ9NVI1 1328 aa29.07■■■□□ 2.24
NPHS1-203ENST00000585400 CARMIL3Q8ND23 1372 aa29.06■■■□□ 2.24
NPHS1-203ENST00000585400 ERVV-1B6SEH8 477 aa29.06■■■□□ 2.24
NPHS1-203ENST00000585400 CHD4Q14839 1912 aa29.05■■■□□ 2.24
NPHS1-203ENST00000585400 XAGE3Q8WTP9 111 aa29.05■■■□□ 2.24
NPHS1-203ENST00000585400 SPINK5Q9NQ38 1064 aaPredicted RBP29.05■■■□□ 2.24
NPHS1-203ENST00000585400 DBF4Q9UBU7 674 aaPredicted RBP29.05■■■□□ 2.24
NPHS1-203ENST00000585400 ZNF521Q96K83 1311 aa29.04■■■□□ 2.24
NPHS1-203ENST00000585400 TGFB2P61812 414 aa29.04■■■□□ 2.24
NPHS1-203ENST00000585400 AIMP1Q12904 312 aaKnown RBP29.04■■■□□ 2.24
NPHS1-203ENST00000585400 COPS6Q7L5N1 327 aa29.04■■■□□ 2.24
NPHS1-203ENST00000585400 NIP7Q9Y221 180 aaKnown RBP eCLIP29.04■■■□□ 2.24
NPHS1-203ENST00000585400 KIF13BQ9NQT8 1826 aa29.03■■■□□ 2.24
NPHS1-203ENST00000585400 PXDNLA1KZ92 1463 aa29.03■■■□□ 2.24
NPHS1-203ENST00000585400 YBX3P16989 372 aaKnown RBP eCLIP29.02■■■□□ 2.24
NPHS1-203ENST00000585400 MYH16Q9H6N6 1097 aa29.02■■■□□ 2.24
NPHS1-203ENST00000585400 WWC3Q9ULE0 1092 aa29.02■■■□□ 2.24
NPHS1-203ENST00000585400 AFDNP55196 1824 aaKnown RBP29.01■■■□□ 2.24
NPHS1-203ENST00000585400 NRXN2Q9P2S2 1712 aa29.01■■■□□ 2.23
NPHS1-203ENST00000585400 A0A0G2JLW4 131 aa29.01■■■□□ 2.23
NPHS1-203ENST00000585400 GOLGA2Q08379 1002 aa29.01■■■□□ 2.23
NPHS1-203ENST00000585400 TWISTNBQ3B726 338 aaPredicted RBP29.01■■■□□ 2.23
NPHS1-203ENST00000585400 NPHP1O15259 732 aa29■■■□□ 2.23
NPHS1-203ENST00000585400 DPEP1P16444 411 aa29■■■□□ 2.23
NPHS1-203ENST00000585400 CCDC30Q5VVM6 783 aa29■■■□□ 2.23
NPHS1-203ENST00000585400 PRR5LQ6MZQ0 368 aa29■■■□□ 2.23
NPHS1-203ENST00000585400 CHMP4AQ9BY43 222 aa29■■■□□ 2.23
NPHS1-203ENST00000585400 HYPKQ9NX55 129 aa29■■■□□ 2.23
NPHS1-203ENST00000585400 GIGYF2Q6Y7W6 1299 aaKnown RBP28.99■■■□□ 2.23
NPHS1-203ENST00000585400 CCDC24Q8N4L8 307 aa28.99■■■□□ 2.23
NPHS1-203ENST00000585400 CNBD1Q8NA66 436 aa28.99■■■□□ 2.23
NPHS1-203ENST00000585400 ZNF784Q8NCA9 323 aaPredicted RBP28.99■■■□□ 2.23
NPHS1-203ENST00000585400 GRIN3BO60391 1043 aa28.98■■■□□ 2.23
NPHS1-203ENST00000585400 EXOSC9Q06265 439 aaKnown RBP28.98■■■□□ 2.23
NPHS1-203ENST00000585400 NBPF5PQ86XG9 351 aaPredicted RBP28.98■■■□□ 2.23
NPHS1-203ENST00000585400 ATP10DQ9P241 1426 aa28.97■■■□□ 2.23
NPHS1-203ENST00000585400 FAM177BA6PVY3 158 aa28.97■■■□□ 2.23
NPHS1-203ENST00000585400 GPTP24298 496 aa28.97■■■□□ 2.23
NPHS1-203ENST00000585400 KIAA1551Q9HCM1 1747 aa28.97■■■□□ 2.23
NPHS1-203ENST00000585400 CHRNA5P30532 468 aa28.96■■■□□ 2.23
NPHS1-203ENST00000585400 N4BP2Q86UW6 1770 aaPredicted RBP28.96■■■□□ 2.23
NPHS1-203ENST00000585400 TCERG1O14776 1098 aaKnown RBP28.95■■■□□ 2.22
NPHS1-203ENST00000585400 ST5P78524 1137 aa28.95■■■□□ 2.22
NPHS1-203ENST00000585400 NUP98P52948 1817 aa28.94■■■□□ 2.22
NPHS1-203ENST00000585400 PHAXQ9H814 394 aaKnown RBP28.94■■■□□ 2.22
NPHS1-203ENST00000585400 KCNA3P22001 575 aa28.93■■■□□ 2.22
NPHS1-203ENST00000585400 TPTE2Q6XPS3 522 aa28.93■■■□□ 2.22
NPHS1-203ENST00000585400 ZNF34Q8IZ26 560 aa28.93■■■□□ 2.22
NPHS1-203ENST00000585400 STK31Q9BXU1 1019 aa28.93■■■□□ 2.22
NPHS1-203ENST00000585400 UBN2Q6ZU65 1347 aa28.93■■■□□ 2.22
NPHS1-203ENST00000585400 ANKRD13DQ6ZTN6 518 aa28.92■■■□□ 2.22
NPHS1-203ENST00000585400 PLBD2Q8NHP8 589 aa28.92■■■□□ 2.22
NPHS1-203ENST00000585400 BRIP1Q9BX63 1249 aa28.92■■■□□ 2.22
NPHS1-203ENST00000585400 E9PSI1 815 aa28.91■■■□□ 2.22
NPHS1-203ENST00000585400 VAMP4O75379 141 aa28.91■■■□□ 2.22
NPHS1-203ENST00000585400 HSP90AB3PQ58FF7 597 aa28.91■■■□□ 2.22
NPHS1-203ENST00000585400 C2CD5Q86YS7 1000 aa28.91■■■□□ 2.22
NPHS1-203ENST00000585400 PDE6BP35913 854 aa28.9■■■□□ 2.22
NPHS1-203ENST00000585400 NYXQ9GZU5 481 aa28.9■■■□□ 2.22
NPHS1-203ENST00000585400 GTF2E1P29083 439 aaPredicted RBP28.89■■■□□ 2.22
NPHS1-203ENST00000585400 SUSD4Q5VX71 490 aa28.89■■■□□ 2.22
NPHS1-203ENST00000585400 PIM2Q9P1W9 311 aa28.89■■■□□ 2.22
NPHS1-203ENST00000585400 BCS1LQ9Y276 419 aa28.89■■■□□ 2.22
NPHS1-203ENST00000585400 H0YIN7 160 aa28.88■■■□□ 2.21
NPHS1-203ENST00000585400 SLFN5Q08AF3 891 aa28.88■■■□□ 2.21
NPHS1-203ENST00000585400 TCIRG1Q13488 830 aa28.88■■■□□ 2.21
NPHS1-203ENST00000585400 PARP10Q53GL7 1025 aa28.88■■■□□ 2.21
NPHS1-203ENST00000585400 NUTM1Q86Y26 1132 aa28.87■■■□□ 2.21
NPHS1-203ENST00000585400 CDCA7LQ96GN5 454 aa28.87■■■□□ 2.21
NPHS1-203ENST00000585400 ANKRD31Q8N7Z5 1873 aa28.87■■■□□ 2.21
NPHS1-203ENST00000585400 SLC4A2P04920 1241 aa28.86■■■□□ 2.21
NPHS1-203ENST00000585400 PPP1R42Q7Z4L9 355 aa28.86■■■□□ 2.21
NPHS1-203ENST00000585400 RIC3Q7Z5B4 369 aa28.86■■■□□ 2.21
NPHS1-203ENST00000585400 IBTKQ9P2D0 1353 aaPredicted RBP28.86■■■□□ 2.21
NPHS1-203ENST00000585400 DALRD3Q5D0E6 543 aaKnown RBP28.85■■■□□ 2.21
NPHS1-203ENST00000585400 PDZRN3Q9UPQ7 1066 aa28.85■■■□□ 2.21
NPHS1-203ENST00000585400 NTSR2O95665 410 aa28.84■■■□□ 2.21
NPHS1-203ENST00000585400 ERFEQ4G0M1 354 aa28.84■■■□□ 2.21
NPHS1-203ENST00000585400 NLRP10Q86W26 655 aa28.84■■■□□ 2.21
NPHS1-203ENST00000585400 DDX58O95786 925 aaKnown RBP28.83■■■□□ 2.21
NPHS1-203ENST00000585400 G2E3Q7L622 706 aa28.83■■■□□ 2.21
NPHS1-203ENST00000585400 ZNF622Q969S3 477 aaKnown RBP eCLIP28.83■■■□□ 2.21
NPHS1-203ENST00000585400 UTP14AQ9BVJ6 771 aaKnown RBP28.83■■■□□ 2.21
NPHS1-203ENST00000585400 ABCC12Q96J65 1359 aa28.83■■■□□ 2.21
NPHS1-203ENST00000585400 HNRNPUQ00839 825 aaKnown RBP eCLIP28.82■■■□□ 2.2
NPHS1-203ENST00000585400 ANKRD36CQ5JPF3 1778 aa28.82■■■□□ 2.2
NPHS1-203ENST00000585400 BRCA1P38398 1863 aaKnown RBP28.82■■■□□ 2.2
NPHS1-203ENST00000585400 ATP5J2-PTCD1G3V325 749 aa28.81■■■□□ 2.2
NPHS1-203ENST00000585400 ISCA1Q9BUE6 129 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms