RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 KRT24Q2M2I5 525 aa20.62■□□□□ 0.89
CSNK1D-223ENST00000584472 BCL2L12Q9HB09 334 aa20.62■□□□□ 0.89
CSNK1D-223ENST00000584472 TBC1D2BQ9UPU7 963 aa20.62■□□□□ 0.89
CSNK1D-223ENST00000584472 ADCY9O60503 1353 aa20.61■□□□□ 0.89
CSNK1D-223ENST00000584472 CAMTA2O94983 1202 aa20.61■□□□□ 0.89
CSNK1D-223ENST00000584472 BRCA1P38398 1863 aaKnown RBP20.6■□□□□ 0.89
CSNK1D-223ENST00000584472 EIF2S2P20042 333 aaKnown RBP20.6■□□□□ 0.89
CSNK1D-223ENST00000584472 EXOSC9Q06265 439 aaKnown RBP20.6■□□□□ 0.89
CSNK1D-223ENST00000584472 DDR1Q08345 913 aa20.59■□□□□ 0.89
CSNK1D-223ENST00000584472 CLEC4GQ6UXB4 293 aa20.59■□□□□ 0.89
CSNK1D-223ENST00000584472 C8orf58Q8NAV2 365 aa20.59■□□□□ 0.89
CSNK1D-223ENST00000584472 NRXN2Q9P2S2 1712 aa20.58■□□□□ 0.89
CSNK1D-223ENST00000584472 POLRMTO00411 1230 aaKnown RBP20.58■□□□□ 0.89
CSNK1D-223ENST00000584472 MYL6BP14649 208 aa20.58■□□□□ 0.89
CSNK1D-223ENST00000584472 NFIXQ14938 502 aa20.58■□□□□ 0.89
CSNK1D-223ENST00000584472 PDIA6Q15084 440 aa20.58■□□□□ 0.89
CSNK1D-223ENST00000584472 HDGFL1Q5TGJ6 251 aa20.58■□□□□ 0.89
CSNK1D-223ENST00000584472 CHMP4AQ9BY43 222 aa20.58■□□□□ 0.89
CSNK1D-223ENST00000584472 ZNF652Q9Y2D9 606 aa20.58■□□□□ 0.89
CSNK1D-223ENST00000584472 LRP10Q7Z4F1 713 aa20.57■□□□□ 0.88
CSNK1D-223ENST00000584472 TSPYL6Q8N831 410 aa20.57■□□□□ 0.88
CSNK1D-223ENST00000584472 DDX21Q9NR30 783 aaKnown RBP eCLIP20.57■□□□□ 0.886e-8■■□□□ 13.9
CSNK1D-223ENST00000584472 ERVV-1B6SEH8 477 aa20.56■□□□□ 0.88
CSNK1D-223ENST00000584472 ELL2O00472 640 aaPredicted RBP20.56■□□□□ 0.88
CSNK1D-223ENST00000584472 TWISTNBQ3B726 338 aaPredicted RBP20.56■□□□□ 0.88
CSNK1D-223ENST00000584472 KIF6Q6ZMV9 814 aa20.56■□□□□ 0.88
CSNK1D-223ENST00000584472 N4BP2Q86UW6 1770 aaPredicted RBP20.56■□□□□ 0.88
CSNK1D-223ENST00000584472 CARMIL3Q8ND23 1372 aa20.56■□□□□ 0.88
CSNK1D-223ENST00000584472 AFDNP55196 1824 aaKnown RBP20.55■□□□□ 0.88
CSNK1D-223ENST00000584472 PROSER3Q2NL68 480 aa20.55■□□□□ 0.88
CSNK1D-223ENST00000584472 TBC1D9BQ66K14 1250 aa20.55■□□□□ 0.88
CSNK1D-223ENST00000584472 NECTIN2Q92692 538 aa20.55■□□□□ 0.88
CSNK1D-223ENST00000584472 DBF4Q9UBU7 674 aaPredicted RBP20.55■□□□□ 0.88
CSNK1D-223ENST00000584472 ARFGEF1Q9Y6D6 1849 aa20.55■□□□□ 0.88
CSNK1D-223ENST00000584472 MAP3K15Q6ZN16 1313 aa20.54■□□□□ 0.88
CSNK1D-223ENST00000584472 DPEP1P16444 411 aa20.54■□□□□ 0.88
CSNK1D-223ENST00000584472 KCNA3P22001 575 aa20.54■□□□□ 0.88
CSNK1D-223ENST00000584472 CHPF2Q9P2E5 772 aa20.54■□□□□ 0.88
CSNK1D-223ENST00000584472 ATP10DQ9P241 1426 aa20.53■□□□□ 0.88
CSNK1D-223ENST00000584472 A0A0G2JLW4 131 aa20.53■□□□□ 0.88
CSNK1D-223ENST00000584472 VAMP4O75379 141 aa20.53■□□□□ 0.88
CSNK1D-223ENST00000584472 TTLL7Q6ZT98 887 aa20.53■□□□□ 0.88
CSNK1D-223ENST00000584472 SETDB2Q96T68 719 aa20.53■□□□□ 0.88
CSNK1D-223ENST00000584472 PIM2Q9P1W9 311 aa20.53■□□□□ 0.88
CSNK1D-223ENST00000584472 NUP98P52948 1817 aa20.53■□□□□ 0.88
CSNK1D-223ENST00000584472 CT47B1P0C2W7 299 aaPredicted RBP20.52■□□□□ 0.88
CSNK1D-223ENST00000584472 HYPKQ9NX55 129 aa20.52■□□□□ 0.88
CSNK1D-223ENST00000584472 ANXA1P04083 346 aa20.51■□□□□ 0.87
CSNK1D-223ENST00000584472 SERPINB2P05120 415 aa20.51■□□□□ 0.87
CSNK1D-223ENST00000584472 BICDL1Q6ZP65 573 aa20.51■□□□□ 0.87
CSNK1D-223ENST00000584472 CACNA1FO60840 1977 aa20.51■□□□□ 0.87
CSNK1D-223ENST00000584472 C1QTNF8P60827 252 aa20.5■□□□□ 0.87
CSNK1D-223ENST00000584472 HLFQ16534 295 aa20.5■□□□□ 0.87
CSNK1D-223ENST00000584472 CCDC30Q5VVM6 783 aa20.5■□□□□ 0.87
CSNK1D-223ENST00000584472 XAGE3Q8WTP9 111 aa20.5■□□□□ 0.87
CSNK1D-223ENST00000584472 PDZRN3Q9UPQ7 1066 aa20.5■□□□□ 0.87
CSNK1D-223ENST00000584472 BCS1LQ9Y276 419 aa20.5■□□□□ 0.87
CSNK1D-223ENST00000584472 COPS6Q7L5N1 327 aa20.49■□□□□ 0.87
CSNK1D-223ENST00000584472 ZBTB3Q9H5J0 574 aa20.49■□□□□ 0.87
CSNK1D-223ENST00000584472 DLEC1Q9Y238 1755 aa20.49■□□□□ 0.87
CSNK1D-223ENST00000584472 DALRD3Q5D0E6 543 aaKnown RBP20.48■□□□□ 0.87
CSNK1D-223ENST00000584472 GIGYF2Q6Y7W6 1299 aaKnown RBP20.48■□□□□ 0.87
CSNK1D-223ENST00000584472 ZNF428Q96B54 188 aa20.48■□□□□ 0.87
CSNK1D-223ENST00000584472 NIP7Q9Y221 180 aaKnown RBP eCLIP20.48■□□□□ 0.87
CSNK1D-223ENST00000584472 ANKRD36CQ5JPF3 1778 aa20.47■□□□□ 0.87
CSNK1D-223ENST00000584472 AIMP1Q12904 312 aaKnown RBP20.46■□□□□ 0.87
CSNK1D-223ENST00000584472 PRR5LQ6MZQ0 368 aa20.46■□□□□ 0.87
CSNK1D-223ENST00000584472 CNBD1Q8NA66 436 aa20.46■□□□□ 0.87
CSNK1D-223ENST00000584472 GPBP1L1Q9HC44 474 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-223ENST00000584472 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-223ENST00000584472 NBPF5PQ86XG9 351 aaPredicted RBP20.45■□□□□ 0.86
CSNK1D-223ENST00000584472 STK31Q9BXU1 1019 aa20.45■□□□□ 0.86
CSNK1D-223ENST00000584472 ANKRD31Q8N7Z5 1873 aa20.44■□□□□ 0.86
CSNK1D-223ENST00000584472 HSP90AB3PQ58FF7 597 aa20.44■□□□□ 0.86
CSNK1D-223ENST00000584472 ZNF34Q8IZ26 560 aa20.44■□□□□ 0.86
CSNK1D-223ENST00000584472 PLBD2Q8NHP8 589 aa20.44■□□□□ 0.86
CSNK1D-223ENST00000584472 WWC3Q9ULE0 1092 aa20.44■□□□□ 0.86
CSNK1D-223ENST00000584472 TCERG1O14776 1098 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-223ENST00000584472 RARSP54136 660 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-223ENST00000584472 ST5P78524 1137 aa20.43■□□□□ 0.86
CSNK1D-223ENST00000584472 ALDH1L2Q3SY69 923 aa20.43■□□□□ 0.86
CSNK1D-223ENST00000584472 TPTE2Q6XPS3 522 aa20.43■□□□□ 0.86
CSNK1D-223ENST00000584472 ANKRD13DQ6ZTN6 518 aa20.43■□□□□ 0.86
CSNK1D-223ENST00000584472 SSH1Q8WYL5 1049 aa20.43■□□□□ 0.86
CSNK1D-223ENST00000584472 BRIP1Q9BX63 1249 aa20.43■□□□□ 0.86
CSNK1D-223ENST00000584472 NYXQ9GZU5 481 aa20.43■□□□□ 0.86
CSNK1D-223ENST00000584472 ARFGEF2Q9Y6D5 1785 aa20.43■□□□□ 0.86
CSNK1D-223ENST00000584472 NPHP1O15259 732 aa20.42■□□□□ 0.86
CSNK1D-223ENST00000584472 CHRNA5P30532 468 aa20.42■□□□□ 0.86
CSNK1D-223ENST00000584472 PARP10Q53GL7 1025 aa20.42■□□□□ 0.86
CSNK1D-223ENST00000584472 ARHGAP27Q6ZUM4 889 aa20.42■□□□□ 0.86
CSNK1D-223ENST00000584472 GPTP24298 496 aa20.41■□□□□ 0.86
CSNK1D-223ENST00000584472 PDE6BP35913 854 aa20.41■□□□□ 0.86
CSNK1D-223ENST00000584472 PHAXQ9H814 394 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-223ENST00000584472 RCAN3Q9UKA8 241 aa20.41■□□□□ 0.86
CSNK1D-223ENST00000584472 UBN2Q6ZU65 1347 aa20.41■□□□□ 0.86
CSNK1D-223ENST00000584472 ZC3H4Q9UPT8 1303 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-223ENST00000584472 H0YIN7 160 aa20.4■□□□□ 0.86
CSNK1D-223ENST00000584472 TCIRG1Q13488 830 aa20.4■□□□□ 0.86
CSNK1D-223ENST00000584472 RIC1Q4ADV7 1423 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms