RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 NRXN2Q9P2S2 1712 aa35.26■■■■□ 3.24
SMARCD2-210ENST00000584400 ST5P78524 1137 aa35.26■■■■□ 3.24
SMARCD2-210ENST00000584400 KRT24Q2M2I5 525 aa35.26■■■■□ 3.24
SMARCD2-210ENST00000584400 KCNA3P22001 575 aa35.25■■■■□ 3.23
SMARCD2-210ENST00000584400 HDGFL1Q5TGJ6 251 aa35.25■■■■□ 3.23
SMARCD2-210ENST00000584400 PRR5LQ6MZQ0 368 aa35.25■■■■□ 3.23
SMARCD2-210ENST00000584400 NBPF5PQ86XG9 351 aaPredicted RBP35.25■■■■□ 3.23
SMARCD2-210ENST00000584400 WWC1Q8IX03 1113 aa35.25■■■■□ 3.23
SMARCD2-210ENST00000584400 BRIP1Q9BX63 1249 aa35.25■■■■□ 3.23
SMARCD2-210ENST00000584400 CHMP4AQ9BY43 222 aa35.25■■■■□ 3.23
SMARCD2-210ENST00000584400 PDE6BP35913 854 aa35.24■■■■□ 3.23
SMARCD2-210ENST00000584400 PDIA6Q15084 440 aa35.24■■■■□ 3.23
SMARCD2-210ENST00000584400 DUSP27Q5VZP5 1158 aa35.24■■■■□ 3.23
SMARCD2-210ENST00000584400 TTLL7Q6ZT98 887 aa35.24■■■■□ 3.23
SMARCD2-210ENST00000584400 NECTIN2Q92692 538 aa35.24■■■■□ 3.23
SMARCD2-210ENST00000584400 DDX21Q9NR30 783 aaKnown RBP eCLIP35.24■■■■□ 3.23
SMARCD2-210ENST00000584400 H0YIN7 160 aa35.23■■■■□ 3.23
SMARCD2-210ENST00000584400 CHRNA5P30532 468 aa35.23■■■■□ 3.23
SMARCD2-210ENST00000584400 HLFQ16534 295 aa35.23■■■■□ 3.23
SMARCD2-210ENST00000584400 DALRD3Q5D0E6 543 aaKnown RBP35.23■■■■□ 3.23
SMARCD2-210ENST00000584400 TPTE2Q6XPS3 522 aa35.23■■■■□ 3.23
SMARCD2-210ENST00000584400 KIAA1551Q9HCM1 1747 aa35.21■■■■□ 3.23
SMARCD2-210ENST00000584400 DBF4Q9UBU7 674 aaPredicted RBP35.21■■■■□ 3.23
SMARCD2-210ENST00000584400 LRP10Q7Z4F1 713 aa35.2■■■■□ 3.23
SMARCD2-210ENST00000584400 C2CD5Q86YS7 1000 aa35.2■■■■□ 3.23
SMARCD2-210ENST00000584400 ZBTB3Q9H5J0 574 aa35.2■■■■□ 3.23
SMARCD2-210ENST00000584400 IL16Q14005 1332 aa35.2■■■■□ 3.23
SMARCD2-210ENST00000584400 N4BP2Q86UW6 1770 aaPredicted RBP35.2■■■■□ 3.23
SMARCD2-210ENST00000584400 AFDNP55196 1824 aaKnown RBP35.2■■■■□ 3.23
SMARCD2-210ENST00000584400 PROSER3Q2NL68 480 aa35.18■■■■□ 3.22
SMARCD2-210ENST00000584400 GIGYF2Q6Y7W6 1299 aaKnown RBP35.17■■■■□ 3.22
SMARCD2-210ENST00000584400 COPS6Q7L5N1 327 aa35.17■■■■□ 3.22
SMARCD2-210ENST00000584400 NYXQ9GZU5 481 aa35.17■■■■□ 3.22
SMARCD2-210ENST00000584400 CHPF2Q9P2E5 772 aa35.17■■■■□ 3.22
SMARCD2-210ENST00000584400 ATP10DQ9P241 1426 aa35.16■■■■□ 3.22
SMARCD2-210ENST00000584400 SENP3-EIF4A1A0A087X0R7 540 aa35.16■■■■□ 3.22
SMARCD2-210ENST00000584400 ANXA1P04083 346 aa35.16■■■■□ 3.22
SMARCD2-210ENST00000584400 GTF2E1P29083 439 aaPredicted RBP35.16■■■■□ 3.22
SMARCD2-210ENST00000584400 WDR63Q8IWG1 891 aa35.16■■■■□ 3.22
SMARCD2-210ENST00000584400 HYPKQ9NX55 129 aa35.15■■■■□ 3.22
SMARCD2-210ENST00000584400 AIMP1Q12904 312 aaKnown RBP35.14■■■■□ 3.22
SMARCD2-210ENST00000584400 HSP90AB3PQ58FF7 597 aa35.14■■■■□ 3.22
SMARCD2-210ENST00000584400 XAGE3Q8WTP9 111 aa35.14■■■■□ 3.22
SMARCD2-210ENST00000584400 CHD4Q14839 1912 aa35.13■■■■□ 3.21
SMARCD2-210ENST00000584400 CCDC24Q8N4L8 307 aa35.13■■■■□ 3.21
SMARCD2-210ENST00000584400 TTLL6Q8N841 843 aa35.13■■■■□ 3.21
SMARCD2-210ENST00000584400 SALL2Q9Y467 1007 aaPredicted RBP35.13■■■■□ 3.21
SMARCD2-210ENST00000584400 ELL2O00472 640 aaPredicted RBP35.12■■■■□ 3.21
SMARCD2-210ENST00000584400 ARHGAP27Q6ZUM4 889 aa35.12■■■■□ 3.21
SMARCD2-210ENST00000584400 FAM177BA6PVY3 158 aa35.11■■■■□ 3.21
SMARCD2-210ENST00000584400 CCER2I3L3R5 266 aa35.1■■■■□ 3.21
SMARCD2-210ENST00000584400 PARP10Q53GL7 1025 aa35.1■■■■□ 3.21
SMARCD2-210ENST00000584400 ZNF34Q8IZ26 560 aa35.1■■■■□ 3.21
SMARCD2-210ENST00000584400 C8orf58Q8NAV2 365 aa35.1■■■■□ 3.21
SMARCD2-210ENST00000584400 GPTP24298 496 aa35.09■■■■□ 3.21
SMARCD2-210ENST00000584400 PPP1R42Q7Z4L9 355 aa35.09■■■■□ 3.21
SMARCD2-210ENST00000584400 TSR2Q969E8 191 aaKnown RBP35.09■■■■□ 3.21
SMARCD2-210ENST00000584400 ZNF622Q969S3 477 aaKnown RBP eCLIP35.09■■■■□ 3.21
SMARCD2-210ENST00000584400 UTRNP46939 3433 aa35.09■■■■□ 3.21
SMARCD2-210ENST00000584400 IBTKQ9P2D0 1353 aaPredicted RBP35.09■■■■□ 3.21
SMARCD2-210ENST00000584400 CCDC30Q5VVM6 783 aa35.08■■■■□ 3.21
SMARCD2-210ENST00000584400 BRCA1P38398 1863 aaKnown RBP35.06■■■■□ 3.2
SMARCD2-210ENST00000584400 STYK1Q6J9G0 422 aa35.06■■■■□ 3.2
SMARCD2-210ENST00000584400 CNKSR1Q969H4 720 aa35.06■■■■□ 3.2
SMARCD2-210ENST00000584400 MASTLQ96GX5 879 aa35.06■■■■□ 3.2
SMARCD2-210ENST00000584400 ANKRD13DQ6ZTN6 518 aa35.05■■■■□ 3.2
SMARCD2-210ENST00000584400 ZNF784Q8NCA9 323 aaPredicted RBP35.05■■■■□ 3.2
SMARCD2-210ENST00000584400 PLBD2Q8NHP8 589 aa35.05■■■■□ 3.2
SMARCD2-210ENST00000584400 GOLGB1Q14789 3259 aaKnown RBP35.05■■■■□ 3.2
SMARCD2-210ENST00000584400 UBN2Q6ZU65 1347 aa35.05■■■■□ 3.2
SMARCD2-210ENST00000584400 SRGNP10124 158 aa35.04■■■■□ 3.2
SMARCD2-210ENST00000584400 TCIRG1Q13488 830 aa35.03■■■■□ 3.2
SMARCD2-210ENST00000584400 SUSD4Q5VX71 490 aa35.03■■■■□ 3.2
SMARCD2-210ENST00000584400 KLRG2A4D1S0 409 aaPredicted RBP35.02■■■■□ 3.2
SMARCD2-210ENST00000584400 NPR1P16066 1061 aa35.01■■■■□ 3.2
SMARCD2-210ENST00000584400 GOLGA2Q08379 1002 aa35.01■■■■□ 3.2
SMARCD2-210ENST00000584400 TWISTNBQ3B726 338 aaPredicted RBP35.01■■■■□ 3.2
SMARCD2-210ENST00000584400 UTP14AQ9BVJ6 771 aaKnown RBP35.01■■■■□ 3.2
SMARCD2-210ENST00000584400 NUP98P52948 1817 aa35.01■■■■□ 3.19
SMARCD2-210ENST00000584400 RNF123Q5XPI4 1314 aa35.01■■■■□ 3.19
SMARCD2-210ENST00000584400 NUTM1Q86Y26 1132 aa35■■■■□ 3.19
SMARCD2-210ENST00000584400 TSPYL6Q8N831 410 aa35■■■■□ 3.19
SMARCD2-210ENST00000584400 STK31Q9BXU1 1019 aa35■■■■□ 3.19
SMARCD2-210ENST00000584400 MYH16Q9H6N6 1097 aa35■■■■□ 3.19
SMARCD2-210ENST00000584400 FANCIQ9NVI1 1328 aa35■■■■□ 3.19
SMARCD2-210ENST00000584400 ERFEQ4G0M1 354 aa34.99■■■■□ 3.19
SMARCD2-210ENST00000584400 DLEC1Q9Y238 1755 aa34.99■■■■□ 3.19
SMARCD2-210ENST00000584400 ARFGEF1Q9Y6D6 1849 aa34.99■■■■□ 3.19
SMARCD2-210ENST00000584400 ANKRD31Q8N7Z5 1873 aa34.99■■■■□ 3.19
SMARCD2-210ENST00000584400 NTSR2O95665 410 aa34.98■■■■□ 3.19
SMARCD2-210ENST00000584400 DDX58O95786 925 aaKnown RBP34.96■■■■□ 3.19
SMARCD2-210ENST00000584400 ALDH1B1P30837 517 aa34.96■■■■□ 3.19
SMARCD2-210ENST00000584400 RIC3Q7Z5B4 369 aa34.96■■■■□ 3.19
SMARCD2-210ENST00000584400 RIC1Q4ADV7 1423 aa34.96■■■■□ 3.19
SMARCD2-210ENST00000584400 SOGA3Q5TF21 947 aa34.95■■■■□ 3.19
SMARCD2-210ENST00000584400 DIEXFQ68CQ4 756 aaKnown RBP34.95■■■■□ 3.19
SMARCD2-210ENST00000584400 NLRP10Q86W26 655 aa34.95■■■■□ 3.19
SMARCD2-210ENST00000584400 PHAXQ9H814 394 aaKnown RBP34.94■■■■□ 3.18
SMARCD2-210ENST00000584400 ABCC12Q96J65 1359 aa34.93■■■■□ 3.18
SMARCD2-210ENST00000584400 PRPF40BQ6NWY9 871 aaKnown RBP34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms