RNA–Protein interactions for RNA: ENST00000584010.5

DDX42-217, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 3,929 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-217ENST00000584010 RAPGEF4Q8WZA2 1011 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 GOLGB1Q14789 3259 aaKnown RBP8.35□□□□□ -1.07
DDX42-217ENST00000584010 PSEN1P49768 467 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 LMOD3Q0VAK6 560 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 CCDC173Q0VFZ6 552 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 ALDH1L2Q3SY69 923 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 KIF3AQ9Y496 699 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 TNNT3P45378 269 aaPredicted RBP8.35□□□□□ -1.07
DDX42-217ENST00000584010 TWISTNBQ3B726 338 aaPredicted RBP8.35□□□□□ -1.07
DDX42-217ENST00000584010 NLGN2Q8NFZ4 835 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 PHACTR3Q96KR7 559 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 ZBTB40Q9NUA8 1239 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 POLKQ9UBT6 870 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 CPSF1Q10570 1443 aaKnown RBP8.35□□□□□ -1.07
DDX42-217ENST00000584010 ERBB3P21860 1342 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 IRX5P78411 483 aaPredicted RBP8.35□□□□□ -1.07
DDX42-217ENST00000584010 ZCRB1Q8TBF4 217 aaKnown RBP8.35□□□□□ -1.07
DDX42-217ENST00000584010 PANK2Q9BZ23 570 aa8.35□□□□□ -1.07
DDX42-217ENST00000584010 MPRIPQ6WCQ1 1025 aa8.34□□□□□ -1.07
DDX42-217ENST00000584010 TIGD1Q96MW7 591 aa8.34□□□□□ -1.07
DDX42-217ENST00000584010 SETQ01105 290 aaPredicted RBP8.34□□□□□ -1.07
DDX42-217ENST00000584010 SLC27A3Q5K4L6 730 aa8.34□□□□□ -1.07
DDX42-217ENST00000584010 SMC5Q8IY18 1101 aa8.34□□□□□ -1.07
DDX42-217ENST00000584010 ZNF592Q92610 1267 aa8.34□□□□□ -1.07
DDX42-217ENST00000584010 DCTN1Q14203 1278 aa8.34□□□□□ -1.08
DDX42-217ENST00000584010 SASS6Q6UVJ0 657 aa8.34□□□□□ -1.08
DDX42-217ENST00000584010 USHBP1Q8N6Y0 703 aa8.34□□□□□ -1.08
DDX42-217ENST00000584010 TSPYL6Q8N831 410 aa8.33□□□□□ -1.08
DDX42-217ENST00000584010 PSMD1Q99460 953 aa8.33□□□□□ -1.08
DDX42-217ENST00000584010 EFCC1Q9HA90 598 aa8.33□□□□□ -1.08
DDX42-217ENST00000584010 TNS1Q9HBL0 1735 aaKnown RBP8.33□□□□□ -1.08
DDX42-217ENST00000584010 MCM4P33991 863 aa8.33□□□□□ -1.08
DDX42-217ENST00000584010 NUCB1Q02818 461 aa8.33□□□□□ -1.08
DDX42-217ENST00000584010 N4BP2Q86UW6 1770 aaPredicted RBP8.33□□□□□ -1.08
DDX42-217ENST00000584010 CEP350Q5VT06 3117 aa8.33□□□□□ -1.08
DDX42-217ENST00000584010 GCC1Q96CN9 775 aa8.33□□□□□ -1.08
DDX42-217ENST00000584010 MBIPQ9NS73 344 aa8.33□□□□□ -1.08
DDX42-217ENST00000584010 ZNF428Q96B54 188 aa8.32□□□□□ -1.08
DDX42-217ENST00000584010 API5Q9BZZ5 524 aaKnown RBP8.32□□□□□ -1.08
DDX42-217ENST00000584010 CALCOCO1Q9P1Z2 691 aa8.32□□□□□ -1.08
DDX42-217ENST00000584010 ITSN1Q15811 1721 aa8.32□□□□□ -1.08
DDX42-217ENST00000584010 NRKQ7Z2Y5 1582 aa8.32□□□□□ -1.08
DDX42-217ENST00000584010 CBX1P83916 185 aa8.32□□□□□ -1.08
DDX42-217ENST00000584010 ERBB4Q15303 1308 aa8.32□□□□□ -1.08
DDX42-217ENST00000584010 BANK1Q8NDB2 785 aa8.32□□□□□ -1.08
DDX42-217ENST00000584010 AK7Q96M32 723 aa8.32□□□□□ -1.08
DDX42-217ENST00000584010 IFT57Q9NWB7 429 aa8.32□□□□□ -1.08
DDX42-217ENST00000584010 DDX11L8A8MPP1 907 aa8.31□□□□□ -1.08
DDX42-217ENST00000584010 TRAK2O60296 914 aa8.31□□□□□ -1.08
DDX42-217ENST00000584010 HSP90AB3PQ58FF7 597 aa8.31□□□□□ -1.08
DDX42-217ENST00000584010 CERS3Q8IU89 383 aa8.31□□□□□ -1.08
DDX42-217ENST00000584010 IP6K1Q92551 441 aa8.31□□□□□ -1.08
DDX42-217ENST00000584010 GBP4Q96PP9 640 aa8.31□□□□□ -1.08
DDX42-217ENST00000584010 VAMP4O75379 141 aa8.31□□□□□ -1.08
DDX42-217ENST00000584010 TATP17735 454 aaPredicted RBP8.31□□□□□ -1.08
DDX42-217ENST00000584010 HS1BP3Q53T59 392 aa8.31□□□□□ -1.08
DDX42-217ENST00000584010 SGIP1Q9BQI5 828 aa8.31□□□□□ -1.08
DDX42-217ENST00000584010 PHRF1Q9P1Y6 1649 aaKnown RBP8.31□□□□□ -1.08
DDX42-217ENST00000584010 SULT6B1Q6IMI4 303 aa8.31□□□□□ -1.08
DDX42-217ENST00000584010 IBTKQ9P2D0 1353 aaPredicted RBP8.3□□□□□ -1.08
DDX42-217ENST00000584010 GOLGA6L22H0YM25 854 aa8.3□□□□□ -1.08
DDX42-217ENST00000584010 NBPF20Q3BBV1 942 aa8.3□□□□□ -1.08
DDX42-217ENST00000584010 TMED8Q6PL24 325 aaPredicted RBP8.3□□□□□ -1.08
DDX42-217ENST00000584010 CASC1Q6TDU7 716 aa8.3□□□□□ -1.08
DDX42-217ENST00000584010 SLC4A10Q6U841 1118 aa8.3□□□□□ -1.08
DDX42-217ENST00000584010 COL23A1Q86Y22 540 aaPredicted RBP8.3□□□□□ -1.08
DDX42-217ENST00000584010 MRPL50Q8N5N7 158 aaKnown RBP8.3□□□□□ -1.08
DDX42-217ENST00000584010 PNPLA7Q6ZV29 1317 aa8.3□□□□□ -1.08
DDX42-217ENST00000584010 CTR9Q6PD62 1173 aa8.3□□□□□ -1.08
DDX42-217ENST00000584010 BMP2KLQ5H9B9 411 aa8.3□□□□□ -1.08
DDX42-217ENST00000584010 C8orf58Q8NAV2 365 aa8.3□□□□□ -1.08
DDX42-217ENST00000584010 ZBTB7BO15156 539 aaPredicted RBP8.29□□□□□ -1.08
DDX42-217ENST00000584010 YBX3P16989 372 aaKnown RBP eCLIP8.29□□□□□ -1.085e-7■□□□□ 8.5
DDX42-217ENST00000584010 OS9Q13438 667 aaPredicted RBP8.29□□□□□ -1.08
DDX42-217ENST00000584010 RTF1Q92541 710 aaKnown RBP8.29□□□□□ -1.08
DDX42-217ENST00000584010 AKT1S1Q96B36 256 aa8.29□□□□□ -1.08
DDX42-217ENST00000584010 CFAP44Q96MT7 982 aa8.29□□□□□ -1.08
DDX42-217ENST00000584010 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
DDX42-217ENST00000584010 CDC45O75419 566 aa8.29□□□□□ -1.08
DDX42-217ENST00000584010 TRIM34Q9BYJ4 488 aa8.29□□□□□ -1.08
DDX42-217ENST00000584010 TNS2Q63HR2 1409 aa8.29□□□□□ -1.08
DDX42-217ENST00000584010 COL3A1P02461 1466 aaPredicted RBP8.29□□□□□ -1.08
DDX42-217ENST00000584010 HMGN5P82970 282 aaKnown RBP8.29□□□□□ -1.08
DDX42-217ENST00000584010 IFFO2Q5TF58 517 aa8.29□□□□□ -1.08
DDX42-217ENST00000584010 TBC1D9Q6ZT07 1266 aa8.29□□□□□ -1.08
DDX42-217ENST00000584010 SMIM5Q71RC9 77 aa8.29□□□□□ -1.08
DDX42-217ENST00000584010 NUP188Q5SRE5 1749 aa8.29□□□□□ -1.08
DDX42-217ENST00000584010 ZBTB22O15209 634 aa8.28□□□□□ -1.08
DDX42-217ENST00000584010 IL13P35225 146 aa8.28□□□□□ -1.08
DDX42-217ENST00000584010 GABPB1Q06547 395 aaPredicted RBP8.28□□□□□ -1.08
DDX42-217ENST00000584010 MAP3K19Q56UN5 1328 aa8.28□□□□□ -1.08
DDX42-217ENST00000584010 FAM43BQ6ZT52 329 aaPredicted RBP8.28□□□□□ -1.08
DDX42-217ENST00000584010 MCM10Q7L590 875 aa8.28□□□□□ -1.08
DDX42-217ENST00000584010 MYCBPQ99417 103 aaPredicted RBP8.28□□□□□ -1.08
DDX42-217ENST00000584010 MCM5P33992 734 aa8.28□□□□□ -1.08
DDX42-217ENST00000584010 ARHGAP45Q92619 1136 aa8.28□□□□□ -1.08
DDX42-217ENST00000584010 CD163L1Q9NR16 1453 aa8.28□□□□□ -1.08
DDX42-217ENST00000584010 HMGB2P26583 209 aaKnown RBP8.28□□□□□ -1.08
DDX42-217ENST00000584010 CALRP27797 417 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms