RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 ASAP1Q9ULH1 1129 aa7.42□□□□□ -1.22
VAPA-207ENST00000583879 FLT4P35916 1363 aa7.42□□□□□ -1.22
VAPA-207ENST00000583879 DOT1LQ8TEK3 1739 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 GNPATO15228 680 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 PPM1GO15355 546 aaPredicted RBP7.41□□□□□ -1.22
VAPA-207ENST00000583879 TOMM70O94826 608 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 MMP10P09238 476 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 MAP3K9P80192 1104 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 ITPK1Q13572 414 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 TRAPPC3LQ5T215 181 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 IFNL2Q8IZJ0 200 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 NLGN1Q8N2Q7 840 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 DNAJC5GQ8N7S2 189 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 ANKK1Q8NFD2 765 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 BBXQ8WY36 941 aaPredicted RBP7.41□□□□□ -1.22
VAPA-207ENST00000583879 EYA1Q99502 592 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 ATG3Q9NT62 314 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 TMOD3Q9NYL9 352 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 EMILIN1Q9Y6C2 1016 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 WASHC2AQ641Q2 1341 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 NSD3Q9BZ95 1437 aa7.41□□□□□ -1.22
VAPA-207ENST00000583879 A0A0G2JLW4 131 aa7.4□□□□□ -1.22
VAPA-207ENST00000583879 PHKG2P15735 406 aa7.4□□□□□ -1.22
VAPA-207ENST00000583879 APLP1P51693 650 aa7.4□□□□□ -1.22
VAPA-207ENST00000583879 DDX27Q96GQ7 796 aaKnown RBP7.4□□□□□ -1.22
VAPA-207ENST00000583879 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.4□□□□□ -1.22
VAPA-207ENST00000583879 RABGEF1Q9UJ41 708 aa7.4□□□□□ -1.22
VAPA-207ENST00000583879 TUBGCP6Q96RT7 1819 aa7.39□□□□□ -1.23
VAPA-207ENST00000583879 PPP1R3GB7ZBB8 358 aa7.39□□□□□ -1.23
VAPA-207ENST00000583879 RC3H1Q5TC82 1133 aaKnown RBP7.39□□□□□ -1.23
VAPA-207ENST00000583879 ARHGAP27Q6ZUM4 889 aa7.39□□□□□ -1.23
VAPA-207ENST00000583879 ARHGEF1Q92888 912 aaKnown RBP7.39□□□□□ -1.23
VAPA-207ENST00000583879 LARP6Q9BRS8 491 aaKnown RBP7.39□□□□□ -1.23
VAPA-207ENST00000583879 POLKQ9UBT6 870 aa7.39□□□□□ -1.23
VAPA-207ENST00000583879 BCS1LQ9Y276 419 aa7.39□□□□□ -1.23
VAPA-207ENST00000583879 RTCBQ9Y3I0 505 aaKnown RBP7.39□□□□□ -1.23
VAPA-207ENST00000583879 ERVV-2B6SEH9 535 aa7.38□□□□□ -1.23
VAPA-207ENST00000583879 DPEP1P16444 411 aa7.38□□□□□ -1.23
VAPA-207ENST00000583879 SLC4A9Q96Q91 983 aa7.38□□□□□ -1.23
VAPA-207ENST00000583879 CCDC87Q9NVE4 849 aa7.38□□□□□ -1.23
VAPA-207ENST00000583879 C4BP0C0L5 1744 aa7.38□□□□□ -1.23
VAPA-207ENST00000583879 NCAPD2Q15021 1401 aa7.37□□□□□ -1.23
VAPA-207ENST00000583879 RPS6KA4O75676 772 aa7.37□□□□□ -1.23
VAPA-207ENST00000583879 FCHSD2O94868 740 aa7.37□□□□□ -1.23
VAPA-207ENST00000583879 ITGBL1O95965 494 aaPredicted RBP7.37□□□□□ -1.23
VAPA-207ENST00000583879 GYS1P13807 737 aa7.37□□□□□ -1.23
VAPA-207ENST00000583879 KCNA3P22001 575 aa7.37□□□□□ -1.23
VAPA-207ENST00000583879 RFC4P35249 363 aa7.37□□□□□ -1.23
VAPA-207ENST00000583879 NMRK2Q9NPI5 230 aa7.37□□□□□ -1.23
VAPA-207ENST00000583879 PARP3Q9Y6F1 533 aa7.37□□□□□ -1.23
VAPA-207ENST00000583879 RGPD2P0DJD1 1756 aa7.37□□□□□ -1.23
VAPA-207ENST00000583879 C5P01031 1676 aa7.37□□□□□ -1.23
VAPA-207ENST00000583879 PXDNLA1KZ92 1463 aa7.36□□□□□ -1.23
VAPA-207ENST00000583879 HSP90AB1P08238 724 aaKnown RBP7.36□□□□□ -1.23
VAPA-207ENST00000583879 EIF4A2Q14240 407 aaKnown RBP7.36□□□□□ -1.23
VAPA-207ENST00000583879 PROX2Q3B8N5 592 aa7.36□□□□□ -1.23
VAPA-207ENST00000583879 NYAP1Q6ZVC0 841 aa7.36□□□□□ -1.23
VAPA-207ENST00000583879 LAPTM4BQ86VI4 370 aa7.36□□□□□ -1.23
VAPA-207ENST00000583879 RBM46Q8TBY0 533 aaKnown RBP7.36□□□□□ -1.23
VAPA-207ENST00000583879 DCAF5Q96JK2 942 aa7.36□□□□□ -1.23
VAPA-207ENST00000583879 PIM2Q9P1W9 311 aa7.36□□□□□ -1.23
VAPA-207ENST00000583879 PCDHGA10Q9Y5H3 936 aa7.36□□□□□ -1.23
VAPA-207ENST00000583879 CNTNAP4Q9C0A0 1308 aa7.35□□□□□ -1.23
VAPA-207ENST00000583879 CABP4P57796 275 aa7.35□□□□□ -1.23
VAPA-207ENST00000583879 FSTL1Q12841 308 aa7.35□□□□□ -1.23
VAPA-207ENST00000583879 PLEKHO1Q53GL0 409 aaPredicted RBP7.35□□□□□ -1.23
VAPA-207ENST00000583879 C9orf131Q5VYM1 1079 aa7.35□□□□□ -1.23
VAPA-207ENST00000583879 C16orf71Q8IYS4 520 aaPredicted RBP7.35□□□□□ -1.23
VAPA-207ENST00000583879 FBXW7Q969H0 707 aa7.35□□□□□ -1.23
VAPA-207ENST00000583879 SOWAHBA6NEL2 793 aa7.34□□□□□ -1.23
VAPA-207ENST00000583879 GTPBP6O43824 516 aaPredicted RBP7.34□□□□□ -1.23
VAPA-207ENST00000583879 TNNT2P45379 298 aaPredicted RBP7.34□□□□□ -1.23
VAPA-207ENST00000583879 MTHFSP49914 203 aa7.34□□□□□ -1.23
VAPA-207ENST00000583879 BCAMP50895 628 aa7.34□□□□□ -1.23
VAPA-207ENST00000583879 AMOTQ4VCS5 1084 aa7.34□□□□□ -1.23
VAPA-207ENST00000583879 DALRD3Q5D0E6 543 aaKnown RBP7.34□□□□□ -1.23
VAPA-207ENST00000583879 Q6ZNB5 142 aa7.34□□□□□ -1.23
VAPA-207ENST00000583879 KLRG1Q96E93 195 aa7.34□□□□□ -1.23
VAPA-207ENST00000583879 TAF1LQ8IZX4 1826 aa7.34□□□□□ -1.24
VAPA-207ENST00000583879 KDRP35968 1356 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 PLEKHG2Q9H7P9 1386 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 KDM2BQ8NHM5 1336 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 TOGARAM1Q9Y4F4 1720 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 PTCD1O75127 700 aaKnown RBP7.33□□□□□ -1.24
VAPA-207ENST00000583879 COL9A1P20849 921 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 TM4SF1P30408 202 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 HTRA3P83110 453 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 MFSD10Q14728 455 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 TYW1BQ6NUM6 668 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 JMYQ8N9B5 988 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 NFATC2IPQ8NCF5 419 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 RRAGCQ9HB90 399 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 EMILIN3Q9NT22 766 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 C10orf71Q711Q0 1435 aa7.33□□□□□ -1.24
VAPA-207ENST00000583879 UBR3Q6ZT12 1888 aa7.32□□□□□ -1.24
VAPA-207ENST00000583879 MAP2P11137 1827 aaKnown RBP7.32□□□□□ -1.24
VAPA-207ENST00000583879 CICQ96RK0 1608 aaPredicted RBP7.32□□□□□ -1.24
VAPA-207ENST00000583879 CHRNA5P30532 468 aa7.32□□□□□ -1.24
VAPA-207ENST00000583879 CRKLP46109 303 aaKnown RBP7.32□□□□□ -1.24
VAPA-207ENST00000583879 KCNC4Q03721 635 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms