RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 SLC4A9Q96Q91 983 aa10.73□□□□□ -0.69
SMCHD1-210ENST00000583800 KDM6AO15550 1401 aaPredicted RBP10.73□□□□□ -0.69
SMCHD1-210ENST00000583800 C10orf71Q711Q0 1435 aa10.73□□□□□ -0.69
SMCHD1-210ENST00000583800 SCN11AQ9UI33 1791 aa10.72□□□□□ -0.69
SMCHD1-210ENST00000583800 ARFGEF1Q9Y6D6 1849 aa10.72□□□□□ -0.69
SMCHD1-210ENST00000583800 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.72□□□□□ -0.69
SMCHD1-210ENST00000583800 ANKRD13DQ6ZTN6 518 aa10.72□□□□□ -0.69
SMCHD1-210ENST00000583800 ZFP91Q96JP5 570 aaPredicted RBP10.72□□□□□ -0.69
SMCHD1-210ENST00000583800 PLEKHG2Q9H7P9 1386 aa10.72□□□□□ -0.69
SMCHD1-210ENST00000583800 RTCBQ9Y3I0 505 aaKnown RBP10.71□□□□□ -0.69
SMCHD1-210ENST00000583800 CNTNAP4Q9C0A0 1308 aa10.7□□□□□ -0.7
SMCHD1-210ENST00000583800 STK25O00506 426 aa10.7□□□□□ -0.7
SMCHD1-210ENST00000583800 KIF3CO14782 793 aa10.7□□□□□ -0.7
SMCHD1-210ENST00000583800 HSPA6P17066 643 aa10.7□□□□□ -0.7
SMCHD1-210ENST00000583800 TRAPPC3LQ5T215 181 aa10.7□□□□□ -0.7
SMCHD1-210ENST00000583800 ZNF530Q6P9A1 599 aaPredicted RBP10.7□□□□□ -0.7
SMCHD1-210ENST00000583800 ARHGEF1Q92888 912 aaKnown RBP10.7□□□□□ -0.7
SMCHD1-210ENST00000583800 DCAF5Q96JK2 942 aa10.7□□□□□ -0.7
SMCHD1-210ENST00000583800 ADAMTS7Q9UKP4 1686 aa10.69□□□□□ -0.7
SMCHD1-210ENST00000583800 A0A0G2JLW4 131 aa10.69□□□□□ -0.7
SMCHD1-210ENST00000583800 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
SMCHD1-210ENST00000583800 ERVV-2B6SEH9 535 aa10.69□□□□□ -0.7
SMCHD1-210ENST00000583800 HSP90AB1P08238 724 aaKnown RBP10.69□□□□□ -0.7
SMCHD1-210ENST00000583800 GYS1P13807 737 aa10.69□□□□□ -0.7
SMCHD1-210ENST00000583800 PLEKHO1Q53GL0 409 aaPredicted RBP10.69□□□□□ -0.7
SMCHD1-210ENST00000583800 AEBP1Q8IUX7 1158 aa10.69□□□□□ -0.7
SMCHD1-210ENST00000583800 PANK3Q9H999 370 aa10.69□□□□□ -0.7
SMCHD1-210ENST00000583800 BCS1LQ9Y276 419 aa10.69□□□□□ -0.7
SMCHD1-210ENST00000583800 RPS6KA4O75676 772 aa10.68□□□□□ -0.7
SMCHD1-210ENST00000583800 HSPA5P11021 654 aaKnown RBP10.68□□□□□ -0.7
SMCHD1-210ENST00000583800 CABP4P57796 275 aa10.68□□□□□ -0.7
SMCHD1-210ENST00000583800 TGFB2P61812 414 aa10.68□□□□□ -0.7
SMCHD1-210ENST00000583800 RC3H1Q5TC82 1133 aaKnown RBP10.68□□□□□ -0.7
SMCHD1-210ENST00000583800 NLGN1Q8N2Q7 840 aa10.68□□□□□ -0.7
SMCHD1-210ENST00000583800 AFDNP55196 1824 aaKnown RBP10.68□□□□□ -0.7
SMCHD1-210ENST00000583800 PTCD1O75127 700 aaKnown RBP10.67□□□□□ -0.7
SMCHD1-210ENST00000583800 DPEP1P16444 411 aa10.67□□□□□ -0.7
SMCHD1-210ENST00000583800 RFC4P35249 363 aa10.67□□□□□ -0.7
SMCHD1-210ENST00000583800 AMOTQ4VCS5 1084 aa10.67□□□□□ -0.7
SMCHD1-210ENST00000583800 IFFO2Q5TF58 517 aa10.67□□□□□ -0.7
SMCHD1-210ENST00000583800 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMCHD1-210ENST00000583800 KHSRPQ92945 711 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMCHD1-210ENST00000583800 PCGF6Q9BYE7 350 aa10.67□□□□□ -0.7
SMCHD1-210ENST00000583800 CCDC87Q9NVE4 849 aa10.67□□□□□ -0.7
SMCHD1-210ENST00000583800 SBF1O95248 1867 aa10.67□□□□□ -0.7
SMCHD1-210ENST00000583800 MTHFSP49914 203 aa10.66□□□□□ -0.7
SMCHD1-210ENST00000583800 BRPF1P55201 1214 aaPredicted RBP10.66□□□□□ -0.7
SMCHD1-210ENST00000583800 EIF4G2P78344 907 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMCHD1-210ENST00000583800 LSM11P83369 360 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMCHD1-210ENST00000583800 C1orf141Q5JVX7 400 aa10.66□□□□□ -0.7
SMCHD1-210ENST00000583800 SRP68Q9UHB9 627 aaKnown RBP10.66□□□□□ -0.7
SMCHD1-210ENST00000583800 STK24Q9Y6E0 443 aa10.66□□□□□ -0.7
SMCHD1-210ENST00000583800 PARP3Q9Y6F1 533 aa10.66□□□□□ -0.7
SMCHD1-210ENST00000583800 WDR90Q96KV7 1748 aa10.66□□□□□ -0.7
SMCHD1-210ENST00000583800 CLSPNQ9HAW4 1339 aa10.65□□□□□ -0.7
SMCHD1-210ENST00000583800 FCHSD2O94868 740 aa10.65□□□□□ -0.7
SMCHD1-210ENST00000583800 CRKLP46109 303 aaKnown RBP10.65□□□□□ -0.7
SMCHD1-210ENST00000583800 SULT6B1Q6IMI4 303 aa10.65□□□□□ -0.7
SMCHD1-210ENST00000583800 ARHGAP27Q6ZUM4 889 aa10.65□□□□□ -0.7
SMCHD1-210ENST00000583800 MORC1Q86VD1 984 aa10.65□□□□□ -0.7
SMCHD1-210ENST00000583800 NFATC2IPQ8NCF5 419 aa10.65□□□□□ -0.7
SMCHD1-210ENST00000583800 DLEC1Q9Y238 1755 aa10.65□□□□□ -0.71
SMCHD1-210ENST00000583800 USP42Q9H9J4 1324 aaKnown RBP10.64□□□□□ -0.71
SMCHD1-210ENST00000583800 KCNA3P22001 575 aa10.64□□□□□ -0.71
SMCHD1-210ENST00000583800 DDR1Q08345 913 aa10.64□□□□□ -0.71
SMCHD1-210ENST00000583800 NMRK2Q9NPI5 230 aa10.64□□□□□ -0.71
SMCHD1-210ENST00000583800 CCDC88AQ3V6T2 1871 aa10.64□□□□□ -0.71
SMCHD1-210ENST00000583800 MRC1P22897 1456 aa10.63□□□□□ -0.71
SMCHD1-210ENST00000583800 UBR2Q8IWV8 1755 aa10.63□□□□□ -0.71
SMCHD1-210ENST00000583800 IL13P35225 146 aa10.63□□□□□ -0.71
SMCHD1-210ENST00000583800 NRXN2Q9P2S2 1712 aa10.63□□□□□ -0.71
SMCHD1-210ENST00000583800 KCPQ6ZWJ8 1503 aa10.63□□□□□ -0.71
SMCHD1-210ENST00000583800 TNRC6CQ9HCJ0 1690 aaKnown RBP10.63□□□□□ -0.71
SMCHD1-210ENST00000583800 TOMM70O94826 608 aa10.62□□□□□ -0.71
SMCHD1-210ENST00000583800 C9orf131Q5VYM1 1079 aa10.62□□□□□ -0.71
SMCHD1-210ENST00000583800 DNAJC10Q8IXB1 793 aa10.62□□□□□ -0.71
SMCHD1-210ENST00000583800 POLRMTO00411 1230 aaKnown RBP10.61□□□□□ -0.71
SMCHD1-210ENST00000583800 CHRNA5P30532 468 aa10.61□□□□□ -0.71
SMCHD1-210ENST00000583800 APLP1P51693 650 aa10.61□□□□□ -0.71
SMCHD1-210ENST00000583800 AKAP4Q5JQC9 854 aa10.61□□□□□ -0.71
SMCHD1-210ENST00000583800 USPL1Q5W0Q7 1092 aa10.61□□□□□ -0.71
SMCHD1-210ENST00000583800 INTS5Q6P9B9 1019 aaKnown RBP10.61□□□□□ -0.71
SMCHD1-210ENST00000583800 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
SMCHD1-210ENST00000583800 PIM2Q9P1W9 311 aa10.61□□□□□ -0.71
SMCHD1-210ENST00000583800 KNSTRNQ9Y448 316 aa10.61□□□□□ -0.71
SMCHD1-210ENST00000583800 TIAM2Q8IVF5 1701 aa10.61□□□□□ -0.71
SMCHD1-210ENST00000583800 SLC39A6Q13433 755 aa10.6□□□□□ -0.71
SMCHD1-210ENST00000583800 DALRD3Q5D0E6 543 aaKnown RBP10.6□□□□□ -0.71
SMCHD1-210ENST00000583800 SLC52A2Q9HAB3 445 aa10.6□□□□□ -0.71
SMCHD1-210ENST00000583800 LGR6Q9HBX8 967 aa10.6□□□□□ -0.71
SMCHD1-210ENST00000583800 SOS1Q07889 1333 aaPredicted RBP10.59□□□□□ -0.71
SMCHD1-210ENST00000583800 ANKRD31Q8N7Z5 1873 aa10.59□□□□□ -0.71
SMCHD1-210ENST00000583800 HMOX1P09601 288 aa10.59□□□□□ -0.71
SMCHD1-210ENST00000583800 RNF181Q9P0P0 153 aa10.59□□□□□ -0.71
SMCHD1-210ENST00000583800 ZBTB1Q9Y2K1 713 aa10.59□□□□□ -0.71
SMCHD1-210ENST00000583800 COL15A1P39059 1388 aa10.59□□□□□ -0.71
SMCHD1-210ENST00000583800 SCN7AQ01118 1682 aa10.59□□□□□ -0.71
SMCHD1-210ENST00000583800 SIPA1L3O60292 1781 aaPredicted RBP10.59□□□□□ -0.71
SMCHD1-210ENST00000583800 CACNA1SQ13698 1873 aa10.59□□□□□ -0.71
SMCHD1-210ENST00000583800 RNMTO43148 476 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms