RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
SMARCE1-218ENST00000582955 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
SMARCE1-218ENST00000582955 CLEC4GQ6UXB4 293 aa16.35■□□□□ 0.21
SMARCE1-218ENST00000582955 TTLL7Q6ZT98 887 aa16.35■□□□□ 0.21
SMARCE1-218ENST00000582955 AFDNP55196 1824 aaKnown RBP16.35■□□□□ 0.21
SMARCE1-218ENST00000582955 N4BP2Q86UW6 1770 aaPredicted RBP16.34■□□□□ 0.21
SMARCE1-218ENST00000582955 CCER2I3L3R5 266 aa16.34■□□□□ 0.21
SMARCE1-218ENST00000582955 DPEP1P16444 411 aa16.34■□□□□ 0.21
SMARCE1-218ENST00000582955 YBX3P16989 372 aaKnown RBP eCLIP16.34■□□□□ 0.212e-7■■□□□ 12.5
SMARCE1-218ENST00000582955 PDIA6Q15084 440 aa16.34■□□□□ 0.21
SMARCE1-218ENST00000582955 HLFQ16534 295 aa16.34■□□□□ 0.21
SMARCE1-218ENST00000582955 PROSER3Q2NL68 480 aa16.34■□□□□ 0.21
SMARCE1-218ENST00000582955 DIEXFQ68CQ4 756 aaKnown RBP16.34■□□□□ 0.21
SMARCE1-218ENST00000582955 TSR2Q969E8 191 aaKnown RBP16.34■□□□□ 0.21
SMARCE1-218ENST00000582955 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
SMARCE1-218ENST00000582955 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
SMARCE1-218ENST00000582955 NRXN2Q9P2S2 1712 aa16.33■□□□□ 0.21
SMARCE1-218ENST00000582955 GOLGB1Q14789 3259 aaKnown RBP16.33■□□□□ 0.2
SMARCE1-218ENST00000582955 ELL2O00472 640 aaPredicted RBP16.33■□□□□ 0.2
SMARCE1-218ENST00000582955 CHPF2Q9P2E5 772 aa16.33■□□□□ 0.2
SMARCE1-218ENST00000582955 NIP7Q9Y221 180 aaKnown RBP eCLIP16.33■□□□□ 0.2
SMARCE1-218ENST00000582955 KIAA1551Q9HCM1 1747 aa16.33■□□□□ 0.2
SMARCE1-218ENST00000582955 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
SMARCE1-218ENST00000582955 RGL2O15211 777 aa16.32■□□□□ 0.2
SMARCE1-218ENST00000582955 UTRNP46939 3433 aa16.32■□□□□ 0.2
SMARCE1-218ENST00000582955 AIMP1Q12904 312 aaKnown RBP16.32■□□□□ 0.2
SMARCE1-218ENST00000582955 IL16Q14005 1332 aa16.32■□□□□ 0.2
SMARCE1-218ENST00000582955 CNBD1Q8NA66 436 aa16.32■□□□□ 0.2
SMARCE1-218ENST00000582955 DDX21Q9NR30 783 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMARCE1-218ENST00000582955 GRIN3BO60391 1043 aa16.31■□□□□ 0.2
SMARCE1-218ENST00000582955 CHRNA5P30532 468 aa16.31■□□□□ 0.2
SMARCE1-218ENST00000582955 PRR5LQ6MZQ0 368 aa16.31■□□□□ 0.2
SMARCE1-218ENST00000582955 LRP10Q7Z4F1 713 aa16.31■□□□□ 0.2
SMARCE1-218ENST00000582955 NBPF5PQ86XG9 351 aaPredicted RBP16.31■□□□□ 0.2
SMARCE1-218ENST00000582955 CCDC24Q8N4L8 307 aa16.31■□□□□ 0.2
SMARCE1-218ENST00000582955 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
SMARCE1-218ENST00000582955 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
SMARCE1-218ENST00000582955 ST5P78524 1137 aa16.3■□□□□ 0.2
SMARCE1-218ENST00000582955 COPS6Q7L5N1 327 aa16.3■□□□□ 0.2
SMARCE1-218ENST00000582955 WDR63Q8IWG1 891 aa16.3■□□□□ 0.2
SMARCE1-218ENST00000582955 XAGE3Q8WTP9 111 aa16.3■□□□□ 0.2
SMARCE1-218ENST00000582955 DBF4Q9UBU7 674 aaPredicted RBP16.3■□□□□ 0.2
SMARCE1-218ENST00000582955 BCS1LQ9Y276 419 aa16.3■□□□□ 0.2
SMARCE1-218ENST00000582955 GPTP24298 496 aa16.29■□□□□ 0.2
SMARCE1-218ENST00000582955 YY1P25490 414 aa16.29■□□□□ 0.2
SMARCE1-218ENST00000582955 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
SMARCE1-218ENST00000582955 PIM2Q9P1W9 311 aa16.29■□□□□ 0.2
SMARCE1-218ENST00000582955 KCNA3P22001 575 aa16.28■□□□□ 0.2
SMARCE1-218ENST00000582955 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
SMARCE1-218ENST00000582955 C2CD5Q86YS7 1000 aa16.28■□□□□ 0.2
SMARCE1-218ENST00000582955 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
SMARCE1-218ENST00000582955 NUP98P52948 1817 aa16.28■□□□□ 0.2
SMARCE1-218ENST00000582955 ATP10DQ9P241 1426 aa16.28■□□□□ 0.2
SMARCE1-218ENST00000582955 FANCIQ9NVI1 1328 aa16.27■□□□□ 0.2
SMARCE1-218ENST00000582955 H0YIN7 160 aa16.27■□□□□ 0.2
SMARCE1-218ENST00000582955 GTF2E1P29083 439 aaPredicted RBP16.27■□□□□ 0.2
SMARCE1-218ENST00000582955 TPTE2Q6XPS3 522 aa16.27■□□□□ 0.2
SMARCE1-218ENST00000582955 BRIP1Q9BX63 1249 aa16.27■□□□□ 0.2
SMARCE1-218ENST00000582955 CHMP4AQ9BY43 222 aa16.27■□□□□ 0.2
SMARCE1-218ENST00000582955 HYPKQ9NX55 129 aa16.27■□□□□ 0.2
SMARCE1-218ENST00000582955 PDE6BP35913 854 aa16.26■□□□□ 0.19
SMARCE1-218ENST00000582955 TWISTNBQ3B726 338 aaPredicted RBP16.26■□□□□ 0.19
SMARCE1-218ENST00000582955 DALRD3Q5D0E6 543 aaKnown RBP16.26■□□□□ 0.19
SMARCE1-218ENST00000582955 CCDC30Q5VVM6 783 aa16.26■□□□□ 0.19
SMARCE1-218ENST00000582955 MIER1Q8N108 512 aa16.26■□□□□ 0.19
SMARCE1-218ENST00000582955 BRCA1P38398 1863 aaKnown RBP16.25■□□□□ 0.19
SMARCE1-218ENST00000582955 ANKRD31Q8N7Z5 1873 aa16.25■□□□□ 0.19
SMARCE1-218ENST00000582955 GOLGA2Q08379 1002 aa16.25■□□□□ 0.19
SMARCE1-218ENST00000582955 NYXQ9GZU5 481 aa16.25■□□□□ 0.19
SMARCE1-218ENST00000582955 MYH16Q9H6N6 1097 aa16.25■□□□□ 0.19
SMARCE1-218ENST00000582955 UBN2Q6ZU65 1347 aa16.24■□□□□ 0.19
SMARCE1-218ENST00000582955 CHD4Q14839 1912 aa16.24■□□□□ 0.19
SMARCE1-218ENST00000582955 HSP90AB3PQ58FF7 597 aa16.24■□□□□ 0.19
SMARCE1-218ENST00000582955 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
SMARCE1-218ENST00000582955 ZNF622Q969S3 477 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMARCE1-218ENST00000582955 SPINK5Q9NQ38 1064 aaPredicted RBP16.24■□□□□ 0.19
SMARCE1-218ENST00000582955 PDZRN3Q9UPQ7 1066 aa16.24■□□□□ 0.19
SMARCE1-218ENST00000582955 TCERG1O14776 1098 aaKnown RBP16.23■□□□□ 0.19
SMARCE1-218ENST00000582955 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
SMARCE1-218ENST00000582955 SUSD4Q5VX71 490 aa16.23■□□□□ 0.19
SMARCE1-218ENST00000582955 ANKRD13DQ6ZTN6 518 aa16.23■□□□□ 0.19
SMARCE1-218ENST00000582955 NUTM1Q86Y26 1132 aa16.23■□□□□ 0.19
SMARCE1-218ENST00000582955 PLBD2Q8NHP8 589 aa16.23■□□□□ 0.19
SMARCE1-218ENST00000582955 STK31Q9BXU1 1019 aa16.23■□□□□ 0.19
SMARCE1-218ENST00000582955 PHAXQ9H814 394 aaKnown RBP16.23■□□□□ 0.19
SMARCE1-218ENST00000582955 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
SMARCE1-218ENST00000582955 ARHGAP27Q6ZUM4 889 aa16.22■□□□□ 0.19
SMARCE1-218ENST00000582955 PPP1R42Q7Z4L9 355 aa16.22■□□□□ 0.19
SMARCE1-218ENST00000582955 TTLL6Q8N841 843 aa16.22■□□□□ 0.19
SMARCE1-218ENST00000582955 DLEC1Q9Y238 1755 aa16.22■□□□□ 0.19
SMARCE1-218ENST00000582955 COL11A2P13942 1736 aaPredicted RBP16.22■□□□□ 0.19
SMARCE1-218ENST00000582955 ZNF521Q96K83 1311 aa16.21■□□□□ 0.19
SMARCE1-218ENST00000582955 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.19
SMARCE1-218ENST00000582955 TCIRG1Q13488 830 aa16.21■□□□□ 0.19
SMARCE1-218ENST00000582955 ERFEQ4G0M1 354 aa16.21■□□□□ 0.19
SMARCE1-218ENST00000582955 RIC3Q7Z5B4 369 aa16.21■□□□□ 0.19
SMARCE1-218ENST00000582955 ABCC12Q96J65 1359 aa16.21■□□□□ 0.19
SMARCE1-218ENST00000582955 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.19
SMARCE1-218ENST00000582955 ARFGEF1Q9Y6D6 1849 aa16.2■□□□□ 0.18
SMARCE1-218ENST00000582955 NTSR2O95665 410 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms