RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 HCLS1P14317 486 aaPredicted RBP16.45■□□□□ 0.22
RNF43-205ENST00000581868 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
RNF43-205ENST00000581868 MPRIPQ6WCQ1 1025 aa16.45■□□□□ 0.22
RNF43-205ENST00000581868 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
RNF43-205ENST00000581868 CACNA1FO60840 1977 aa16.45■□□□□ 0.22
RNF43-205ENST00000581868 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
RNF43-205ENST00000581868 TMEM87AQ8NBN3 555 aa16.45■□□□□ 0.22
RNF43-205ENST00000581868 GJB2P29033 226 aa16.44■□□□□ 0.22
RNF43-205ENST00000581868 PDRG1Q9NUG6 133 aa16.44■□□□□ 0.22
RNF43-205ENST00000581868 HYPKQ9NX55 129 aa16.44■□□□□ 0.22
RNF43-205ENST00000581868 UBE2HP62256 183 aa16.44■□□□□ 0.22
RNF43-205ENST00000581868 PLCB2Q00722 1185 aa16.44■□□□□ 0.22
RNF43-205ENST00000581868 RUFY2Q8WXA3 655 aa16.44■□□□□ 0.22
RNF43-205ENST00000581868 RBM33Q96EV2 1170 aaKnown RBP16.44■□□□□ 0.22
RNF43-205ENST00000581868 CEMIPQ8WUJ3 1361 aa16.43■□□□□ 0.22
RNF43-205ENST00000581868 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
RNF43-205ENST00000581868 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
RNF43-205ENST00000581868 ZNF530Q6P9A1 599 aaPredicted RBP16.43■□□□□ 0.22
RNF43-205ENST00000581868 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
RNF43-205ENST00000581868 LRRC59Q96AG4 307 aaKnown RBP16.43■□□□□ 0.22
RNF43-205ENST00000581868 TTC41PQ6P2S7 1318 aa16.43■□□□□ 0.22
RNF43-205ENST00000581868 DNM1Q05193 864 aaKnown RBP16.43■□□□□ 0.22
RNF43-205ENST00000581868 ECHDC1Q9NTX5 307 aa16.43■□□□□ 0.22
RNF43-205ENST00000581868 MAP3K2Q9Y2U5 619 aa16.43■□□□□ 0.22
RNF43-205ENST00000581868 ADCY9O60503 1353 aa16.43■□□□□ 0.22
RNF43-205ENST00000581868 ADCY5O95622 1261 aa16.42■□□□□ 0.22
RNF43-205ENST00000581868 DNTTIP2Q5QJE6 756 aaKnown RBP16.42■□□□□ 0.22
RNF43-205ENST00000581868 GIMAP6Q6P9H5 292 aa16.42■□□□□ 0.22
RNF43-205ENST00000581868 IP6K1Q92551 441 aa16.42■□□□□ 0.22
RNF43-205ENST00000581868 ATP6V1DQ9Y5K8 247 aa16.42■□□□□ 0.22
RNF43-205ENST00000581868 SETD1BQ9UPS6 1966 aaKnown RBP16.42■□□□□ 0.22
RNF43-205ENST00000581868 VPS37CA5D8V6 355 aaPredicted RBP16.42■□□□□ 0.22
RNF43-205ENST00000581868 CWF19L2Q2TBE0 894 aaKnown RBP16.42■□□□□ 0.22
RNF43-205ENST00000581868 UVSSAQ2YD98 709 aa16.42■□□□□ 0.22
RNF43-205ENST00000581868 NECAB1Q8N987 351 aa16.42■□□□□ 0.22
RNF43-205ENST00000581868 CYP46A1Q9Y6A2 500 aa16.42■□□□□ 0.22
RNF43-205ENST00000581868 KCNJ4P48050 445 aa16.41■□□□□ 0.22
RNF43-205ENST00000581868 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
RNF43-205ENST00000581868 AACSQ86V21 672 aa16.41■□□□□ 0.22
RNF43-205ENST00000581868 HOXB7P09629 217 aa16.41■□□□□ 0.22
RNF43-205ENST00000581868 THEMISQ8N1K5 641 aaPredicted RBP16.41■□□□□ 0.22
RNF43-205ENST00000581868 USP42Q9H9J4 1324 aaKnown RBP16.41■□□□□ 0.22
RNF43-205ENST00000581868 LETM1O95202 739 aaPredicted RBP16.4■□□□□ 0.22
RNF43-205ENST00000581868 SASS6Q6UVJ0 657 aa16.4■□□□□ 0.22
RNF43-205ENST00000581868 GPATCH3Q96I76 525 aa16.4■□□□□ 0.22
RNF43-205ENST00000581868 TTC12Q9H892 705 aaPredicted RBP16.4■□□□□ 0.22
RNF43-205ENST00000581868 DBF4Q9UBU7 674 aaPredicted RBP16.4■□□□□ 0.22
RNF43-205ENST00000581868 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
RNF43-205ENST00000581868 VPS53Q5VIR6 699 aa16.4■□□□□ 0.22
RNF43-205ENST00000581868 MTMR6Q9Y217 621 aa16.4■□□□□ 0.22
RNF43-205ENST00000581868 N4BP2Q86UW6 1770 aaPredicted RBP16.39■□□□□ 0.22
RNF43-205ENST00000581868 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
RNF43-205ENST00000581868 CHMP4AQ9BY43 222 aa16.39■□□□□ 0.21
RNF43-205ENST00000581868 ANKARQ7Z5J8 1434 aa16.39■□□□□ 0.21
RNF43-205ENST00000581868 ME3Q16798 604 aa16.39■□□□□ 0.21
RNF43-205ENST00000581868 C17orf53Q8N3J3 647 aaPredicted RBP16.39■□□□□ 0.21
RNF43-205ENST00000581868 FAM227BQ96M60 508 aa16.39■□□□□ 0.21
RNF43-205ENST00000581868 ARID3AQ99856 593 aa16.39■□□□□ 0.21
RNF43-205ENST00000581868 CCDC8Q9H0W5 538 aaPredicted RBP16.39■□□□□ 0.21
RNF43-205ENST00000581868 ZSWIM6Q9HCJ5 1215 aa16.39■□□□□ 0.21
RNF43-205ENST00000581868 CHMP3Q9Y3E7 222 aa16.39■□□□□ 0.21
RNF43-205ENST00000581868 ZKSCAN1P17029 563 aaPredicted RBP16.38■□□□□ 0.21
RNF43-205ENST00000581868 AKAP4Q5JQC9 854 aa16.38■□□□□ 0.21
RNF43-205ENST00000581868 ZMYND15Q9H091 742 aa16.38■□□□□ 0.21
RNF43-205ENST00000581868 RBM8AQ9Y5S9 174 aaKnown RBP16.38■□□□□ 0.21
RNF43-205ENST00000581868 AIMP1Q12904 312 aaKnown RBP16.38■□□□□ 0.21
RNF43-205ENST00000581868 MTX1Q13505 466 aa16.38■□□□□ 0.21
RNF43-205ENST00000581868 PLEKHO1Q53GL0 409 aaPredicted RBP16.38■□□□□ 0.21
RNF43-205ENST00000581868 EVI5LQ96CN4 794 aa16.38■□□□□ 0.21
RNF43-205ENST00000581868 ZSCAN31Q96LW9 406 aaPredicted RBP16.38■□□□□ 0.21
RNF43-205ENST00000581868 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.38■□□□□ 0.21
RNF43-205ENST00000581868 ST3GAL1Q11201 340 aa16.37■□□□□ 0.21
RNF43-205ENST00000581868 NECTIN1Q15223 517 aa16.37■□□□□ 0.21
RNF43-205ENST00000581868 CCDC171Q6TFL3 1326 aa16.37■□□□□ 0.21
RNF43-205ENST00000581868 KDM4AO75164 1064 aa16.37■□□□□ 0.21
RNF43-205ENST00000581868 NMIQ13287 307 aaPredicted RBP16.37■□□□□ 0.21
RNF43-205ENST00000581868 COL9A3Q14050 684 aaPredicted RBP16.37■□□□□ 0.21
RNF43-205ENST00000581868 CREB3L3Q68CJ9 461 aa16.37■□□□□ 0.21
RNF43-205ENST00000581868 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
RNF43-205ENST00000581868 FERMT3Q86UX7 667 aa16.37■□□□□ 0.21
RNF43-205ENST00000581868 TCEANC2Q96MN5 208 aa16.37■□□□□ 0.21
RNF43-205ENST00000581868 SIL1Q9H173 461 aa16.37■□□□□ 0.21
RNF43-205ENST00000581868 SH2B1Q9NRF2 756 aaPredicted RBP16.37■□□□□ 0.21
RNF43-205ENST00000581868 MARF1Q9Y4F3 1742 aaKnown RBP16.37■□□□□ 0.21
RNF43-205ENST00000581868 SLIT1O75093 1534 aa16.37■□□□□ 0.21
RNF43-205ENST00000581868 PSME1Q06323 249 aa16.36■□□□□ 0.21
RNF43-205ENST00000581868 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
RNF43-205ENST00000581868 ERC1Q8IUD2 1116 aa16.36■□□□□ 0.21
RNF43-205ENST00000581868 TPCN1Q9ULQ1 816 aa16.36■□□□□ 0.21
RNF43-205ENST00000581868 ARHGAP23Q9P227 1491 aa16.36■□□□□ 0.21
RNF43-205ENST00000581868 DYNC1I1O14576 645 aa16.36■□□□□ 0.21
RNF43-205ENST00000581868 RNMTO43148 476 aaKnown RBP16.36■□□□□ 0.21
RNF43-205ENST00000581868 ALDH1L1O75891 902 aa16.36■□□□□ 0.21
RNF43-205ENST00000581868 LARP1BQ659C4 914 aaKnown RBP16.36■□□□□ 0.21
RNF43-205ENST00000581868 SUCLG2Q96I99 432 aa16.36■□□□□ 0.21
RNF43-205ENST00000581868 TM6SF1Q9BZW5 370 aa16.36■□□□□ 0.21
RNF43-205ENST00000581868 GIGYF1O75420 1035 aaPredicted RBP16.35■□□□□ 0.21
RNF43-205ENST00000581868 G3BP1Q13283 466 aaKnown RBP eCLIP16.35■□□□□ 0.21
RNF43-205ENST00000581868 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
RNF43-205ENST00000581868 FAM173BQ6P4H8 233 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms