RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 BRIP1Q9BX63 1249 aa25.47■■□□□ 1.67
SREBF1-220ENST00000581707 H0YIN7 160 aa25.46■■□□□ 1.67
SREBF1-220ENST00000581707 CCDC24Q8N4L8 307 aa25.46■■□□□ 1.67
SREBF1-220ENST00000581707 PDE6BP35913 854 aa25.45■■□□□ 1.66
SREBF1-220ENST00000581707 HLFQ16534 295 aa25.45■■□□□ 1.66
SREBF1-220ENST00000581707 NIP7Q9Y221 180 aaKnown RBP eCLIP25.45■■□□□ 1.66
SREBF1-220ENST00000581707 ANKRD31Q8N7Z5 1873 aa25.45■■□□□ 1.66
SREBF1-220ENST00000581707 ERVV-1B6SEH8 477 aa25.44■■□□□ 1.66
SREBF1-220ENST00000581707 KIF6Q6ZMV9 814 aa25.44■■□□□ 1.66
SREBF1-220ENST00000581707 TTLL7Q6ZT98 887 aa25.44■■□□□ 1.66
SREBF1-220ENST00000581707 NBPF5PQ86XG9 351 aaPredicted RBP25.44■■□□□ 1.66
SREBF1-220ENST00000581707 CFAP44Q96MT7 982 aa25.44■■□□□ 1.66
SREBF1-220ENST00000581707 MRS2Q9HD23 443 aa25.44■■□□□ 1.66
SREBF1-220ENST00000581707 MAP3K15Q6ZN16 1313 aa25.43■■□□□ 1.66
SREBF1-220ENST00000581707 ST5P78524 1137 aa25.43■■□□□ 1.66
SREBF1-220ENST00000581707 PDZRN3Q9UPQ7 1066 aa25.43■■□□□ 1.66
SREBF1-220ENST00000581707 DLEC1Q9Y238 1755 aa25.43■■□□□ 1.66
SREBF1-220ENST00000581707 CALD1Q05682 793 aaKnown RBP25.42■■□□□ 1.66
SREBF1-220ENST00000581707 PDIA6Q15084 440 aa25.42■■□□□ 1.66
SREBF1-220ENST00000581707 KRT24Q2M2I5 525 aa25.42■■□□□ 1.66
SREBF1-220ENST00000581707 TTLL6Q8N841 843 aa25.42■■□□□ 1.66
SREBF1-220ENST00000581707 NECTIN2Q92692 538 aa25.41■■□□□ 1.66
SREBF1-220ENST00000581707 NUP98P52948 1817 aa25.41■■□□□ 1.66
SREBF1-220ENST00000581707 TPTE2Q6XPS3 522 aa25.4■■□□□ 1.66
SREBF1-220ENST00000581707 ZBTB3Q9H5J0 574 aa25.4■■□□□ 1.66
SREBF1-220ENST00000581707 ATP10DQ9P241 1426 aa25.39■■□□□ 1.66
SREBF1-220ENST00000581707 ZNF853P0CG23 659 aa25.39■■□□□ 1.66
SREBF1-220ENST00000581707 LRP10Q7Z4F1 713 aa25.39■■□□□ 1.66
SREBF1-220ENST00000581707 ZNF622Q969S3 477 aaKnown RBP eCLIP25.39■■□□□ 1.663e-6■■□□□ 13.5
SREBF1-220ENST00000581707 MBIPQ9NS73 344 aa25.39■■□□□ 1.66
SREBF1-220ENST00000581707 ADCY9O60503 1353 aa25.39■■□□□ 1.65
SREBF1-220ENST00000581707 FAM177BA6PVY3 158 aa25.38■■□□□ 1.65
SREBF1-220ENST00000581707 ANXA1P04083 346 aa25.38■■□□□ 1.65
SREBF1-220ENST00000581707 PROSER3Q2NL68 480 aa25.38■■□□□ 1.65
SREBF1-220ENST00000581707 IFT57Q9NWB7 429 aa25.38■■□□□ 1.65
SREBF1-220ENST00000581707 GNAI1P63096 354 aa25.37■■□□□ 1.65
SREBF1-220ENST00000581707 HOXB7P09629 217 aa25.36■■□□□ 1.65
SREBF1-220ENST00000581707 DDX21Q9NR30 783 aaKnown RBP eCLIP25.36■■□□□ 1.65
SREBF1-220ENST00000581707 COL11A2P13942 1736 aaPredicted RBP25.35■■□□□ 1.65
SREBF1-220ENST00000581707 GTF2E1P29083 439 aaPredicted RBP25.35■■□□□ 1.65
SREBF1-220ENST00000581707 GIGYF2Q6Y7W6 1299 aaKnown RBP25.35■■□□□ 1.65
SREBF1-220ENST00000581707 SRGNP10124 158 aa25.34■■□□□ 1.65
SREBF1-220ENST00000581707 GPTP24298 496 aa25.34■■□□□ 1.65
SREBF1-220ENST00000581707 HDGFL1Q5TGJ6 251 aa25.34■■□□□ 1.65
SREBF1-220ENST00000581707 DUSP27Q5VZP5 1158 aa25.34■■□□□ 1.65
SREBF1-220ENST00000581707 NYXQ9GZU5 481 aa25.34■■□□□ 1.65
SREBF1-220ENST00000581707 SENP3-EIF4A1A0A087X0R7 540 aa25.33■■□□□ 1.65
SREBF1-220ENST00000581707 STYK1Q6J9G0 422 aa25.33■■□□□ 1.65
SREBF1-220ENST00000581707 COPS6Q7L5N1 327 aa25.33■■□□□ 1.65
SREBF1-220ENST00000581707 MASTLQ96GX5 879 aa25.33■■□□□ 1.65
SREBF1-220ENST00000581707 CHPF2Q9P2E5 772 aa25.33■■□□□ 1.65
SREBF1-220ENST00000581707 AIMP1Q12904 312 aaKnown RBP25.32■■□□□ 1.64
SREBF1-220ENST00000581707 CCDC27Q2M243 656 aa25.32■■□□□ 1.64
SREBF1-220ENST00000581707 C9orf131Q5VYM1 1079 aa25.32■■□□□ 1.64
SREBF1-220ENST00000581707 ZNF34Q8IZ26 560 aa25.32■■□□□ 1.64
SREBF1-220ENST00000581707 ZNF526Q8TF50 670 aaPredicted RBP25.32■■□□□ 1.64
SREBF1-220ENST00000581707 XAGE3Q8WTP9 111 aa25.32■■□□□ 1.64
SREBF1-220ENST00000581707 CNKSR1Q969H4 720 aa25.32■■□□□ 1.64
SREBF1-220ENST00000581707 GPBP1L1Q9HC44 474 aaPredicted RBP25.32■■□□□ 1.64
SREBF1-220ENST00000581707 KLRG2A4D1S0 409 aaPredicted RBP25.3■■□□□ 1.64
SREBF1-220ENST00000581707 DBF4Q9UBU7 674 aaPredicted RBP25.3■■□□□ 1.64
SREBF1-220ENST00000581707 UBN2Q6ZU65 1347 aa25.3■■□□□ 1.64
SREBF1-220ENST00000581707 SBF1O95248 1867 aa25.3■■□□□ 1.64
SREBF1-220ENST00000581707 SUSD4Q5VX71 490 aa25.29■■□□□ 1.64
SREBF1-220ENST00000581707 NUTM1Q86Y26 1132 aa25.29■■□□□ 1.64
SREBF1-220ENST00000581707 WWC1Q8IX03 1113 aa25.29■■□□□ 1.64
SREBF1-220ENST00000581707 RNF181Q9P0P0 153 aa25.29■■□□□ 1.64
SREBF1-220ENST00000581707 ZNF219Q9P2Y4 722 aaPredicted RBP25.29■■□□□ 1.64
SREBF1-220ENST00000581707 C21orf2O43822 256 aa25.28■■□□□ 1.64
SREBF1-220ENST00000581707 NPR1P16066 1061 aa25.28■■□□□ 1.64
SREBF1-220ENST00000581707 ERFEQ4G0M1 354 aa25.28■■□□□ 1.64
SREBF1-220ENST00000581707 PARP10Q53GL7 1025 aa25.28■■□□□ 1.64
SREBF1-220ENST00000581707 ELL2O00472 640 aaPredicted RBP25.27■■□□□ 1.64
SREBF1-220ENST00000581707 RASSF7Q02833 373 aa25.27■■□□□ 1.64
SREBF1-220ENST00000581707 NCBP3Q53F19 620 aaKnown RBP25.27■■□□□ 1.64
SREBF1-220ENST00000581707 PRPF40BQ6NWY9 871 aaKnown RBP25.27■■□□□ 1.64
SREBF1-220ENST00000581707 PPP1R42Q7Z4L9 355 aa25.27■■□□□ 1.64
SREBF1-220ENST00000581707 SLX4Q8IY92 1834 aa25.27■■□□□ 1.64
SREBF1-220ENST00000581707 CACNA1SQ13698 1873 aa25.27■■□□□ 1.64
SREBF1-220ENST00000581707 IBTKQ9P2D0 1353 aaPredicted RBP25.27■■□□□ 1.64
SREBF1-220ENST00000581707 HSP90AB3PQ58FF7 597 aa25.26■■□□□ 1.63
SREBF1-220ENST00000581707 HYPKQ9NX55 129 aa25.26■■□□□ 1.63
SREBF1-220ENST00000581707 NTSR2O95665 410 aa25.25■■□□□ 1.63
SREBF1-220ENST00000581707 C8orf58Q8NAV2 365 aa25.25■■□□□ 1.63
SREBF1-220ENST00000581707 ABCC12Q96J65 1359 aa25.25■■□□□ 1.63
SREBF1-220ENST00000581707 ARFGEF2Q9Y6D5 1785 aa25.24■■□□□ 1.63
SREBF1-220ENST00000581707 NFKBIEO00221 500 aa25.24■■□□□ 1.63
SREBF1-220ENST00000581707 LMNB1P20700 586 aa25.24■■□□□ 1.63
SREBF1-220ENST00000581707 C1QTNF8P60827 252 aa25.24■■□□□ 1.63
SREBF1-220ENST00000581707 FAM9BQ8IZU0 186 aa25.24■■□□□ 1.63
SREBF1-220ENST00000581707 TCIRG1Q13488 830 aa25.23■■□□□ 1.63
SREBF1-220ENST00000581707 ANKRD13DQ6ZTN6 518 aa25.23■■□□□ 1.63
SREBF1-220ENST00000581707 PLBD2Q8NHP8 589 aa25.23■■□□□ 1.63
SREBF1-220ENST00000581707 UTP14AQ9BVJ6 771 aaKnown RBP25.23■■□□□ 1.63
SREBF1-220ENST00000581707 ANKRD36CQ5JPF3 1778 aa25.23■■□□□ 1.63
SREBF1-220ENST00000581707 CCDC88AQ3V6T2 1871 aa25.22■■□□□ 1.63
SREBF1-220ENST00000581707 IL16Q14005 1332 aa25.22■■□□□ 1.63
SREBF1-220ENST00000581707 SOGA3Q5TF21 947 aa25.22■■□□□ 1.63
SREBF1-220ENST00000581707 TSR2Q969E8 191 aaKnown RBP25.22■■□□□ 1.63
SREBF1-220ENST00000581707 CHMP4AQ9BY43 222 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms