RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
TOP3A-211ENST00000581536 CANXP27824 592 aaKnown RBP12.89□□□□□ -0.35
TOP3A-211ENST00000581536 ZEB1P37275 1124 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-211ENST00000581536 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-211ENST00000581536 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
TOP3A-211ENST00000581536 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
TOP3A-211ENST00000581536 RTF1Q92541 710 aaKnown RBP12.89□□□□□ -0.35
TOP3A-211ENST00000581536 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
TOP3A-211ENST00000581536 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
TOP3A-211ENST00000581536 N4BP2Q86UW6 1770 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-211ENST00000581536 YBX3P16989 372 aaKnown RBP eCLIP12.88□□□□□ -0.35
TOP3A-211ENST00000581536 YY1P25490 414 aa12.88□□□□□ -0.35
TOP3A-211ENST00000581536 NLGN1Q8N2Q7 840 aa12.88□□□□□ -0.35
TOP3A-211ENST00000581536 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-211ENST00000581536 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
TOP3A-211ENST00000581536 CD2APQ9Y5K6 639 aa12.88□□□□□ -0.35
TOP3A-211ENST00000581536 USP16Q9Y5T5 823 aa12.88□□□□□ -0.35
TOP3A-211ENST00000581536 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-211ENST00000581536 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
TOP3A-211ENST00000581536 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
TOP3A-211ENST00000581536 A1BGP04217 495 aa12.87□□□□□ -0.35
TOP3A-211ENST00000581536 USPL1Q5W0Q7 1092 aa12.87□□□□□ -0.35
TOP3A-211ENST00000581536 PRKRIP1Q9H875 184 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-211ENST00000581536 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
TOP3A-211ENST00000581536 PLCG2P16885 1265 aa12.86□□□□□ -0.35
TOP3A-211ENST00000581536 PIP4K2AP48426 406 aaPredicted RBP12.86□□□□□ -0.35
TOP3A-211ENST00000581536 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
TOP3A-211ENST00000581536 NFE2L2Q16236 605 aa12.86□□□□□ -0.35
TOP3A-211ENST00000581536 CCDC146Q8IYE0 955 aa12.86□□□□□ -0.35
TOP3A-211ENST00000581536 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
TOP3A-211ENST00000581536 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
TOP3A-211ENST00000581536 AFDNP55196 1824 aaKnown RBP12.85□□□□□ -0.35
TOP3A-211ENST00000581536 STARD3NLO95772 234 aa12.85□□□□□ -0.35
TOP3A-211ENST00000581536 TM4SF1P30408 202 aa12.85□□□□□ -0.35
TOP3A-211ENST00000581536 DDR1Q08345 913 aa12.85□□□□□ -0.35
TOP3A-211ENST00000581536 BCL2L12Q9HB09 334 aa12.85□□□□□ -0.35
TOP3A-211ENST00000581536 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
TOP3A-211ENST00000581536 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
TOP3A-211ENST00000581536 A0A0G2JLW4 131 aa12.84□□□□□ -0.35
TOP3A-211ENST00000581536 ZPR1O75312 459 aa12.84□□□□□ -0.35
TOP3A-211ENST00000581536 NEFMP07197 916 aa12.84□□□□□ -0.35
TOP3A-211ENST00000581536 EIF5P55010 431 aaKnown RBP12.84□□□□□ -0.35
TOP3A-211ENST00000581536 RIPK4P57078 832 aa12.84□□□□□ -0.35
TOP3A-211ENST00000581536 TEX13AQ9BXU3 409 aaPredicted RBP12.84□□□□□ -0.35
TOP3A-211ENST00000581536 NARFQ9UHQ1 456 aa12.84□□□□□ -0.35
TOP3A-211ENST00000581536 COLQQ9Y215 455 aaPredicted RBP12.84□□□□□ -0.35
TOP3A-211ENST00000581536 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
TOP3A-211ENST00000581536 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
TOP3A-211ENST00000581536 KIAA1551Q9HCM1 1747 aa12.83□□□□□ -0.36
TOP3A-211ENST00000581536 TMPOP42166 694 aaKnown RBP12.83□□□□□ -0.36
TOP3A-211ENST00000581536 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
TOP3A-211ENST00000581536 CCDC184Q52MB2 194 aa12.83□□□□□ -0.36
TOP3A-211ENST00000581536 MFRPQ9BY79 579 aa12.83□□□□□ -0.36
TOP3A-211ENST00000581536 PNNQ9H307 717 aaKnown RBP12.83□□□□□ -0.36
TOP3A-211ENST00000581536 RYDENQ9NUL5 291 aaKnown RBP12.83□□□□□ -0.36
TOP3A-211ENST00000581536 TBC1D2BQ9UPU7 963 aa12.83□□□□□ -0.36
TOP3A-211ENST00000581536 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
TOP3A-211ENST00000581536 COL15A1P39059 1388 aa12.82□□□□□ -0.36
TOP3A-211ENST00000581536 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
TOP3A-211ENST00000581536 ZNF316A6NFI3 1004 aaPredicted RBP12.82□□□□□ -0.36
TOP3A-211ENST00000581536 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
TOP3A-211ENST00000581536 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
TOP3A-211ENST00000581536 SNRPA1P09661 255 aaKnown RBP12.81□□□□□ -0.36
TOP3A-211ENST00000581536 DPEP1P16444 411 aa12.81□□□□□ -0.36
TOP3A-211ENST00000581536 KCNA3P22001 575 aa12.81□□□□□ -0.36
TOP3A-211ENST00000581536 NFIXQ14938 502 aa12.81□□□□□ -0.36
TOP3A-211ENST00000581536 BICDL1Q6ZP65 573 aa12.81□□□□□ -0.36
TOP3A-211ENST00000581536 PDCD7Q8N8D1 485 aaKnown RBP12.81□□□□□ -0.36
TOP3A-211ENST00000581536 FBXO22Q8NEZ5 403 aa12.81□□□□□ -0.36
TOP3A-211ENST00000581536 KDM3BQ7LBC6 1761 aa12.81□□□□□ -0.36
TOP3A-211ENST00000581536 NBPF26B4DH59 902 aa12.8□□□□□ -0.36
TOP3A-211ENST00000581536 IL6STP40189 918 aaPredicted RBP12.8□□□□□ -0.36
TOP3A-211ENST00000581536 NBPF10Q6P3W6 841 aaKnown RBP12.8□□□□□ -0.36
TOP3A-211ENST00000581536 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
TOP3A-211ENST00000581536 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.8□□□□□ -0.36
TOP3A-211ENST00000581536 BRCA1P38398 1863 aaKnown RBP12.79□□□□□ -0.36
TOP3A-211ENST00000581536 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
TOP3A-211ENST00000581536 TGFB2P61812 414 aa12.79□□□□□ -0.36
TOP3A-211ENST00000581536 WDR43Q15061 677 aaKnown RBP eCLIP12.79□□□□□ -0.36
TOP3A-211ENST00000581536 TBC1D9BQ66K14 1250 aa12.79□□□□□ -0.36
TOP3A-211ENST00000581536 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
TOP3A-211ENST00000581536 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
TOP3A-211ENST00000581536 GRIN3BO60391 1043 aa12.78□□□□□ -0.36
TOP3A-211ENST00000581536 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-211ENST00000581536 SERPINB2P05120 415 aa12.78□□□□□ -0.36
TOP3A-211ENST00000581536 CHRNA5P30532 468 aa12.78□□□□□ -0.36
TOP3A-211ENST00000581536 CCDC24Q8N4L8 307 aa12.78□□□□□ -0.36
TOP3A-211ENST00000581536 NGEFQ8N5V2 710 aa12.78□□□□□ -0.36
TOP3A-211ENST00000581536 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
TOP3A-211ENST00000581536 A0A087WZG4 1122 aa12.77□□□□□ -0.37
TOP3A-211ENST00000581536 CAMTA2O94983 1202 aa12.77□□□□□ -0.37
TOP3A-211ENST00000581536 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-211ENST00000581536 C10orf71Q711Q0 1435 aa12.77□□□□□ -0.37
TOP3A-211ENST00000581536 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
TOP3A-211ENST00000581536 PNISRQ8TF01 805 aaKnown RBP12.76□□□□□ -0.37
TOP3A-211ENST00000581536 MS4A4AQ96JQ5 239 aa12.76□□□□□ -0.37
TOP3A-211ENST00000581536 BCS1LQ9Y276 419 aa12.76□□□□□ -0.37
TOP3A-211ENST00000581536 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
TOP3A-211ENST00000581536 NUP98P52948 1817 aa12.75□□□□□ -0.37
TOP3A-211ENST00000581536 ANKRD31Q8N7Z5 1873 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms