RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 HLTFQ14527 1009 aaKnown RBP eCLIP16.76■□□□□ 0.27
CSNK1D-217ENST00000581241 BIN1O00499 593 aa16.76■□□□□ 0.27
CSNK1D-217ENST00000581241 IVLP07476 585 aa16.76■□□□□ 0.27
CSNK1D-217ENST00000581241 CCT2P78371 535 aaKnown RBP16.76■□□□□ 0.27
CSNK1D-217ENST00000581241 NOLC1Q14978 699 aaKnown RBP eCLIP16.76■□□□□ 0.27
CSNK1D-217ENST00000581241 CTCFLQ8NI51 663 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-217ENST00000581241 ZSCAN22P10073 491 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-217ENST00000581241 ANAPC15P60006 121 aa16.76■□□□□ 0.27
CSNK1D-217ENST00000581241 UBE4AQ14139 1066 aa16.76■□□□□ 0.27
CSNK1D-217ENST00000581241 DNAI2Q9GZS0 605 aa16.76■□□□□ 0.27
CSNK1D-217ENST00000581241 NCAPD3P42695 1498 aa16.76■□□□□ 0.27
CSNK1D-217ENST00000581241 MINDY4BA8MYZ0 360 aa16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 IGHDP01880 384 aa16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 CTNNBL1Q8WYA6 563 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 CEP112Q8N8E3 955 aa16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 CEP63Q96MT8 703 aa16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 CCDC8Q9H0W5 538 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 ZSCAN16Q9H4T2 348 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 TFIP11Q9UBB9 837 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 NLRP5P59047 1200 aa16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 GNG11P61952 73 aa16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 PROSER2Q86WR7 435 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 LARP6Q9BRS8 491 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 ZMYND15Q9H091 742 aa16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 TAF7Q15545 349 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 RNF41Q9H4P4 317 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 HMG20BQ9P0W2 317 aa16.75■□□□□ 0.27
CSNK1D-217ENST00000581241 AMPD3Q01432 767 aa16.74■□□□□ 0.27
CSNK1D-217ENST00000581241 ZSCAN29Q8IWY8 852 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-217ENST00000581241 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
CSNK1D-217ENST00000581241 SPECC1Q5M775 1068 aa16.74■□□□□ 0.27
CSNK1D-217ENST00000581241 NUCB1Q02818 461 aa16.74■□□□□ 0.27
CSNK1D-217ENST00000581241 POLR3DP05423 398 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-217ENST00000581241 MAP3K12Q12852 859 aa16.74■□□□□ 0.27
CSNK1D-217ENST00000581241 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.74■□□□□ 0.276e-7■■□□□ 12.4
CSNK1D-217ENST00000581241 GIMAP6Q6P9H5 292 aa16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 CCDC85AQ96PX6 553 aaPredicted RBP16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 DNAAF4Q8WXU2 420 aa16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 JADE2Q9NQC1 790 aa16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 GTF2A1P52655 376 aaPredicted RBP16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 CAVIN4Q5BKX8 364 aa16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 MKNK2Q9HBH9 465 aa16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 TMCO5BA8MYB1 307 aa16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 IFIT3O14879 490 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 LIG1P18858 919 aa16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 HOOK3Q86VS8 718 aa16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 ABCF2Q9UG63 623 aa16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 HCLS1P14317 486 aaPredicted RBP16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 ANO6Q4KMQ2 910 aa16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 NUDT16Q96DE0 195 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-217ENST00000581241 CCDC194A0A1B0GVG4 234 aa16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 CATIPQ7Z7H3 387 aa16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 ZNF830Q96NB3 372 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 CAMSAP2Q08AD1 1489 aa16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 C11orf95C9JLR9 678 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 CALML4Q96GE6 196 aa16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 GTPBP4Q9BZE4 634 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 F6X3S4 739 aa16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 IFI16Q16666 785 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 IQCA1Q86XH1 822 aa16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 STARD3NLO95772 234 aa16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 SLC5A1P13866 664 aa16.72■□□□□ 0.27
CSNK1D-217ENST00000581241 IPO4Q8TEX9 1081 aaKnown RBP16.71■□□□□ 0.27
CSNK1D-217ENST00000581241 TMX3Q96JJ7 454 aa16.71■□□□□ 0.27
CSNK1D-217ENST00000581241 NEK1Q96PY6 1258 aa16.71■□□□□ 0.27
CSNK1D-217ENST00000581241 NSD2O96028 1365 aa16.71■□□□□ 0.27
CSNK1D-217ENST00000581241 XRCC6P12956 609 aaKnown RBP eCLIP16.71■□□□□ 0.273e-10■□□□□ 9.9
CSNK1D-217ENST00000581241 CCDC102BQ68D86 513 aa16.71■□□□□ 0.27
CSNK1D-217ENST00000581241 TUBB4AP04350 444 aa16.71■□□□□ 0.27
CSNK1D-217ENST00000581241 CCDC40Q4G0X9 1142 aa16.71■□□□□ 0.27
CSNK1D-217ENST00000581241 MAP3K1Q13233 1512 aa16.71■□□□□ 0.27
CSNK1D-217ENST00000581241 HDAC1Q13547 482 aaPredicted RBP16.71■□□□□ 0.27
CSNK1D-217ENST00000581241 CTAGE1Q96RT6 745 aa16.71■□□□□ 0.27
CSNK1D-217ENST00000581241 UBASH3AP57075 661 aa16.71■□□□□ 0.26
CSNK1D-217ENST00000581241 RMND1Q9NWS8 449 aa16.71■□□□□ 0.26
CSNK1D-217ENST00000581241 CNPY2Q9Y2B0 182 aa16.71■□□□□ 0.26
CSNK1D-217ENST00000581241 USP48Q86UV5 1035 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 ECHDC1Q9NTX5 307 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 USP16Q9Y5T5 823 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 CDK13Q14004 1512 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 RANBP6O60518 1105 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 HYPKQ9NX55 129 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 GOLIM4O00461 696 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 C6orf163Q5TEZ5 329 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 PPP4R3AQ6IN85 833 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 KCNH5Q8NCM2 988 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 CTAGE15A4D2H0 777 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 CTAGE8P0CG41 777 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 MNAT1P51948 309 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 CTAGE6Q86UF2 777 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 CTAGE4Q8IX94 777 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 SNX21Q969T3 373 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 CCDC94Q9BW85 323 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 HSPA4P34932 840 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 BBXQ8WY36 941 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 NSRP1Q9H0G5 558 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 ARFGAP3Q9NP61 516 aa16.7■□□□□ 0.26
CSNK1D-217ENST00000581241 ISM2Q6H9L7 571 aa16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 THEMISQ8N1K5 641 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-217ENST00000581241 CUL5Q93034 780 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms