RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 NBPF26B4DH59 902 aa26.28■■□□□ 1.8
SMG8-204ENST00000580498 NBPF10Q6P3W6 841 aaKnown RBP26.28■■□□□ 1.8
SMG8-204ENST00000580498 NGEFQ8N5V2 710 aa26.28■■□□□ 1.8
SMG8-204ENST00000580498 NBPF15Q8N660 670 aa26.28■■□□□ 1.8
SMG8-204ENST00000580498 PRR5LQ6MZQ0 368 aa26.27■■□□□ 1.8
SMG8-204ENST00000580498 TPTE2Q6XPS3 522 aa26.27■■□□□ 1.8
SMG8-204ENST00000580498 NIP7Q9Y221 180 aaKnown RBP eCLIP26.27■■□□□ 1.8
SMG8-204ENST00000580498 GTF2E1P29083 439 aaPredicted RBP26.26■■□□□ 1.79
SMG8-204ENST00000580498 ERVV-1B6SEH8 477 aa26.25■■□□□ 1.79
SMG8-204ENST00000580498 MYL6BP14649 208 aa26.25■■□□□ 1.79
SMG8-204ENST00000580498 EIF2S2P20042 333 aaKnown RBP26.25■■□□□ 1.79
SMG8-204ENST00000580498 ZNF622Q969S3 477 aaKnown RBP eCLIP26.25■■□□□ 1.79
SMG8-204ENST00000580498 DLEC1Q9Y238 1755 aa26.23■■□□□ 1.79
SMG8-204ENST00000580498 NYXQ9GZU5 481 aa26.23■■□□□ 1.79
SMG8-204ENST00000580498 ADCY9O60503 1353 aa26.22■■□□□ 1.79
SMG8-204ENST00000580498 MAP3K15Q6ZN16 1313 aa26.22■■□□□ 1.79
SMG8-204ENST00000580498 CNKSR1Q969H4 720 aa26.22■■□□□ 1.79
SMG8-204ENST00000580498 ZNF526Q8TF50 670 aaPredicted RBP26.21■■□□□ 1.79
SMG8-204ENST00000580498 TRIM35Q9UPQ4 493 aa26.21■■□□□ 1.79
SMG8-204ENST00000580498 CHL1O00533 1208 aa26.2■■□□□ 1.78
SMG8-204ENST00000580498 APAF1O14727 1248 aa26.2■■□□□ 1.78
SMG8-204ENST00000580498 CFAP44Q96MT7 982 aa26.19■■□□□ 1.78
SMG8-204ENST00000580498 HOXB7P09629 217 aa26.18■■□□□ 1.78
SMG8-204ENST00000580498 SOGA3Q5TF21 947 aa26.18■■□□□ 1.78
SMG8-204ENST00000580498 C9orf131Q5VYM1 1079 aa26.18■■□□□ 1.78
SMG8-204ENST00000580498 STYK1Q6J9G0 422 aa26.18■■□□□ 1.78
SMG8-204ENST00000580498 CCDC24Q8N4L8 307 aa26.18■■□□□ 1.78
SMG8-204ENST00000580498 MASTLQ96GX5 879 aa26.18■■□□□ 1.78
SMG8-204ENST00000580498 CHMP4AQ9BY43 222 aa26.18■■□□□ 1.78
SMG8-204ENST00000580498 FAM177BA6PVY3 158 aa26.17■■□□□ 1.78
SMG8-204ENST00000580498 C1QTNF8P60827 252 aa26.17■■□□□ 1.78
SMG8-204ENST00000580498 RNF181Q9P0P0 153 aa26.17■■□□□ 1.78
SMG8-204ENST00000580498 ANKRD31Q8N7Z5 1873 aa26.17■■□□□ 1.78
SMG8-204ENST00000580498 GNAI1P63096 354 aa26.16■■□□□ 1.78
SMG8-204ENST00000580498 HLFQ16534 295 aa26.16■■□□□ 1.78
SMG8-204ENST00000580498 ZBTB3Q9H5J0 574 aa26.16■■□□□ 1.78
SMG8-204ENST00000580498 MRS2Q9HD23 443 aa26.16■■□□□ 1.78
SMG8-204ENST00000580498 HSP90AB3PQ58FF7 597 aa26.15■■□□□ 1.78
SMG8-204ENST00000580498 TTLL7Q6ZT98 887 aa26.15■■□□□ 1.78
SMG8-204ENST00000580498 NUP98P52948 1817 aa26.15■■□□□ 1.78
SMG8-204ENST00000580498 HDGFL1Q5TGJ6 251 aa26.14■■□□□ 1.78
SMG8-204ENST00000580498 PPP1R42Q7Z4L9 355 aa26.14■■□□□ 1.78
SMG8-204ENST00000580498 IFT57Q9NWB7 429 aa26.14■■□□□ 1.78
SMG8-204ENST00000580498 SRGNP10124 158 aa26.13■■□□□ 1.77
SMG8-204ENST00000580498 NPR1P16066 1061 aa26.13■■□□□ 1.77
SMG8-204ENST00000580498 LMNB1P20700 586 aa26.13■■□□□ 1.77
SMG8-204ENST00000580498 GIGYF2Q6Y7W6 1299 aaKnown RBP26.13■■□□□ 1.77
SMG8-204ENST00000580498 NECTIN2Q92692 538 aa26.13■■□□□ 1.77
SMG8-204ENST00000580498 KDM2BQ8NHM5 1336 aa26.13■■□□□ 1.77
SMG8-204ENST00000580498 ZC3H4Q9UPT8 1303 aaKnown RBP26.13■■□□□ 1.77
SMG8-204ENST00000580498 PARP10Q53GL7 1025 aa26.12■■□□□ 1.77
SMG8-204ENST00000580498 DDX21Q9NR30 783 aaKnown RBP eCLIP26.12■■□□□ 1.77
SMG8-204ENST00000580498 IBTKQ9P2D0 1353 aaPredicted RBP26.11■■□□□ 1.77
SMG8-204ENST00000580498 GPTP24298 496 aa26.1■■□□□ 1.77
SMG8-204ENST00000580498 ALDH1B1P30837 517 aa26.1■■□□□ 1.77
SMG8-204ENST00000580498 DBF4Q9UBU7 674 aaPredicted RBP26.1■■□□□ 1.77
SMG8-204ENST00000580498 COL11A2P13942 1736 aaPredicted RBP26.09■■□□□ 1.77
SMG8-204ENST00000580498 C21orf2O43822 256 aa26.09■■□□□ 1.77
SMG8-204ENST00000580498 AIMP1Q12904 312 aaKnown RBP26.09■■□□□ 1.77
SMG8-204ENST00000580498 PRPF40BQ6NWY9 871 aaKnown RBP26.09■■□□□ 1.77
SMG8-204ENST00000580498 MBIPQ9NS73 344 aa26.09■■□□□ 1.77
SMG8-204ENST00000580498 ZNF219Q9P2Y4 722 aaPredicted RBP26.09■■□□□ 1.77
SMG8-204ENST00000580498 DUSP27Q5VZP5 1158 aa26.08■■□□□ 1.77
SMG8-204ENST00000580498 COPS6Q7L5N1 327 aa26.08■■□□□ 1.77
SMG8-204ENST00000580498 RASSF7Q02833 373 aa26.07■■□□□ 1.76
SMG8-204ENST00000580498 PDIA6Q15084 440 aa26.07■■□□□ 1.76
SMG8-204ENST00000580498 C16orf71Q8IYS4 520 aaPredicted RBP26.07■■□□□ 1.76
SMG8-204ENST00000580498 XAGE3Q8WTP9 111 aa26.07■■□□□ 1.76
SMG8-204ENST00000580498 RPGRQ92834 1020 aaKnown RBP26.07■■□□□ 1.76
SMG8-204ENST00000580498 HYPKQ9NX55 129 aa26.07■■□□□ 1.76
SMG8-204ENST00000580498 SBF1O95248 1867 aa26.06■■□□□ 1.76
SMG8-204ENST00000580498 CACNA1SQ13698 1873 aa26.06■■□□□ 1.76
SMG8-204ENST00000580498 ARFGEF2Q9Y6D5 1785 aa26.06■■□□□ 1.76
SMG8-204ENST00000580498 ANXA1P04083 346 aa26.06■■□□□ 1.76
SMG8-204ENST00000580498 ZNF34Q8IZ26 560 aa26.06■■□□□ 1.76
SMG8-204ENST00000580498 TAOK3Q9H2K8 898 aa26.06■■□□□ 1.76
SMG8-204ENST00000580498 CHPF2Q9P2E5 772 aa26.06■■□□□ 1.76
SMG8-204ENST00000580498 RNF123Q5XPI4 1314 aa26.06■■□□□ 1.76
SMG8-204ENST00000580498 SENP3-EIF4A1A0A087X0R7 540 aa26.05■■□□□ 1.76
SMG8-204ENST00000580498 KLRG2A4D1S0 409 aaPredicted RBP26.05■■□□□ 1.76
SMG8-204ENST00000580498 KRT24Q2M2I5 525 aa26.05■■□□□ 1.76
SMG8-204ENST00000580498 PROSER3Q2NL68 480 aa26.05■■□□□ 1.76
SMG8-204ENST00000580498 CCDC93Q567U6 631 aa26.05■■□□□ 1.76
SMG8-204ENST00000580498 UTP14AQ9BVJ6 771 aaKnown RBP26.05■■□□□ 1.76
SMG8-204ENST00000580498 ZNF853P0CG23 659 aa26.04■■□□□ 1.76
SMG8-204ENST00000580498 NUTM1Q86Y26 1132 aa26.04■■□□□ 1.76
SMG8-204ENST00000580498 TMX4Q9H1E5 349 aaPredicted RBP26.04■■□□□ 1.76
SMG8-204ENST00000580498 CCDC27Q2M243 656 aa26.03■■□□□ 1.76
SMG8-204ENST00000580498 ERFEQ4G0M1 354 aa26.03■■□□□ 1.76
SMG8-204ENST00000580498 SUSD4Q5VX71 490 aa26.03■■□□□ 1.76
SMG8-204ENST00000580498 RIC1Q4ADV7 1423 aa26.03■■□□□ 1.76
SMG8-204ENST00000580498 CCDC184Q52MB2 194 aa26.02■■□□□ 1.76
SMG8-204ENST00000580498 LRP10Q7Z4F1 713 aa26.02■■□□□ 1.76
SMG8-204ENST00000580498 NLRP3Q96P20 1036 aa26.02■■□□□ 1.76
SMG8-204ENST00000580498 UBN2Q6ZU65 1347 aa26.02■■□□□ 1.76
SMG8-204ENST00000580498 LTBP3Q9NS15 1303 aa26.02■■□□□ 1.76
SMG8-204ENST00000580498 NCBP3Q53F19 620 aaKnown RBP26.01■■□□□ 1.75
SMG8-204ENST00000580498 DPY19L2Q6NUT2 758 aa26.01■■□□□ 1.75
SMG8-204ENST00000580498 SLX4Q8IY92 1834 aa26.01■■□□□ 1.75
SMG8-204ENST00000580498 RTKN2Q8IZC4 609 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms