RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 ARHGAP27Q6ZUM4 889 aa34.15■■■■□ 3.06
LIMD2-208ENST00000579814 NBPF5PQ86XG9 351 aaPredicted RBP34.15■■■■□ 3.06
LIMD2-208ENST00000579814 ST5P78524 1137 aa34.14■■■■□ 3.06
LIMD2-208ENST00000579814 TTLL7Q6ZT98 887 aa34.14■■■■□ 3.06
LIMD2-208ENST00000579814 MAP3K15Q6ZN16 1313 aa34.13■■■■□ 3.05
LIMD2-208ENST00000579814 CCDC24Q8N4L8 307 aa34.13■■■■□ 3.05
LIMD2-208ENST00000579814 SCN7AQ01118 1682 aa34.12■■■■□ 3.05
LIMD2-208ENST00000579814 GNAI1P63096 354 aa34.12■■■■□ 3.05
LIMD2-208ENST00000579814 KRT24Q2M2I5 525 aa34.12■■■■□ 3.05
LIMD2-208ENST00000579814 IFT57Q9NWB7 429 aa34.12■■■■□ 3.05
LIMD2-208ENST00000579814 CHD4Q14839 1912 aa34.12■■■■□ 3.05
LIMD2-208ENST00000579814 PDIA6Q15084 440 aa34.11■■■■□ 3.05
LIMD2-208ENST00000579814 TPTE2Q6XPS3 522 aa34.11■■■■□ 3.05
LIMD2-208ENST00000579814 NECTIN2Q92692 538 aa34.11■■■■□ 3.05
LIMD2-208ENST00000579814 N4BP2Q86UW6 1770 aaPredicted RBP34.11■■■■□ 3.05
LIMD2-208ENST00000579814 KIAA1551Q9HCM1 1747 aa34.1■■■■□ 3.05
LIMD2-208ENST00000579814 ZNF853P0CG23 659 aa34.1■■■■□ 3.05
LIMD2-208ENST00000579814 MBIPQ9NS73 344 aa34.1■■■■□ 3.05
LIMD2-208ENST00000579814 HOXB7P09629 217 aa34.09■■■■□ 3.05
LIMD2-208ENST00000579814 TTLL6Q8N841 843 aa34.09■■■■□ 3.05
LIMD2-208ENST00000579814 NRXN2Q9P2S2 1712 aa34.08■■■■□ 3.05
LIMD2-208ENST00000579814 ZBTB3Q9H5J0 574 aa34.08■■■■□ 3.05
LIMD2-208ENST00000579814 LAMB4A4D0S4 1761 aa34.08■■■■□ 3.05
LIMD2-208ENST00000579814 PROSER3Q2NL68 480 aa34.06■■■■□ 3.04
LIMD2-208ENST00000579814 LRP10Q7Z4F1 713 aa34.06■■■■□ 3.04
LIMD2-208ENST00000579814 ZNF622Q969S3 477 aaKnown RBP eCLIP34.06■■■■□ 3.04
LIMD2-208ENST00000579814 FAM177BA6PVY3 158 aa34.05■■■■□ 3.04
LIMD2-208ENST00000579814 ANXA1P04083 346 aa34.05■■■■□ 3.04
LIMD2-208ENST00000579814 GTF2E1P29083 439 aaPredicted RBP34.05■■■■□ 3.04
LIMD2-208ENST00000579814 CCDC27Q2M243 656 aa34.05■■■■□ 3.04
LIMD2-208ENST00000579814 HDGFL1Q5TGJ6 251 aa34.05■■■■□ 3.04
LIMD2-208ENST00000579814 DUSP27Q5VZP5 1158 aa34.05■■■■□ 3.04
LIMD2-208ENST00000579814 DDX21Q9NR30 783 aaKnown RBP eCLIP34.05■■■■□ 3.04
LIMD2-208ENST00000579814 AFDNP55196 1824 aaKnown RBP34.04■■■■□ 3.04
LIMD2-208ENST00000579814 GIGYF2Q6Y7W6 1299 aaKnown RBP34.03■■■■□ 3.04
LIMD2-208ENST00000579814 NCBP3Q53F19 620 aaKnown RBP34.02■■■■□ 3.04
LIMD2-208ENST00000579814 COPS6Q7L5N1 327 aa34.02■■■■□ 3.04
LIMD2-208ENST00000579814 NYXQ9GZU5 481 aa34.02■■■■□ 3.04
LIMD2-208ENST00000579814 BCORQ6W2J9 1755 aa34.01■■■■□ 3.04
LIMD2-208ENST00000579814 SENP3-EIF4A1A0A087X0R7 540 aa34.01■■■■□ 3.03
LIMD2-208ENST00000579814 AIMP1Q12904 312 aaKnown RBP34.01■■■■□ 3.03
LIMD2-208ENST00000579814 GPTP24298 496 aa34■■■■□ 3.03
LIMD2-208ENST00000579814 WWC1Q8IX03 1113 aa34■■■■□ 3.03
LIMD2-208ENST00000579814 XAGE3Q8WTP9 111 aa34■■■■□ 3.03
LIMD2-208ENST00000579814 CHPF2Q9P2E5 772 aa34■■■■□ 3.03
LIMD2-208ENST00000579814 DBF4Q9UBU7 674 aaPredicted RBP34■■■■□ 3.03
LIMD2-208ENST00000579814 ATP10DQ9P241 1426 aa33.99■■■■□ 3.03
LIMD2-208ENST00000579814 SRGNP10124 158 aa33.98■■■■□ 3.03
LIMD2-208ENST00000579814 STYK1Q6J9G0 422 aa33.98■■■■□ 3.03
LIMD2-208ENST00000579814 ZNF34Q8IZ26 560 aa33.98■■■■□ 3.03
LIMD2-208ENST00000579814 CNKSR1Q969H4 720 aa33.98■■■■□ 3.03
LIMD2-208ENST00000579814 MASTLQ96GX5 879 aa33.98■■■■□ 3.03
LIMD2-208ENST00000579814 FAM9BQ8IZU0 186 aa33.97■■■■□ 3.03
LIMD2-208ENST00000579814 KLRG2A4D1S0 409 aaPredicted RBP33.95■■■■□ 3.03
LIMD2-208ENST00000579814 ELL2O00472 640 aaPredicted RBP33.95■■■■□ 3.03
LIMD2-208ENST00000579814 PARP10Q53GL7 1025 aa33.95■■■■□ 3.03
LIMD2-208ENST00000579814 HSP90AB3PQ58FF7 597 aa33.95■■■■□ 3.03
LIMD2-208ENST00000579814 CHMP4AQ9BY43 222 aa33.95■■■■□ 3.03
LIMD2-208ENST00000579814 ADCY9O60503 1353 aa33.95■■■■□ 3.02
LIMD2-208ENST00000579814 SUSD4Q5VX71 490 aa33.94■■■■□ 3.02
LIMD2-208ENST00000579814 C9orf131Q5VYM1 1079 aa33.94■■■■□ 3.02
LIMD2-208ENST00000579814 HYPKQ9NX55 129 aa33.94■■■■□ 3.02
LIMD2-208ENST00000579814 NPR1P16066 1061 aa33.93■■■■□ 3.02
LIMD2-208ENST00000579814 PPP1R42Q7Z4L9 355 aa33.93■■■■□ 3.02
LIMD2-208ENST00000579814 UBN2Q6ZU65 1347 aa33.93■■■■□ 3.02
LIMD2-208ENST00000579814 BRCA1P38398 1863 aaKnown RBP33.93■■■■□ 3.02
LIMD2-208ENST00000579814 NUTM1Q86Y26 1132 aa33.92■■■■□ 3.02
LIMD2-208ENST00000579814 C8orf58Q8NAV2 365 aa33.92■■■■□ 3.02
LIMD2-208ENST00000579814 GPBP1L1Q9HC44 474 aaPredicted RBP33.92■■■■□ 3.02
LIMD2-208ENST00000579814 ERFEQ4G0M1 354 aa33.91■■■■□ 3.02
LIMD2-208ENST00000579814 SALL2Q9Y467 1007 aaPredicted RBP33.91■■■■□ 3.02
LIMD2-208ENST00000579814 IBTKQ9P2D0 1353 aaPredicted RBP33.9■■■■□ 3.02
LIMD2-208ENST00000579814 IL16Q14005 1332 aa33.9■■■■□ 3.02
LIMD2-208ENST00000579814 C21orf2O43822 256 aa33.9■■■■□ 3.02
LIMD2-208ENST00000579814 ZNF526Q8TF50 670 aaPredicted RBP33.9■■■■□ 3.02
LIMD2-208ENST00000579814 ZNF219Q9P2Y4 722 aaPredicted RBP33.9■■■■□ 3.02
LIMD2-208ENST00000579814 TCIRG1Q13488 830 aa33.89■■■■□ 3.02
LIMD2-208ENST00000579814 ANKRD13DQ6ZTN6 518 aa33.89■■■■□ 3.02
LIMD2-208ENST00000579814 TSR2Q969E8 191 aaKnown RBP33.89■■■■□ 3.02
LIMD2-208ENST00000579814 PRPF40BQ6NWY9 871 aaKnown RBP33.88■■■■□ 3.01
LIMD2-208ENST00000579814 PLBD2Q8NHP8 589 aa33.88■■■■□ 3.01
LIMD2-208ENST00000579814 UTP14AQ9BVJ6 771 aaKnown RBP33.88■■■■□ 3.01
LIMD2-208ENST00000579814 RNF181Q9P0P0 153 aa33.88■■■■□ 3.01
LIMD2-208ENST00000579814 NTSR2O95665 410 aa33.87■■■■□ 3.01
LIMD2-208ENST00000579814 WDR63Q8IWG1 891 aa33.87■■■■□ 3.01
LIMD2-208ENST00000579814 RASSF7Q02833 373 aa33.86■■■■□ 3.01
LIMD2-208ENST00000579814 CCDC30Q5VVM6 783 aa33.86■■■■□ 3.01
LIMD2-208ENST00000579814 ARFGEF1Q9Y6D6 1849 aa33.86■■■■□ 3.01
LIMD2-208ENST00000579814 ANKRD31Q8N7Z5 1873 aa33.85■■■■□ 3.01
LIMD2-208ENST00000579814 ALDH1B1P30837 517 aa33.85■■■■□ 3.01
LIMD2-208ENST00000579814 SOGA3Q5TF21 947 aa33.85■■■■□ 3.01
LIMD2-208ENST00000579814 LMNB1P20700 586 aa33.84■■■■□ 3.01
LIMD2-208ENST00000579814 ABCC12Q96J65 1359 aa33.84■■■■□ 3.01
LIMD2-208ENST00000579814 NLRP10Q86W26 655 aa33.83■■■■□ 3.01
LIMD2-208ENST00000579814 TSPYL6Q8N831 410 aa33.83■■■■□ 3.01
LIMD2-208ENST00000579814 CRY2Q49AN0 593 aa33.82■■■■□ 3
LIMD2-208ENST00000579814 NFKBIEO00221 500 aa33.81■■■■□ 3
LIMD2-208ENST00000579814 RPGRQ92834 1020 aaKnown RBP33.81■■■■□ 3
LIMD2-208ENST00000579814 RNF123Q5XPI4 1314 aa33.8■■■■□ 3
LIMD2-208ENST00000579814 GOLGA2Q08379 1002 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms