RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 SETDB2Q96T68 719 aa31.08■■■□□ 2.57
LIMD2-207ENST00000579329 PDIA6Q15084 440 aa31.07■■■□□ 2.56
LIMD2-207ENST00000579329 KIF6Q6ZMV9 814 aa31.07■■■□□ 2.56
LIMD2-207ENST00000579329 DUSP27Q5VZP5 1158 aa31.06■■■□□ 2.56
LIMD2-207ENST00000579329 NECTIN2Q92692 538 aa31.06■■■□□ 2.56
LIMD2-207ENST00000579329 N4BP2Q86UW6 1770 aaPredicted RBP31.06■■■□□ 2.56
LIMD2-207ENST00000579329 IL16Q14005 1332 aa31.05■■■□□ 2.56
LIMD2-207ENST00000579329 MAP3K15Q6ZN16 1313 aa31.05■■■□□ 2.56
LIMD2-207ENST00000579329 A0A0G2JLW4 131 aa31.05■■■□□ 2.56
LIMD2-207ENST00000579329 ERVV-1B6SEH8 477 aa31.05■■■□□ 2.56
LIMD2-207ENST00000579329 DPEP1P16444 411 aa31.05■■■□□ 2.56
LIMD2-207ENST00000579329 TTLL7Q6ZT98 887 aa31.05■■■□□ 2.56
LIMD2-207ENST00000579329 ADCY9O60503 1353 aa31.05■■■□□ 2.56
LIMD2-207ENST00000579329 CCER2I3L3R5 266 aa31.04■■■□□ 2.56
LIMD2-207ENST00000579329 HDGFL1Q5TGJ6 251 aa31.04■■■□□ 2.56
LIMD2-207ENST00000579329 GPBP1L1Q9HC44 474 aaPredicted RBP31.04■■■□□ 2.56
LIMD2-207ENST00000579329 PROSER3Q2NL68 480 aa31.03■■■□□ 2.56
LIMD2-207ENST00000579329 IFFO2Q5TF58 517 aa31.03■■■□□ 2.56
LIMD2-207ENST00000579329 LRP10Q7Z4F1 713 aa31.03■■■□□ 2.56
LIMD2-207ENST00000579329 DDX21Q9NR30 783 aaKnown RBP eCLIP31.03■■■□□ 2.56
LIMD2-207ENST00000579329 SALL2Q9Y467 1007 aaPredicted RBP31.03■■■□□ 2.56
LIMD2-207ENST00000579329 HLFQ16534 295 aa31.02■■■□□ 2.56
LIMD2-207ENST00000579329 WWC3Q9ULE0 1092 aa31.02■■■□□ 2.56
LIMD2-207ENST00000579329 ANXA1P04083 346 aa31.01■■■□□ 2.55
LIMD2-207ENST00000579329 ZNF526Q8TF50 670 aaPredicted RBP31.01■■■□□ 2.55
LIMD2-207ENST00000579329 NIP7Q9Y221 180 aaKnown RBP eCLIP31.01■■■□□ 2.55
LIMD2-207ENST00000579329 PRR5LQ6MZQ0 368 aa31■■■□□ 2.55
LIMD2-207ENST00000579329 CNBD1Q8NA66 436 aa31■■■□□ 2.55
LIMD2-207ENST00000579329 ZBTB3Q9H5J0 574 aa31■■■□□ 2.55
LIMD2-207ENST00000579329 NPHP1O15259 732 aa30.99■■■□□ 2.55
LIMD2-207ENST00000579329 WDR63Q8IWG1 891 aa30.99■■■□□ 2.55
LIMD2-207ENST00000579329 CHPF2Q9P2E5 772 aa30.99■■■□□ 2.55
LIMD2-207ENST00000579329 TSR2Q969E8 191 aaKnown RBP30.98■■■□□ 2.55
LIMD2-207ENST00000579329 DBF4Q9UBU7 674 aaPredicted RBP30.98■■■□□ 2.55
LIMD2-207ENST00000579329 NUP98P52948 1817 aa30.97■■■□□ 2.55
LIMD2-207ENST00000579329 CHRNA5P30532 468 aa30.97■■■□□ 2.55
LIMD2-207ENST00000579329 NBPF5PQ86XG9 351 aaPredicted RBP30.97■■■□□ 2.55
LIMD2-207ENST00000579329 BRCA1P38398 1863 aaKnown RBP30.97■■■□□ 2.55
LIMD2-207ENST00000579329 ELL2O00472 640 aaPredicted RBP30.96■■■□□ 2.55
LIMD2-207ENST00000579329 KCNA3P22001 575 aa30.96■■■□□ 2.55
LIMD2-207ENST00000579329 ST5P78524 1137 aa30.96■■■□□ 2.55
LIMD2-207ENST00000579329 DIEXFQ68CQ4 756 aaKnown RBP30.96■■■□□ 2.55
LIMD2-207ENST00000579329 C8orf58Q8NAV2 365 aa30.96■■■□□ 2.55
LIMD2-207ENST00000579329 PIM2Q9P1W9 311 aa30.96■■■□□ 2.55
LIMD2-207ENST00000579329 BCS1LQ9Y276 419 aa30.96■■■□□ 2.55
LIMD2-207ENST00000579329 GIGYF2Q6Y7W6 1299 aaKnown RBP30.95■■■□□ 2.55
LIMD2-207ENST00000579329 COPS6Q7L5N1 327 aa30.95■■■□□ 2.55
LIMD2-207ENST00000579329 XAGE3Q8WTP9 111 aa30.95■■■□□ 2.55
LIMD2-207ENST00000579329 BRIP1Q9BX63 1249 aa30.95■■■□□ 2.55
LIMD2-207ENST00000579329 AIMP1Q12904 312 aaKnown RBP30.94■■■□□ 2.54
LIMD2-207ENST00000579329 CHMP4AQ9BY43 222 aa30.94■■■□□ 2.54
LIMD2-207ENST00000579329 ANKRD31Q8N7Z5 1873 aa30.93■■■□□ 2.54
LIMD2-207ENST00000579329 TPTE2Q6XPS3 522 aa30.93■■■□□ 2.54
LIMD2-207ENST00000579329 CCDC24Q8N4L8 307 aa30.93■■■□□ 2.54
LIMD2-207ENST00000579329 PDZRN3Q9UPQ7 1066 aa30.93■■■□□ 2.54
LIMD2-207ENST00000579329 HSPA6P17066 643 aa30.92■■■□□ 2.54
LIMD2-207ENST00000579329 PDE6BP35913 854 aa30.92■■■□□ 2.54
LIMD2-207ENST00000579329 C2CD5Q86YS7 1000 aa30.92■■■□□ 2.54
LIMD2-207ENST00000579329 HYPKQ9NX55 129 aa30.92■■■□□ 2.54
LIMD2-207ENST00000579329 DALRD3Q5D0E6 543 aaKnown RBP30.91■■■□□ 2.54
LIMD2-207ENST00000579329 DLEC1Q9Y238 1755 aa30.91■■■□□ 2.54
LIMD2-207ENST00000579329 FAM177BA6PVY3 158 aa30.9■■■□□ 2.54
LIMD2-207ENST00000579329 H0YIN7 160 aa30.9■■■□□ 2.54
LIMD2-207ENST00000579329 TSPYL6Q8N831 410 aa30.9■■■□□ 2.54
LIMD2-207ENST00000579329 FANCIQ9NVI1 1328 aa30.9■■■□□ 2.54
LIMD2-207ENST00000579329 GPTP24298 496 aa30.89■■■□□ 2.54
LIMD2-207ENST00000579329 CCDC30Q5VVM6 783 aa30.89■■■□□ 2.54
LIMD2-207ENST00000579329 ZNF34Q8IZ26 560 aa30.89■■■□□ 2.54
LIMD2-207ENST00000579329 NYXQ9GZU5 481 aa30.89■■■□□ 2.54
LIMD2-207ENST00000579329 IBTKQ9P2D0 1353 aaPredicted RBP30.89■■■□□ 2.54
LIMD2-207ENST00000579329 HSP90AB3PQ58FF7 597 aa30.88■■■□□ 2.53
LIMD2-207ENST00000579329 UBN2Q6ZU65 1347 aa30.88■■■□□ 2.53
LIMD2-207ENST00000579329 GTF2E1P29083 439 aaPredicted RBP30.87■■■□□ 2.53
LIMD2-207ENST00000579329 TWISTNBQ3B726 338 aaPredicted RBP30.87■■■□□ 2.53
LIMD2-207ENST00000579329 ARFGEF1Q9Y6D6 1849 aa30.87■■■□□ 2.53
LIMD2-207ENST00000579329 PARP10Q53GL7 1025 aa30.86■■■□□ 2.53
LIMD2-207ENST00000579329 COL11A2P13942 1736 aaPredicted RBP30.85■■■□□ 2.53
LIMD2-207ENST00000579329 PLBD2Q8NHP8 589 aa30.85■■■□□ 2.53
LIMD2-207ENST00000579329 MYH16Q9H6N6 1097 aa30.85■■■□□ 2.53
LIMD2-207ENST00000579329 ANKRD36CQ5JPF3 1778 aa30.84■■■□□ 2.53
LIMD2-207ENST00000579329 ZNF521Q96K83 1311 aa30.84■■■□□ 2.53
LIMD2-207ENST00000579329 GOLGA2Q08379 1002 aa30.84■■■□□ 2.53
LIMD2-207ENST00000579329 SUSD4Q5VX71 490 aa30.83■■■□□ 2.53
LIMD2-207ENST00000579329 ANKRD13DQ6ZTN6 518 aa30.83■■■□□ 2.53
LIMD2-207ENST00000579329 PPP1R42Q7Z4L9 355 aa30.83■■■□□ 2.53
LIMD2-207ENST00000579329 TTLL6Q8N841 843 aa30.83■■■□□ 2.53
LIMD2-207ENST00000579329 TCIRG1Q13488 830 aa30.82■■■□□ 2.52
LIMD2-207ENST00000579329 ZNF622Q969S3 477 aaKnown RBP eCLIP30.82■■■□□ 2.52
LIMD2-207ENST00000579329 SPINK5Q9NQ38 1064 aaPredicted RBP30.82■■■□□ 2.52
LIMD2-207ENST00000579329 KIF3CO14782 793 aa30.81■■■□□ 2.52
LIMD2-207ENST00000579329 MIER1Q8N108 512 aa30.81■■■□□ 2.52
LIMD2-207ENST00000579329 STK31Q9BXU1 1019 aa30.81■■■□□ 2.52
LIMD2-207ENST00000579329 NTSR2O95665 410 aa30.8■■■□□ 2.52
LIMD2-207ENST00000579329 SRGNP10124 158 aa30.8■■■□□ 2.52
LIMD2-207ENST00000579329 ARHGAP27Q6ZUM4 889 aa30.8■■■□□ 2.52
LIMD2-207ENST00000579329 NUTM1Q86Y26 1132 aa30.8■■■□□ 2.52
LIMD2-207ENST00000579329 PHAXQ9H814 394 aaKnown RBP30.8■■■□□ 2.52
LIMD2-207ENST00000579329 ABCC12Q96J65 1359 aa30.79■■■□□ 2.52
LIMD2-207ENST00000579329 EXOSC9Q06265 439 aaKnown RBP30.79■■■□□ 2.52
LIMD2-207ENST00000579329 ERFEQ4G0M1 354 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms