RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 DDX21Q9NR30 783 aaKnown RBP eCLIP17.69■□□□□ 0.42
CSNK1D-209ENST00000578904 MSH5O43196 834 aa17.68■□□□□ 0.42
CSNK1D-209ENST00000578904 C4AP0C0L4 1744 aa17.68■□□□□ 0.42
CSNK1D-209ENST00000578904 EIF5P55010 431 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-209ENST00000578904 IRX6P78412 446 aaPredicted RBP17.68■□□□□ 0.42
CSNK1D-209ENST00000578904 PDIA6Q15084 440 aa17.68■□□□□ 0.42
CSNK1D-209ENST00000578904 TRAPPC3LQ5T215 181 aa17.68■□□□□ 0.42
CSNK1D-209ENST00000578904 HYPKQ9NX55 129 aa17.68■□□□□ 0.42
CSNK1D-209ENST00000578904 A0A087WZG4 1122 aa17.67■□□□□ 0.42
CSNK1D-209ENST00000578904 RFC4P35249 363 aa17.66■□□□□ 0.42
CSNK1D-209ENST00000578904 COL23A1Q86Y22 540 aaPredicted RBP17.66■□□□□ 0.42
CSNK1D-209ENST00000578904 ARXQ96QS3 562 aa17.66■□□□□ 0.42
CSNK1D-209ENST00000578904 KIF6Q6ZMV9 814 aa17.65■□□□□ 0.42
CSNK1D-209ENST00000578904 LRP10Q7Z4F1 713 aa17.65■□□□□ 0.42
CSNK1D-209ENST00000578904 DZIP3Q86Y13 1208 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-209ENST00000578904 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-209ENST00000578904 SCN7AQ01118 1682 aa17.64■□□□□ 0.42
CSNK1D-209ENST00000578904 DDX58O95786 925 aaKnown RBP17.64■□□□□ 0.41
CSNK1D-209ENST00000578904 TRIM27P14373 513 aa17.64■□□□□ 0.41
CSNK1D-209ENST00000578904 AIMP1Q12904 312 aaKnown RBP17.64■□□□□ 0.41
CSNK1D-209ENST00000578904 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.41
CSNK1D-209ENST00000578904 PPP4R2Q9NY27 417 aa17.64■□□□□ 0.41
CSNK1D-209ENST00000578904 USP42Q9H9J4 1324 aaKnown RBP17.64■□□□□ 0.41
CSNK1D-209ENST00000578904 CASZ1Q86V15 1759 aa17.63■□□□□ 0.41
CSNK1D-209ENST00000578904 ZPR1O75312 459 aa17.63■□□□□ 0.41
CSNK1D-209ENST00000578904 FLIIQ13045 1269 aa17.63■□□□□ 0.41
CSNK1D-209ENST00000578904 FKBP5Q13451 457 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-209ENST00000578904 COPS6Q7L5N1 327 aa17.63■□□□□ 0.41
CSNK1D-209ENST00000578904 DDX19BQ9UMR2 479 aa17.63■□□□□ 0.41
CSNK1D-209ENST00000578904 TBC1D2BQ9UPU7 963 aa17.63■□□□□ 0.41
CSNK1D-209ENST00000578904 BCORQ6W2J9 1755 aa17.63■□□□□ 0.41
CSNK1D-209ENST00000578904 TTLL7Q6ZT98 887 aa17.62■□□□□ 0.41
CSNK1D-209ENST00000578904 CLUAP1Q96AJ1 413 aa17.62■□□□□ 0.41
CSNK1D-209ENST00000578904 CRBNQ96SW2 442 aa17.62■□□□□ 0.41
CSNK1D-209ENST00000578904 PHAXQ9H814 394 aaKnown RBP17.62■□□□□ 0.41
CSNK1D-209ENST00000578904 SRP68Q9UHB9 627 aaKnown RBP17.62■□□□□ 0.41
CSNK1D-209ENST00000578904 NARFQ9UHQ1 456 aa17.62■□□□□ 0.41
CSNK1D-209ENST00000578904 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
CSNK1D-209ENST00000578904 USPL1Q5W0Q7 1092 aa17.61■□□□□ 0.41
CSNK1D-209ENST00000578904 PANK1Q8TE04 598 aa17.61■□□□□ 0.41
CSNK1D-209ENST00000578904 PDGFDQ9GZP0 370 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-209ENST00000578904 MAP3K15Q6ZN16 1313 aa17.61■□□□□ 0.41
CSNK1D-209ENST00000578904 CAMTA2O94983 1202 aa17.6■□□□□ 0.41
CSNK1D-209ENST00000578904 CCT4P50991 539 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-209ENST00000578904 C20orf194Q5TEA3 1177 aa17.6■□□□□ 0.41
CSNK1D-209ENST00000578904 G2E3Q7L622 706 aa17.6■□□□□ 0.41
CSNK1D-209ENST00000578904 ITPRIPQ8IWB1 547 aa17.6■□□□□ 0.41
CSNK1D-209ENST00000578904 ZBTB3Q9H5J0 574 aa17.6■□□□□ 0.41
CSNK1D-209ENST00000578904 COG6Q9Y2V7 657 aa17.6■□□□□ 0.41
CSNK1D-209ENST00000578904 ABCC4O15439 1325 aa17.59■□□□□ 0.41
CSNK1D-209ENST00000578904 YY1P25490 414 aa17.59■□□□□ 0.41
CSNK1D-209ENST00000578904 EXOC6Q8TAG9 804 aa17.59■□□□□ 0.41
CSNK1D-209ENST00000578904 ZNF652Q9Y2D9 606 aa17.59■□□□□ 0.41
CSNK1D-209ENST00000578904 GYS1P13807 737 aa17.58■□□□□ 0.4
CSNK1D-209ENST00000578904 MSL1Q68DK7 614 aa17.58■□□□□ 0.4
CSNK1D-209ENST00000578904 SLC16A10Q8TF71 515 aa17.58■□□□□ 0.4
CSNK1D-209ENST00000578904 PXDNLA1KZ92 1463 aa17.57■□□□□ 0.4
CSNK1D-209ENST00000578904 ERVV-1B6SEH8 477 aa17.57■□□□□ 0.4
CSNK1D-209ENST00000578904 ZBTB7AO95365 584 aa17.57■□□□□ 0.4
CSNK1D-209ENST00000578904 INTS3Q68E01 1043 aaKnown RBP17.57■□□□□ 0.4
CSNK1D-209ENST00000578904 ANKRD13DQ6ZTN6 518 aa17.57■□□□□ 0.4
CSNK1D-209ENST00000578904 RIC3Q7Z5B4 369 aa17.57■□□□□ 0.4
CSNK1D-209ENST00000578904 PLBD2Q8NHP8 589 aa17.57■□□□□ 0.4
CSNK1D-209ENST00000578904 N4BP2Q86UW6 1770 aaPredicted RBP17.57■□□□□ 0.4
CSNK1D-209ENST00000578904 ARFGEF2Q9Y6D5 1785 aa17.57■□□□□ 0.4
CSNK1D-209ENST00000578904 RGL2O15211 777 aa17.56■□□□□ 0.4
CSNK1D-209ENST00000578904 HLFQ16534 295 aa17.56■□□□□ 0.4
CSNK1D-209ENST00000578904 KSR2Q6VAB6 950 aa17.56■□□□□ 0.4
CSNK1D-209ENST00000578904 TMEM57Q8N5G2 664 aa17.56■□□□□ 0.4
CSNK1D-209ENST00000578904 BCL2L12Q9HB09 334 aa17.56■□□□□ 0.4
CSNK1D-209ENST00000578904 ADCY9O60503 1353 aa17.55■□□□□ 0.4
CSNK1D-209ENST00000578904 RLBP1P12271 317 aa17.55■□□□□ 0.4
CSNK1D-209ENST00000578904 SLC4A10Q6U841 1118 aa17.55■□□□□ 0.4
CSNK1D-209ENST00000578904 CLEC4GQ6UXB4 293 aa17.55■□□□□ 0.4
CSNK1D-209ENST00000578904 GIGYF2Q6Y7W6 1299 aaKnown RBP17.55■□□□□ 0.4
CSNK1D-209ENST00000578904 CCDC136Q96JN2 1154 aa17.55■□□□□ 0.4
CSNK1D-209ENST00000578904 MTFR1LQ9H019 292 aa17.55■□□□□ 0.4
CSNK1D-209ENST00000578904 PI4KAP2A4QPH2 592 aa17.54■□□□□ 0.4
CSNK1D-209ENST00000578904 NEXNQ0ZGT2 675 aa17.54■□□□□ 0.4
CSNK1D-209ENST00000578904 HSP90AB3PQ58FF7 597 aa17.54■□□□□ 0.4
CSNK1D-209ENST00000578904 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
CSNK1D-209ENST00000578904 PI4KAP1Q8N8J0 262 aa17.54■□□□□ 0.4
CSNK1D-209ENST00000578904 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
CSNK1D-209ENST00000578904 HDAC5Q9UQL6 1122 aa17.54■□□□□ 0.4
CSNK1D-209ENST00000578904 MAP3K2Q9Y2U5 619 aa17.54■□□□□ 0.4
CSNK1D-209ENST00000578904 ATP10DQ9P241 1426 aa17.54■□□□□ 0.4
CSNK1D-209ENST00000578904 NUP98P52948 1817 aa17.54■□□□□ 0.4
CSNK1D-209ENST00000578904 TBC1D9BQ66K14 1250 aa17.53■□□□□ 0.4
CSNK1D-209ENST00000578904 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
CSNK1D-209ENST00000578904 ANKRD36CQ5JPF3 1778 aa17.53■□□□□ 0.4
CSNK1D-209ENST00000578904 TNNQ9UQP3 1299 aa17.52■□□□□ 0.4
CSNK1D-209ENST00000578904 NIP7Q9Y221 180 aaKnown RBP eCLIP17.52■□□□□ 0.4
CSNK1D-209ENST00000578904 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.4
CSNK1D-209ENST00000578904 F6X3S4 739 aa17.51■□□□□ 0.39
CSNK1D-209ENST00000578904 MMP10P09238 476 aa17.51■□□□□ 0.39
CSNK1D-209ENST00000578904 GPTP24298 496 aa17.51■□□□□ 0.39
CSNK1D-209ENST00000578904 NFIXQ14938 502 aa17.51■□□□□ 0.39
CSNK1D-209ENST00000578904 SETDB2Q96T68 719 aa17.51■□□□□ 0.39
CSNK1D-209ENST00000578904 MYD88Q99836 296 aa17.51■□□□□ 0.39
CSNK1D-209ENST00000578904 METTL22Q9BUU2 404 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms