RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 COL15A1P39059 1388 aa8.71□□□□□ -1.02
UBB-208ENST00000578706 PRPF40BQ6NWY9 871 aaKnown RBP8.7□□□□□ -1.02
UBB-208ENST00000578706 SAPCD2Q86UD0 394 aa8.7□□□□□ -1.02
UBB-208ENST00000578706 C7orf43Q8WVR3 580 aa8.7□□□□□ -1.02
UBB-208ENST00000578706 CARD11Q9BXL7 1154 aa8.7□□□□□ -1.02
UBB-208ENST00000578706 NEUROD1Q13562 356 aa8.69□□□□□ -1.02
UBB-208ENST00000578706 DNAJC10Q8IXB1 793 aa8.69□□□□□ -1.02
UBB-208ENST00000578706 GCC1Q96CN9 775 aa8.69□□□□□ -1.02
UBB-208ENST00000578706 SNED1Q8TER0 1413 aa8.69□□□□□ -1.02
UBB-208ENST00000578706 FZD9O00144 591 aa8.68□□□□□ -1.02
UBB-208ENST00000578706 PRR5LQ6MZQ0 368 aa8.68□□□□□ -1.02
UBB-208ENST00000578706 OLFM4Q6UX06 510 aa8.68□□□□□ -1.02
UBB-208ENST00000578706 SIN3AQ96ST3 1273 aa8.68□□□□□ -1.02
UBB-208ENST00000578706 BRIP1Q9BX63 1249 aa8.68□□□□□ -1.02
UBB-208ENST00000578706 ZNF277Q9NRM2 450 aaPredicted RBP8.68□□□□□ -1.02
UBB-208ENST00000578706 TIMELESSQ9UNS1 1208 aa8.68□□□□□ -1.02
UBB-208ENST00000578706 ZBTB1Q9Y2K1 713 aa8.68□□□□□ -1.02
UBB-208ENST00000578706 TRIOBPQ9H2D6 2365 aa8.68□□□□□ -1.02
UBB-208ENST00000578706 CYP19A1P11511 503 aaPredicted RBP8.67□□□□□ -1.02
UBB-208ENST00000578706 HTTP42858 3142 aa8.67□□□□□ -1.02
UBB-208ENST00000578706 SCNN1DP51172 638 aa8.67□□□□□ -1.02
UBB-208ENST00000578706 DIEXFQ68CQ4 756 aaKnown RBP8.67□□□□□ -1.02
UBB-208ENST00000578706 BICDL1Q6ZP65 573 aa8.67□□□□□ -1.02
UBB-208ENST00000578706 GPC2Q8N158 579 aa8.67□□□□□ -1.02
UBB-208ENST00000578706 WASHC2AQ641Q2 1341 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 DLL1O00548 723 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 SLC24A1O60721 1099 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 SRGNP10124 158 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 PDE6BP35913 854 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 EPS15P42566 896 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 CABP4P57796 275 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 TBC1D9BQ66K14 1250 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 STYK1Q6J9G0 422 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 NBPF15Q8N660 670 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 NFATC2IPQ8NCF5 419 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 HHIPL1Q96JK4 782 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 HPS5Q9UPZ3 1129 aa8.66□□□□□ -1.02
UBB-208ENST00000578706 CEP290O15078 2479 aa8.65□□□□□ -1.02
UBB-208ENST00000578706 COL6A3P12111 3177 aa8.65□□□□□ -1.02
UBB-208ENST00000578706 AKAP11Q9UKA4 1901 aa8.65□□□□□ -1.02
UBB-208ENST00000578706 FKBP4Q02790 459 aaKnown RBP eCLIP8.65□□□□□ -1.02
UBB-208ENST00000578706 CNKSR1Q969H4 720 aa8.65□□□□□ -1.02
UBB-208ENST00000578706 TESK2Q96S53 571 aa8.65□□□□□ -1.02
UBB-208ENST00000578706 PDZRN3Q9UPQ7 1066 aa8.65□□□□□ -1.02
UBB-208ENST00000578706 UBR2Q8IWV8 1755 aa8.65□□□□□ -1.02
UBB-208ENST00000578706 CELF2O95319 508 aaKnown RBP8.64□□□□□ -1.03
UBB-208ENST00000578706 CCDC93Q567U6 631 aa8.64□□□□□ -1.03
UBB-208ENST00000578706 SOGA3Q5TF21 947 aa8.64□□□□□ -1.03
UBB-208ENST00000578706 BRCA2P51587 3418 aa8.63□□□□□ -1.03
UBB-208ENST00000578706 FAM155AB1AL88 458 aaPredicted RBP8.63□□□□□ -1.03
UBB-208ENST00000578706 HSP90AB1P08238 724 aaKnown RBP8.63□□□□□ -1.03
UBB-208ENST00000578706 IARSP41252 1262 aaKnown RBP8.63□□□□□ -1.03
UBB-208ENST00000578706 ZNF530Q6P9A1 599 aaPredicted RBP8.63□□□□□ -1.03
UBB-208ENST00000578706 CTU1Q7Z7A3 348 aaKnown RBP8.63□□□□□ -1.03
UBB-208ENST00000578706 MASTLQ96GX5 879 aa8.63□□□□□ -1.03
UBB-208ENST00000578706 GLIS2Q9BZE0 524 aaPredicted RBP8.63□□□□□ -1.03
UBB-208ENST00000578706 SAGE1Q9NXZ1 904 aa8.63□□□□□ -1.03
UBB-208ENST00000578706 MRC1P22897 1456 aa8.63□□□□□ -1.03
UBB-208ENST00000578706 RANBP2P49792 3224 aaKnown RBP8.63□□□□□ -1.03
UBB-208ENST00000578706 PPM1GO15355 546 aaPredicted RBP8.62□□□□□ -1.03
UBB-208ENST00000578706 EIF5P55010 431 aaKnown RBP8.62□□□□□ -1.03
UBB-208ENST00000578706 NOGQ13253 232 aa8.62□□□□□ -1.03
UBB-208ENST00000578706 EIF4A2Q14240 407 aaKnown RBP8.62□□□□□ -1.03
UBB-208ENST00000578706 GJA3Q9Y6H8 435 aa8.62□□□□□ -1.03
UBB-208ENST00000578706 CENPFP49454 3210 aa8.61□□□□□ -1.03
UBB-208ENST00000578706 ST20-MTHFSA0A0A6YYL1 179 aa8.61□□□□□ -1.03
UBB-208ENST00000578706 MTHFSP49914 203 aa8.61□□□□□ -1.03
UBB-208ENST00000578706 USP50Q70EL3 339 aaPredicted RBP8.61□□□□□ -1.03
UBB-208ENST00000578706 SLC51AQ86UW1 340 aa8.61□□□□□ -1.03
UBB-208ENST00000578706 CNBD1Q8NA66 436 aa8.61□□□□□ -1.03
UBB-208ENST00000578706 RNF186Q9NXI6 227 aa8.61□□□□□ -1.03
UBB-208ENST00000578706 RBBP6Q7Z6E9 1792 aaKnown RBP8.61□□□□□ -1.03
UBB-208ENST00000578706 TRPA1O75762 1119 aa8.6□□□□□ -1.03
UBB-208ENST00000578706 CANXP27824 592 aaKnown RBP8.6□□□□□ -1.03
UBB-208ENST00000578706 SLC39A6Q13433 755 aa8.6□□□□□ -1.03
UBB-208ENST00000578706 DLK2Q6UY11 383 aa8.6□□□□□ -1.03
UBB-208ENST00000578706 PPP4R3CPQ6ZMV5 832 aa8.6□□□□□ -1.03
UBB-208ENST00000578706 SYNE4Q8N205 404 aa8.6□□□□□ -1.03
UBB-208ENST00000578706 POLKQ9UBT6 870 aa8.6□□□□□ -1.03
UBB-208ENST00000578706 PAPPA2Q9BXP8 1791 aa8.6□□□□□ -1.03
UBB-208ENST00000578706 KLRG2A4D1S0 409 aaPredicted RBP8.59□□□□□ -1.03
UBB-208ENST00000578706 LMOD1P29536 600 aaPredicted RBP8.59□□□□□ -1.03
UBB-208ENST00000578706 KIF23Q02241 960 aaPredicted RBP8.59□□□□□ -1.03
UBB-208ENST00000578706 PLEKHO1Q53GL0 409 aaPredicted RBP8.59□□□□□ -1.03
UBB-208ENST00000578706 AEBP1Q8IUX7 1158 aa8.59□□□□□ -1.03
UBB-208ENST00000578706 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
UBB-208ENST00000578706 ZNF408Q9H9D4 720 aa8.59□□□□□ -1.03
UBB-208ENST00000578706 PGAP2Q9UHJ9 254 aa8.59□□□□□ -1.03
UBB-208ENST00000578706 KIAA0100Q14667 2235 aaKnown RBP8.59□□□□□ -1.03
UBB-208ENST00000578706 HIRAP54198 1017 aaPredicted RBP8.58□□□□□ -1.04
UBB-208ENST00000578706 HUNKP57058 714 aa8.58□□□□□ -1.04
UBB-208ENST00000578706 AKAP4Q5JQC9 854 aa8.58□□□□□ -1.04
UBB-208ENST00000578706 RTKN2Q8IZC4 609 aa8.58□□□□□ -1.04
UBB-208ENST00000578706 TBC1D2BQ9UPU7 963 aa8.58□□□□□ -1.04
UBB-208ENST00000578706 COLQQ9Y215 455 aaPredicted RBP8.58□□□□□ -1.04
UBB-208ENST00000578706 POLR2AP24928 1970 aaKnown RBP8.57□□□□□ -1.04
UBB-208ENST00000578706 CAMTA2O94983 1202 aa8.57□□□□□ -1.04
UBB-208ENST00000578706 NPR1P16066 1061 aa8.57□□□□□ -1.04
UBB-208ENST00000578706 EIF6P56537 245 aaKnown RBP8.57□□□□□ -1.04
UBB-208ENST00000578706 ST5P78524 1137 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms