RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 STARD3NLO95772 234 aa14.39□□□□□ -0.11
TRAPPC8-204ENST00000578252 ATP6V1AP38606 617 aa14.39□□□□□ -0.11
TRAPPC8-204ENST00000578252 BAG6P46379 1132 aa14.39□□□□□ -0.11
TRAPPC8-204ENST00000578252 KRT24Q2M2I5 525 aa14.39□□□□□ -0.11
TRAPPC8-204ENST00000578252 CCNL1Q9UK58 526 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC8-204ENST00000578252 ERBB4Q15303 1308 aa14.39□□□□□ -0.11
TRAPPC8-204ENST00000578252 ELL2O00472 640 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC8-204ENST00000578252 VAMP4O75379 141 aa14.38□□□□□ -0.11
TRAPPC8-204ENST00000578252 HDGFL1Q5TGJ6 251 aa14.38□□□□□ -0.11
TRAPPC8-204ENST00000578252 CCDC30Q5VVM6 783 aa14.38□□□□□ -0.11
TRAPPC8-204ENST00000578252 TSPYL6Q8N831 410 aa14.38□□□□□ -0.11
TRAPPC8-204ENST00000578252 RREB1Q92766 1687 aa14.38□□□□□ -0.11
TRAPPC8-204ENST00000578252 ALDH1L2Q3SY69 923 aa14.37□□□□□ -0.11
TRAPPC8-204ENST00000578252 DNAJC10Q8IXB1 793 aa14.37□□□□□ -0.11
TRAPPC8-204ENST00000578252 SLC4A9Q96Q91 983 aa14.37□□□□□ -0.11
TRAPPC8-204ENST00000578252 TXNRD1Q16881 649 aa14.36□□□□□ -0.11
TRAPPC8-204ENST00000578252 STK31Q9BXU1 1019 aa14.36□□□□□ -0.11
TRAPPC8-204ENST00000578252 C4BP0C0L5 1744 aa14.35□□□□□ -0.11
TRAPPC8-204ENST00000578252 ECM2O94769 699 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC8-204ENST00000578252 CYP19A1P11511 503 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC8-204ENST00000578252 EIF2S2P20042 333 aaKnown RBP14.35□□□□□ -0.11
TRAPPC8-204ENST00000578252 ITPK1Q13572 414 aa14.35□□□□□ -0.11
TRAPPC8-204ENST00000578252 DBF4Q9UBU7 674 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC8-204ENST00000578252 USP16Q9Y5T5 823 aa14.35□□□□□ -0.11
TRAPPC8-204ENST00000578252 CNTNAP4Q9C0A0 1308 aa14.35□□□□□ -0.11
TRAPPC8-204ENST00000578252 PRAMEF22A3QJZ6 481 aa14.34□□□□□ -0.11
TRAPPC8-204ENST00000578252 RARSP54136 660 aaKnown RBP14.34□□□□□ -0.11
TRAPPC8-204ENST00000578252 RC3H1Q5TC82 1133 aaKnown RBP14.34□□□□□ -0.11
TRAPPC8-204ENST00000578252 PDCD7Q8N8D1 485 aaKnown RBP14.34□□□□□ -0.11
TRAPPC8-204ENST00000578252 CAMKK2Q96RR4 588 aa14.34□□□□□ -0.11
TRAPPC8-204ENST00000578252 RCAN3Q9UKA8 241 aa14.34□□□□□ -0.11
TRAPPC8-204ENST00000578252 NUP188Q5SRE5 1749 aa14.33□□□□□ -0.12
TRAPPC8-204ENST00000578252 UPF1Q92900 1129 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRAPPC8-204ENST00000578252 DDX21Q9NR30 783 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRAPPC8-204ENST00000578252 CCDC87Q9NVE4 849 aa14.33□□□□□ -0.12
TRAPPC8-204ENST00000578252 HYPKQ9NX55 129 aa14.33□□□□□ -0.12
TRAPPC8-204ENST00000578252 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 CRKLP46109 303 aaKnown RBP14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 BRPF1P55201 1214 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 EN1Q05925 392 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 ILDR2Q71H61 639 aa14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 LINC00116Q8NCU8 138 aa14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 SSH1Q8WYL5 1049 aa14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 ZFP91Q96JP5 570 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 LRRC4BQ9NT99 713 aa14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 SMC4Q9NTJ3 1288 aa14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 MYH14Q7Z406 1995 aaKnown RBP14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 KIF16BQ96L93 1317 aa14.32□□□□□ -0.12
TRAPPC8-204ENST00000578252 NPM2Q86SE8 214 aaKnown RBP14.31□□□□□ -0.12
TRAPPC8-204ENST00000578252 NECTIN2Q92692 538 aa14.31□□□□□ -0.12
TRAPPC8-204ENST00000578252 CHPF2Q9P2E5 772 aa14.31□□□□□ -0.12
TRAPPC8-204ENST00000578252 A1BGP04217 495 aa14.3□□□□□ -0.12
TRAPPC8-204ENST00000578252 IL6STP40189 918 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC8-204ENST00000578252 EZH2Q15910 746 aaKnown RBP14.3□□□□□ -0.12
TRAPPC8-204ENST00000578252 AK7Q96M32 723 aa14.3□□□□□ -0.12
TRAPPC8-204ENST00000578252 QSER1Q2KHR3 1735 aa14.29□□□□□ -0.12
TRAPPC8-204ENST00000578252 UBR3Q6ZT12 1888 aa14.29□□□□□ -0.12
TRAPPC8-204ENST00000578252 KCNQ4P56696 695 aa14.29□□□□□ -0.12
TRAPPC8-204ENST00000578252 PDIA6Q15084 440 aa14.29□□□□□ -0.12
TRAPPC8-204ENST00000578252 INTS5Q6P9B9 1019 aaKnown RBP14.29□□□□□ -0.12
TRAPPC8-204ENST00000578252 DEFB132Q7Z7B7 95 aa14.29□□□□□ -0.12
TRAPPC8-204ENST00000578252 MRPL50Q8N5N7 158 aaKnown RBP14.29□□□□□ -0.12
TRAPPC8-204ENST00000578252 ZBTB1Q9Y2K1 713 aa14.29□□□□□ -0.12
TRAPPC8-204ENST00000578252 A0A087WZG4 1122 aa14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 NBPF26B4DH59 902 aa14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 IPO8O15397 1037 aaKnown RBP14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 RPS6KA4O75676 772 aa14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 PTPRCP08575 1304 aa14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 MYL6BP14649 208 aa14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 CANXP27824 592 aaKnown RBP14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 NBPF14Q5TI25 921 aa14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 NBPF10Q6P3W6 841 aaKnown RBP14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 NBPF15Q8N660 670 aa14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 BCL2L13Q9BXK5 485 aa14.28□□□□□ -0.12
TRAPPC8-204ENST00000578252 TCERG1O14776 1098 aaKnown RBP14.27□□□□□ -0.13
TRAPPC8-204ENST00000578252 GNPATO15228 680 aa14.27□□□□□ -0.13
TRAPPC8-204ENST00000578252 DDX58O95786 925 aaKnown RBP14.27□□□□□ -0.13
TRAPPC8-204ENST00000578252 EFCAB3Q8N7B9 438 aa14.27□□□□□ -0.13
TRAPPC8-204ENST00000578252 RTCBQ9Y3I0 505 aaKnown RBP14.27□□□□□ -0.13
TRAPPC8-204ENST00000578252 COL15A1P39059 1388 aa14.26□□□□□ -0.13
TRAPPC8-204ENST00000578252 BCAR3O75815 825 aa14.26□□□□□ -0.13
TRAPPC8-204ENST00000578252 SSFA2P28290 1259 aa14.26□□□□□ -0.13
TRAPPC8-204ENST00000578252 EIF5P55010 431 aaKnown RBP14.26□□□□□ -0.13
TRAPPC8-204ENST00000578252 FLIIQ13045 1269 aa14.26□□□□□ -0.13
TRAPPC8-204ENST00000578252 PROSER3Q2NL68 480 aa14.26□□□□□ -0.13
TRAPPC8-204ENST00000578252 LRP10Q7Z4F1 713 aa14.26□□□□□ -0.13
TRAPPC8-204ENST00000578252 FLAD1Q8NFF5 587 aa14.26□□□□□ -0.13
TRAPPC8-204ENST00000578252 ARHGAP45Q92619 1136 aa14.26□□□□□ -0.13
TRAPPC8-204ENST00000578252 STK32BQ9NY57 414 aa14.26□□□□□ -0.13
TRAPPC8-204ENST00000578252 TUBGCP6Q96RT7 1819 aa14.26□□□□□ -0.13
TRAPPC8-204ENST00000578252 BCORQ6W2J9 1755 aa14.25□□□□□ -0.13
TRAPPC8-204ENST00000578252 C4AP0C0L4 1744 aa14.25□□□□□ -0.13
TRAPPC8-204ENST00000578252 ANXA1P04083 346 aa14.25□□□□□ -0.13
TRAPPC8-204ENST00000578252 PIP4K2AP48426 406 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC8-204ENST00000578252 KIF6Q6ZMV9 814 aa14.25□□□□□ -0.13
TRAPPC8-204ENST00000578252 API5Q9BZZ5 524 aaKnown RBP14.25□□□□□ -0.13
TRAPPC8-204ENST00000578252 SCN7AQ01118 1682 aa14.25□□□□□ -0.13
TRAPPC8-204ENST00000578252 ARFGEF2Q9Y6D5 1785 aa14.24□□□□□ -0.13
TRAPPC8-204ENST00000578252 RGL2O15211 777 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms