RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 PLSCR1O15162 318 aa5.76□□□□□ -1.49
PTPRM-206ENST00000578093 DDB1Q16531 1140 aa5.76□□□□□ -1.49
PTPRM-206ENST00000578093 NLRP13Q86W25 1043 aa5.76□□□□□ -1.49
PTPRM-206ENST00000578093 MRPL50Q8N5N7 158 aaKnown RBP5.76□□□□□ -1.49
PTPRM-206ENST00000578093 ZNF784Q8NCA9 323 aaPredicted RBP5.76□□□□□ -1.49
PTPRM-206ENST00000578093 KDM4CQ9H3R0 1056 aa5.76□□□□□ -1.49
PTPRM-206ENST00000578093 LY75O60449 1722 aa5.76□□□□□ -1.49
PTPRM-206ENST00000578093 FAM208AQ9UK61 1670 aaKnown RBP5.75□□□□□ -1.49
PTPRM-206ENST00000578093 CENPJQ9HC77 1338 aaPredicted RBP5.75□□□□□ -1.49
PTPRM-206ENST00000578093 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
PTPRM-206ENST00000578093 GOLGA8CPA6NN73 597 aa5.75□□□□□ -1.49
PTPRM-206ENST00000578093 SRPK2P78362 688 aaKnown RBP5.75□□□□□ -1.49
PTPRM-206ENST00000578093 TXNRD1Q16881 649 aa5.75□□□□□ -1.49
PTPRM-206ENST00000578093 GIGYF2Q6Y7W6 1299 aaKnown RBP5.75□□□□□ -1.49
PTPRM-206ENST00000578093 TOM1L2Q6ZVM7 507 aa5.75□□□□□ -1.49
PTPRM-206ENST00000578093 PARP9Q8IXQ6 854 aa5.75□□□□□ -1.49
PTPRM-206ENST00000578093 PHOX2BQ99453 314 aa5.75□□□□□ -1.49
PTPRM-206ENST00000578093 KRTAP9-9Q9BYP9 154 aa5.75□□□□□ -1.49
PTPRM-206ENST00000578093 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
PTPRM-206ENST00000578093 FHDC1Q9C0D6 1143 aaPredicted RBP5.75□□□□□ -1.49
PTPRM-206ENST00000578093 GPBP1L1Q9HC44 474 aaPredicted RBP5.75□□□□□ -1.49
PTPRM-206ENST00000578093 KAT6BQ8WYB5 2073 aa5.75□□□□□ -1.49
PTPRM-206ENST00000578093 SLC15A2Q16348 729 aa5.74□□□□□ -1.49
PTPRM-206ENST00000578093 ZNF827Q17R98 1081 aa5.74□□□□□ -1.49
PTPRM-206ENST00000578093 TMEM132AQ24JP5 1023 aa5.74□□□□□ -1.49
PTPRM-206ENST00000578093 ARHGEF25Q86VW2 580 aa5.74□□□□□ -1.49
PTPRM-206ENST00000578093 SULF1Q8IWU6 871 aa5.74□□□□□ -1.49
PTPRM-206ENST00000578093 DDRGK1Q96HY6 314 aa5.74□□□□□ -1.49
PTPRM-206ENST00000578093 SYT17Q9BSW7 474 aa5.74□□□□□ -1.49
PTPRM-206ENST00000578093 TMEM134Q9H6X4 195 aa5.74□□□□□ -1.49
PTPRM-206ENST00000578093 CABP1Q9NZU7 370 aa5.74□□□□□ -1.49
PTPRM-206ENST00000578093 SEPT9Q9UHD8 586 aaPredicted RBP5.74□□□□□ -1.49
PTPRM-206ENST00000578093 BRD4O60885 1362 aaPredicted RBP5.74□□□□□ -1.49
PTPRM-206ENST00000578093 CD163L1Q9NR16 1453 aa5.74□□□□□ -1.49
PTPRM-206ENST00000578093 SENP3-EIF4A1A0A087X0R7 540 aa5.73□□□□□ -1.49
PTPRM-206ENST00000578093 SSTR3P32745 418 aaPredicted RBP5.73□□□□□ -1.49
PTPRM-206ENST00000578093 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
PTPRM-206ENST00000578093 NECTIN2Q92692 538 aa5.73□□□□□ -1.49
PTPRM-206ENST00000578093 ACSBG1Q96GR2 724 aa5.73□□□□□ -1.49
PTPRM-206ENST00000578093 TMUB1Q9BVT8 246 aa5.73□□□□□ -1.49
PTPRM-206ENST00000578093 TOGARAM1Q9Y4F4 1720 aa5.73□□□□□ -1.49
PTPRM-206ENST00000578093 TTC21BQ7Z4L5 1316 aa5.73□□□□□ -1.49
PTPRM-206ENST00000578093 C5P01031 1676 aa5.72□□□□□ -1.49
PTPRM-206ENST00000578093 TAF1LQ8IZX4 1826 aa5.72□□□□□ -1.49
PTPRM-206ENST00000578093 CCDC7Q96M83 1385 aa5.72□□□□□ -1.49
PTPRM-206ENST00000578093 MAP3K5Q99683 1374 aa5.72□□□□□ -1.49
PTPRM-206ENST00000578093 C11orf95C9JLR9 678 aaPredicted RBP5.72□□□□□ -1.49
PTPRM-206ENST00000578093 C3orf80F5H4A9 247 aa5.72□□□□□ -1.49
PTPRM-206ENST00000578093 NLRP7Q8WX94 980 aa5.72□□□□□ -1.49
PTPRM-206ENST00000578093 REPIN1Q9BWE0 567 aaKnown RBP5.72□□□□□ -1.49
PTPRM-206ENST00000578093 CARD10Q9BWT7 1032 aa5.72□□□□□ -1.49
PTPRM-206ENST00000578093 MTFR1LQ9H019 292 aa5.72□□□□□ -1.49
PTPRM-206ENST00000578093 FAM217BQ9NTX9 383 aaPredicted RBP5.72□□□□□ -1.49
PTPRM-206ENST00000578093 STK32BQ9NY57 414 aa5.72□□□□□ -1.49
PTPRM-206ENST00000578093 NSD2O96028 1365 aa5.71□□□□□ -1.5
PTPRM-206ENST00000578093 DDX11L8A8MPP1 907 aa5.71□□□□□ -1.5
PTPRM-206ENST00000578093 CSB-PGBD3P0DP91 1061 aa5.71□□□□□ -1.5
PTPRM-206ENST00000578093 LORP23490 312 aaPredicted RBP5.71□□□□□ -1.5
PTPRM-206ENST00000578093 C1QTNF8P60827 252 aa5.71□□□□□ -1.5
PTPRM-206ENST00000578093 SWT1Q5T5J6 900 aaKnown RBP5.71□□□□□ -1.5
PTPRM-206ENST00000578093 SLF2Q8IX21 1173 aa5.71□□□□□ -1.5
PTPRM-206ENST00000578093 RDH13Q8NBN7 331 aa5.71□□□□□ -1.5
PTPRM-206ENST00000578093 IL27Q8NEV9 243 aa5.71□□□□□ -1.5
PTPRM-206ENST00000578093 ZFRQ96KR1 1074 aaKnown RBP5.71□□□□□ -1.5
PTPRM-206ENST00000578093 LRRC4BQ9NT99 713 aa5.71□□□□□ -1.5
PTPRM-206ENST00000578093 KTN1Q86UP2 1357 aaKnown RBP5.7□□□□□ -1.5
PTPRM-206ENST00000578093 SBNO2Q9Y2G9 1366 aa5.7□□□□□ -1.5
PTPRM-206ENST00000578093 MS4A1P11836 297 aa5.7□□□□□ -1.5
PTPRM-206ENST00000578093 DIXDC1Q155Q3 683 aa5.7□□□□□ -1.5
PTPRM-206ENST00000578093 SAMD7Q7Z3H4 446 aa5.7□□□□□ -1.5
PTPRM-206ENST00000578093 ANKK1Q8NFD2 765 aa5.7□□□□□ -1.5
PTPRM-206ENST00000578093 NLGN2Q8NFZ4 835 aa5.7□□□□□ -1.5
PTPRM-206ENST00000578093 LRCH3Q96II8 777 aa5.7□□□□□ -1.5
PTPRM-206ENST00000578093 ARXQ96QS3 562 aa5.7□□□□□ -1.5
PTPRM-206ENST00000578093 CDCA7Q9BWT1 371 aaPredicted RBP5.7□□□□□ -1.5
PTPRM-206ENST00000578093 PNPLA7Q6ZV29 1317 aa5.7□□□□□ -1.5
PTPRM-206ENST00000578093 TTC21AQ8NDW8 1320 aa5.7□□□□□ -1.5
PTPRM-206ENST00000578093 ITGB4P16144 1822 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 MEGF6O75095 1541 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 USP31Q70CQ4 1352 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 FAM181BA6NEQ2 426 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 EXOC5O00471 708 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 RNF40O75150 1001 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 KCNQ4P56696 695 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 NME9Q86XW9 330 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 BEGAINQ9BUH8 593 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 FAM117AQ9C073 453 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 RSPH6AQ9H0K4 717 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.69□□□□□ -1.5
PTPRM-206ENST00000578093 EVC2Q86UK5 1308 aa5.69□□□□□ -1.5
PTPRM-206ENST00000578093 UBR3Q6ZT12 1888 aa5.68□□□□□ -1.5
PTPRM-206ENST00000578093 ROCK2O75116 1388 aaKnown RBP5.68□□□□□ -1.5
PTPRM-206ENST00000578093 KIAA1551Q9HCM1 1747 aa5.68□□□□□ -1.5
PTPRM-206ENST00000578093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPRM-206ENST00000578093 KCNH5Q8NCM2 988 aa5.68□□□□□ -1.5
PTPRM-206ENST00000578093 ANKRD24Q8TF21 1146 aa5.68□□□□□ -1.5
PTPRM-206ENST00000578093 L3MBTL2Q969R5 705 aa5.68□□□□□ -1.5
PTPRM-206ENST00000578093 A0A1W2PP64 1363 aa5.67□□□□□ -1.5
PTPRM-206ENST00000578093 KIF20BQ96Q89 1820 aa5.67□□□□□ -1.5
PTPRM-206ENST00000578093 GIGYF1O75420 1035 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms