RNA–Protein interactions for RNA: ENST00000578085.1

CCR7-202, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 3

Gene CCR7, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-202ENST00000578085 CNBD1Q8NA66 436 aa9.92□□□□□ -0.82
CCR7-202ENST00000578085 TEX13AQ9BXU3 409 aaPredicted RBP9.92□□□□□ -0.82
CCR7-202ENST00000578085 ARFGEF2Q9Y6D5 1785 aa9.92□□□□□ -0.82
CCR7-202ENST00000578085 CACNA1SQ13698 1873 aa9.91□□□□□ -0.82
CCR7-202ENST00000578085 CCDC88AQ3V6T2 1871 aa9.91□□□□□ -0.82
CCR7-202ENST00000578085 PDE6BP35913 854 aa9.91□□□□□ -0.82
CCR7-202ENST00000578085 OLFM4Q6UX06 510 aa9.91□□□□□ -0.82
CCR7-202ENST00000578085 SLC51AQ86UW1 340 aa9.91□□□□□ -0.82
CCR7-202ENST00000578085 LTBP3Q9NS15 1303 aa9.9□□□□□ -0.82
CCR7-202ENST00000578085 DDNO94850 711 aaPredicted RBP9.9□□□□□ -0.82
CCR7-202ENST00000578085 U2AF1L5P0DN76 240 aaPredicted RBP9.9□□□□□ -0.82
CCR7-202ENST00000578085 U2AF1Q01081 240 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCR7-202ENST00000578085 ERFEQ4G0M1 354 aa9.9□□□□□ -0.82
CCR7-202ENST00000578085 STYK1Q6J9G0 422 aa9.9□□□□□ -0.82
CCR7-202ENST00000578085 C7orf43Q8WVR3 580 aa9.9□□□□□ -0.82
CCR7-202ENST00000578085 SETDB2Q96T68 719 aa9.9□□□□□ -0.82
CCR7-202ENST00000578085 TAOK3Q9H2K8 898 aa9.9□□□□□ -0.82
CCR7-202ENST00000578085 ABCC12Q96J65 1359 aa9.89□□□□□ -0.83
CCR7-202ENST00000578085 ST5P78524 1137 aa9.89□□□□□ -0.83
CCR7-202ENST00000578085 HLFQ16534 295 aa9.89□□□□□ -0.83
CCR7-202ENST00000578085 CFAP53Q96M91 514 aa9.89□□□□□ -0.83
CCR7-202ENST00000578085 MIS18AQ9NYP9 233 aa9.89□□□□□ -0.83
CCR7-202ENST00000578085 SNED1Q8TER0 1413 aa9.89□□□□□ -0.83
CCR7-202ENST00000578085 LAMB4A4D0S4 1761 aa9.88□□□□□ -0.83
CCR7-202ENST00000578085 DICER1Q9UPY3 1922 aaKnown RBP9.88□□□□□ -0.83
CCR7-202ENST00000578085 COL4A5P29400 1685 aa9.88□□□□□ -0.83
CCR7-202ENST00000578085 KLRG2A4D1S0 409 aaPredicted RBP9.88□□□□□ -0.83
CCR7-202ENST00000578085 FAM177BA6PVY3 158 aa9.88□□□□□ -0.83
CCR7-202ENST00000578085 SNRPA1P09661 255 aaKnown RBP9.88□□□□□ -0.83
CCR7-202ENST00000578085 NBPF5PQ86XG9 351 aaPredicted RBP9.88□□□□□ -0.83
CCR7-202ENST00000578085 CNKSR1Q969H4 720 aa9.88□□□□□ -0.83
CCR7-202ENST00000578085 MASTLQ96GX5 879 aa9.88□□□□□ -0.83
CCR7-202ENST00000578085 PDZRN3Q9UPQ7 1066 aa9.88□□□□□ -0.83
CCR7-202ENST00000578085 KDM3BQ7LBC6 1761 aa9.88□□□□□ -0.83
CCR7-202ENST00000578085 ZNF541Q9H0D2 1346 aa9.87□□□□□ -0.83
CCR7-202ENST00000578085 HSPA1AP0DMV8 641 aaKnown RBP9.87□□□□□ -0.83
CCR7-202ENST00000578085 HSPA1BP0DMV9 641 aaKnown RBP9.87□□□□□ -0.83
CCR7-202ENST00000578085 CLEC4GQ6UXB4 293 aa9.87□□□□□ -0.83
CCR7-202ENST00000578085 THUMPD2Q9BTF0 503 aaKnown RBP9.87□□□□□ -0.83
CCR7-202ENST00000578085 ZNF277Q9NRM2 450 aaPredicted RBP9.87□□□□□ -0.83
CCR7-202ENST00000578085 NPHP1O15259 732 aa9.86□□□□□ -0.83
CCR7-202ENST00000578085 DPY19L2Q6NUT2 758 aa9.86□□□□□ -0.83
CCR7-202ENST00000578085 RTF1Q92541 710 aaKnown RBP9.86□□□□□ -0.83
CCR7-202ENST00000578085 NIP7Q9Y221 180 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCR7-202ENST00000578085 NUDCQ9Y266 331 aa9.86□□□□□ -0.83
CCR7-202ENST00000578085 ADAMTSL1Q8N6G6 1762 aa9.86□□□□□ -0.83
CCR7-202ENST00000578085 NPR1P16066 1061 aa9.85□□□□□ -0.83
CCR7-202ENST00000578085 FKBP4Q02790 459 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCR7-202ENST00000578085 CCDC93Q567U6 631 aa9.85□□□□□ -0.83
CCR7-202ENST00000578085 CHADLQ6NUI6 762 aa9.85□□□□□ -0.83
CCR7-202ENST00000578085 TTLL7Q6ZT98 887 aa9.85□□□□□ -0.83
CCR7-202ENST00000578085 NPM2Q86SE8 214 aaKnown RBP9.85□□□□□ -0.83
CCR7-202ENST00000578085 NUTM1Q86Y26 1132 aa9.85□□□□□ -0.83
CCR7-202ENST00000578085 PLEKHF1Q96S99 279 aa9.85□□□□□ -0.83
CCR7-202ENST00000578085 MKRN1Q9UHC7 482 aaKnown RBP9.85□□□□□ -0.83
CCR7-202ENST00000578085 UBN2Q6ZU65 1347 aa9.84□□□□□ -0.83
CCR7-202ENST00000578085 DLG5Q8TDM6 1919 aa9.84□□□□□ -0.83
CCR7-202ENST00000578085 HTATSF1O43719 755 aaKnown RBP9.84□□□□□ -0.83
CCR7-202ENST00000578085 CAPN15O75808 1086 aa9.84□□□□□ -0.83
CCR7-202ENST00000578085 TAF7Q15545 349 aaPredicted RBP9.84□□□□□ -0.83
CCR7-202ENST00000578085 NGEFQ8N5V2 710 aa9.84□□□□□ -0.83
CCR7-202ENST00000578085 L3MBTL3Q96JM7 780 aaPredicted RBP9.84□□□□□ -0.83
CCR7-202ENST00000578085 TAF1DQ9H5J8 278 aaPredicted RBP9.84□□□□□ -0.83
CCR7-202ENST00000578085 ZNF652Q9Y2D9 606 aa9.84□□□□□ -0.83
CCR7-202ENST00000578085 PASKQ96RG2 1323 aa9.83□□□□□ -0.84
CCR7-202ENST00000578085 LTBP1Q14766 1721 aa9.83□□□□□ -0.84
CCR7-202ENST00000578085 RGL2O15211 777 aa9.83□□□□□ -0.84
CCR7-202ENST00000578085 EIF4A1P60842 406 aaKnown RBP9.83□□□□□ -0.84
CCR7-202ENST00000578085 CRY2Q49AN0 593 aa9.83□□□□□ -0.84
CCR7-202ENST00000578085 SOGA3Q5TF21 947 aa9.83□□□□□ -0.84
CCR7-202ENST00000578085 TPTE2Q6XPS3 522 aa9.83□□□□□ -0.84
CCR7-202ENST00000578085 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
CCR7-202ENST00000578085 TNS4Q8IZW8 715 aa9.83□□□□□ -0.84
CCR7-202ENST00000578085 CREBZFQ9NS37 354 aa9.83□□□□□ -0.84
CCR7-202ENST00000578085 RNF123Q5XPI4 1314 aa9.82□□□□□ -0.84
CCR7-202ENST00000578085 RIC1Q4ADV7 1423 aa9.82□□□□□ -0.84
CCR7-202ENST00000578085 GPTP24298 496 aa9.82□□□□□ -0.84
CCR7-202ENST00000578085 LRP10Q7Z4F1 713 aa9.82□□□□□ -0.84
CCR7-202ENST00000578085 ZBTB3Q9H5J0 574 aa9.82□□□□□ -0.84
CCR7-202ENST00000578085 CNTNAP1P78357 1384 aa9.82□□□□□ -0.84
CCR7-202ENST00000578085 MAP3K15Q6ZN16 1313 aa9.82□□□□□ -0.84
CCR7-202ENST00000578085 FZD9O00144 591 aa9.81□□□□□ -0.84
CCR7-202ENST00000578085 ITGBL1O95965 494 aaPredicted RBP9.81□□□□□ -0.84
CCR7-202ENST00000578085 MYL6BP14649 208 aa9.81□□□□□ -0.84
CCR7-202ENST00000578085 IARSP41252 1262 aaKnown RBP9.81□□□□□ -0.84
CCR7-202ENST00000578085 NFE2L2Q16236 605 aa9.81□□□□□ -0.84
CCR7-202ENST00000578085 SUSD4Q5VX71 490 aa9.81□□□□□ -0.84
CCR7-202ENST00000578085 LDHDQ86WU2 507 aa9.81□□□□□ -0.84
CCR7-202ENST00000578085 SYNE4Q8N205 404 aa9.81□□□□□ -0.84
CCR7-202ENST00000578085 RRP7AQ9Y3A4 280 aaKnown RBP9.81□□□□□ -0.84
CCR7-202ENST00000578085 SCN4AP35499 1836 aa9.81□□□□□ -0.84
CCR7-202ENST00000578085 NUP98P52948 1817 aa9.8□□□□□ -0.84
CCR7-202ENST00000578085 IBTKQ9P2D0 1353 aaPredicted RBP9.8□□□□□ -0.84
CCR7-202ENST00000578085 IQCA1LA6NCM1 817 aa9.8□□□□□ -0.84
CCR7-202ENST00000578085 ERVV-1B6SEH8 477 aa9.8□□□□□ -0.84
CCR7-202ENST00000578085 NTSR2O95665 410 aa9.8□□□□□ -0.84
CCR7-202ENST00000578085 PROSER3Q2NL68 480 aa9.8□□□□□ -0.84
CCR7-202ENST00000578085 EAPPQ56P03 285 aaPredicted RBP9.8□□□□□ -0.84
CCR7-202ENST00000578085 RTKN2Q8IZC4 609 aa9.8□□□□□ -0.84
CCR7-202ENST00000578085 FOXN1O15353 648 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms