RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 DDX21Q9NR30 783 aaKnown RBP eCLIP30.47■■■□□ 2.47
SNF8-217ENST00000576353 WWC3Q9ULE0 1092 aa30.47■■■□□ 2.47
SNF8-217ENST00000576353 NIP7Q9Y221 180 aaKnown RBP eCLIP30.47■■■□□ 2.47
SNF8-217ENST00000576353 IL16Q14005 1332 aa30.47■■■□□ 2.47
SNF8-217ENST00000576353 NPHP1O15259 732 aa30.46■■■□□ 2.47
SNF8-217ENST00000576353 LRP10Q7Z4F1 713 aa30.46■■■□□ 2.47
SNF8-217ENST00000576353 SALL2Q9Y467 1007 aaPredicted RBP30.46■■■□□ 2.47
SNF8-217ENST00000576353 CCER2I3L3R5 266 aa30.45■■■□□ 2.47
SNF8-217ENST00000576353 YY1P25490 414 aa30.45■■■□□ 2.47
SNF8-217ENST00000576353 PROSER3Q2NL68 480 aa30.45■■■□□ 2.47
SNF8-217ENST00000576353 PRR5LQ6MZQ0 368 aa30.45■■■□□ 2.47
SNF8-217ENST00000576353 PIM2Q9P1W9 311 aa30.45■■■□□ 2.47
SNF8-217ENST00000576353 BCORQ6W2J9 1755 aa30.44■■■□□ 2.46
SNF8-217ENST00000576353 KCNA3P22001 575 aa30.44■■■□□ 2.46
SNF8-217ENST00000576353 NBPF5PQ86XG9 351 aaPredicted RBP30.44■■■□□ 2.46
SNF8-217ENST00000576353 WDR63Q8IWG1 891 aa30.44■■■□□ 2.46
SNF8-217ENST00000576353 CNBD1Q8NA66 436 aa30.44■■■□□ 2.46
SNF8-217ENST00000576353 CHMP4AQ9BY43 222 aa30.44■■■□□ 2.46
SNF8-217ENST00000576353 DBF4Q9UBU7 674 aaPredicted RBP30.44■■■□□ 2.46
SNF8-217ENST00000576353 ANXA1P04083 346 aa30.43■■■□□ 2.46
SNF8-217ENST00000576353 BRIP1Q9BX63 1249 aa30.43■■■□□ 2.46
SNF8-217ENST00000576353 ZBTB3Q9H5J0 574 aa30.43■■■□□ 2.46
SNF8-217ENST00000576353 NRXN2Q9P2S2 1712 aa30.43■■■□□ 2.46
SNF8-217ENST00000576353 CHRNA5P30532 468 aa30.42■■■□□ 2.46
SNF8-217ENST00000576353 ST5P78524 1137 aa30.42■■■□□ 2.46
SNF8-217ENST00000576353 CHPF2Q9P2E5 772 aa30.42■■■□□ 2.46
SNF8-217ENST00000576353 PDZRN3Q9UPQ7 1066 aa30.42■■■□□ 2.46
SNF8-217ENST00000576353 BCS1LQ9Y276 419 aa30.42■■■□□ 2.46
SNF8-217ENST00000576353 ELL2O00472 640 aaPredicted RBP30.41■■■□□ 2.46
SNF8-217ENST00000576353 TPTE2Q6XPS3 522 aa30.41■■■□□ 2.46
SNF8-217ENST00000576353 COPS6Q7L5N1 327 aa30.41■■■□□ 2.46
SNF8-217ENST00000576353 PDE6BP35913 854 aa30.4■■■□□ 2.46
SNF8-217ENST00000576353 GIGYF2Q6Y7W6 1299 aaKnown RBP30.4■■■□□ 2.46
SNF8-217ENST00000576353 C8orf58Q8NAV2 365 aa30.4■■■□□ 2.46
SNF8-217ENST00000576353 XAGE3Q8WTP9 111 aa30.4■■■□□ 2.46
SNF8-217ENST00000576353 TSR2Q969E8 191 aaKnown RBP30.4■■■□□ 2.46
SNF8-217ENST00000576353 AFDNP55196 1824 aaKnown RBP30.39■■■□□ 2.46
SNF8-217ENST00000576353 H0YIN7 160 aa30.39■■■□□ 2.46
SNF8-217ENST00000576353 AIMP1Q12904 312 aaKnown RBP30.39■■■□□ 2.46
SNF8-217ENST00000576353 DALRD3Q5D0E6 543 aaKnown RBP30.39■■■□□ 2.46
SNF8-217ENST00000576353 HYPKQ9NX55 129 aa30.39■■■□□ 2.46
SNF8-217ENST00000576353 KIAA1551Q9HCM1 1747 aa30.39■■■□□ 2.45
SNF8-217ENST00000576353 C2CD5Q86YS7 1000 aa30.38■■■□□ 2.45
SNF8-217ENST00000576353 ATP10DQ9P241 1426 aa30.38■■■□□ 2.45
SNF8-217ENST00000576353 N4BP2Q86UW6 1770 aaPredicted RBP30.37■■■□□ 2.45
SNF8-217ENST00000576353 DIEXFQ68CQ4 756 aaKnown RBP30.37■■■□□ 2.45
SNF8-217ENST00000576353 CCDC24Q8N4L8 307 aa30.37■■■□□ 2.45
SNF8-217ENST00000576353 NYXQ9GZU5 481 aa30.36■■■□□ 2.45
SNF8-217ENST00000576353 FAM177BA6PVY3 158 aa30.35■■■□□ 2.45
SNF8-217ENST00000576353 GTF2E1P29083 439 aaPredicted RBP30.35■■■□□ 2.45
SNF8-217ENST00000576353 ZNF34Q8IZ26 560 aa30.35■■■□□ 2.45
SNF8-217ENST00000576353 HSP90AB3PQ58FF7 597 aa30.34■■■□□ 2.45
SNF8-217ENST00000576353 CCDC30Q5VVM6 783 aa30.34■■■□□ 2.45
SNF8-217ENST00000576353 UTRNP46939 3433 aa30.34■■■□□ 2.45
SNF8-217ENST00000576353 GOLGB1Q14789 3259 aaKnown RBP30.34■■■□□ 2.45
SNF8-217ENST00000576353 GPTP24298 496 aa30.33■■■□□ 2.45
SNF8-217ENST00000576353 TSPYL6Q8N831 410 aa30.33■■■□□ 2.45
SNF8-217ENST00000576353 PARP10Q53GL7 1025 aa30.32■■■□□ 2.44
SNF8-217ENST00000576353 TTLL6Q8N841 843 aa30.32■■■□□ 2.44
SNF8-217ENST00000576353 ANKRD13DQ6ZTN6 518 aa30.31■■■□□ 2.44
SNF8-217ENST00000576353 PLBD2Q8NHP8 589 aa30.31■■■□□ 2.44
SNF8-217ENST00000576353 FANCIQ9NVI1 1328 aa30.3■■■□□ 2.44
SNF8-217ENST00000576353 GOLGA2Q08379 1002 aa30.3■■■□□ 2.44
SNF8-217ENST00000576353 TWISTNBQ3B726 338 aaPredicted RBP30.3■■■□□ 2.44
SNF8-217ENST00000576353 MYH16Q9H6N6 1097 aa30.3■■■□□ 2.44
SNF8-217ENST00000576353 UBN2Q6ZU65 1347 aa30.29■■■□□ 2.44
SNF8-217ENST00000576353 SUSD4Q5VX71 490 aa30.29■■■□□ 2.44
SNF8-217ENST00000576353 ARHGAP27Q6ZUM4 889 aa30.29■■■□□ 2.44
SNF8-217ENST00000576353 PPP1R42Q7Z4L9 355 aa30.29■■■□□ 2.44
SNF8-217ENST00000576353 ZNF622Q969S3 477 aaKnown RBP eCLIP30.29■■■□□ 2.44
SNF8-217ENST00000576353 IBTKQ9P2D0 1353 aaPredicted RBP30.28■■■□□ 2.44
SNF8-217ENST00000576353 TCIRG1Q13488 830 aa30.28■■■□□ 2.44
SNF8-217ENST00000576353 SRGNP10124 158 aa30.27■■■□□ 2.44
SNF8-217ENST00000576353 KLRG2A4D1S0 409 aaPredicted RBP30.26■■■□□ 2.43
SNF8-217ENST00000576353 STYK1Q6J9G0 422 aa30.26■■■□□ 2.43
SNF8-217ENST00000576353 MASTLQ96GX5 879 aa30.26■■■□□ 2.43
SNF8-217ENST00000576353 STK31Q9BXU1 1019 aa30.26■■■□□ 2.43
SNF8-217ENST00000576353 NUP98P52948 1817 aa30.26■■■□□ 2.43
SNF8-217ENST00000576353 NUTM1Q86Y26 1132 aa30.25■■■□□ 2.43
SNF8-217ENST00000576353 CHD4Q14839 1912 aa30.25■■■□□ 2.43
SNF8-217ENST00000576353 ERFEQ4G0M1 354 aa30.24■■■□□ 2.43
SNF8-217ENST00000576353 CNKSR1Q969H4 720 aa30.24■■■□□ 2.43
SNF8-217ENST00000576353 UTP14AQ9BVJ6 771 aaKnown RBP30.24■■■□□ 2.43
SNF8-217ENST00000576353 PHAXQ9H814 394 aaKnown RBP30.24■■■□□ 2.43
SNF8-217ENST00000576353 SPINK5Q9NQ38 1064 aaPredicted RBP30.24■■■□□ 2.43
SNF8-217ENST00000576353 BRCA1P38398 1863 aaKnown RBP30.24■■■□□ 2.43
SNF8-217ENST00000576353 ZNF521Q96K83 1311 aa30.23■■■□□ 2.43
SNF8-217ENST00000576353 NTSR2O95665 410 aa30.23■■■□□ 2.43
SNF8-217ENST00000576353 NPR1P16066 1061 aa30.22■■■□□ 2.43
SNF8-217ENST00000576353 EXOSC9Q06265 439 aaKnown RBP30.22■■■□□ 2.43
SNF8-217ENST00000576353 RIC3Q7Z5B4 369 aa30.22■■■□□ 2.43
SNF8-217ENST00000576353 NLRP10Q86W26 655 aa30.22■■■□□ 2.43
SNF8-217ENST00000576353 MIER1Q8N108 512 aa30.22■■■□□ 2.43
SNF8-217ENST00000576353 ANKRD31Q8N7Z5 1873 aa30.22■■■□□ 2.43
SNF8-217ENST00000576353 RNF123Q5XPI4 1314 aa30.22■■■□□ 2.43
SNF8-217ENST00000576353 DDX58O95786 925 aaKnown RBP30.21■■■□□ 2.43
SNF8-217ENST00000576353 VAMP4O75379 141 aa30.19■■■□□ 2.42
SNF8-217ENST00000576353 ABCC12Q96J65 1359 aa30.18■■■□□ 2.42
SNF8-217ENST00000576353 ZNF784Q8NCA9 323 aaPredicted RBP30.18■■■□□ 2.42
SNF8-217ENST00000576353 ISCA1Q9BUE6 129 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms