RNA–Protein interactions for RNA: ENST00000576272.5

MPDU1-215, Transcript of mannose-P-dolichol utilization defect 1, human

TSL 2

Gene MPDU1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MPDU1-215	ENST00000576272	SLFN5	Q08AF3	891 aa		10.14	□□□□□ -0.79
MPDU1-215	ENST00000576272	DZIP3	Q86Y13	1208 aa	Known RBP	10.14	□□□□□ -0.79
MPDU1-215	ENST00000576272	C8orf58	Q8NAV2	365 aa		10.14	□□□□□ -0.79
MPDU1-215	ENST00000576272	TSR2	Q969E8	191 aa	Known RBP	10.14	□□□□□ -0.79
MPDU1-215	ENST00000576272	TOGARAM1	Q9Y4F4	1720 aa		10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	SRCAP	Q6ZRS2	3230 aa		10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	ZNF521	Q96K83	1311 aa		10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	DDX58	O95786	925 aa	Known RBP	10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	CHRM1	P11229	460 aa	Predicted RBP	10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	MYL6B	P14649	208 aa		10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	DCAF8	Q5TAQ9	597 aa		10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	NECTIN2	Q92692	538 aa		10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	SETDB2	Q96T68	719 aa		10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	RYDEN	Q9NUL5	291 aa	Known RBP	10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	TBC1D2B	Q9UPU7	963 aa		10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	PARP3	Q9Y6F1	533 aa		10.13	□□□□□ -0.79
MPDU1-215	ENST00000576272	KCP	Q6ZWJ8	1503 aa		10.12	□□□□□ -0.79
MPDU1-215	ENST00000576272	FANCI	Q9NVI1	1328 aa		10.12	□□□□□ -0.79
MPDU1-215	ENST00000576272	STK25	O00506	426 aa		10.12	□□□□□ -0.79
MPDU1-215	ENST00000576272	NPHP1	O15259	732 aa		10.12	□□□□□ -0.79
MPDU1-215	ENST00000576272	GYS1	P13807	737 aa		10.12	□□□□□ -0.79
MPDU1-215	ENST00000576272	EXOSC9	Q06265	439 aa	Known RBP	10.12	□□□□□ -0.79
MPDU1-215	ENST00000576272	USPL1	Q5W0Q7	1092 aa		10.12	□□□□□ -0.79
MPDU1-215	ENST00000576272	COL15A1	P39059	1388 aa		10.12	□□□□□ -0.79
MPDU1-215	ENST00000576272	USP42	Q9H9J4	1324 aa	Known RBP	10.11	□□□□□ -0.79
MPDU1-215	ENST00000576272	NBPF26	B4DH59	902 aa		10.11	□□□□□ -0.79
MPDU1-215	ENST00000576272	VAMP4	O75379	141 aa		10.11	□□□□□ -0.79
MPDU1-215	ENST00000576272	KRT24	Q2M2I5	525 aa		10.11	□□□□□ -0.79
MPDU1-215	ENST00000576272	HSP90AB3P	Q58FF7	597 aa		10.11	□□□□□ -0.79
MPDU1-215	ENST00000576272	NBPF10	Q6P3W6	841 aa	Known RBP	10.11	□□□□□ -0.79
MPDU1-215	ENST00000576272	ANKRD13D	Q6ZTN6	518 aa		10.11	□□□□□ -0.79
MPDU1-215	ENST00000576272	COPS6	Q7L5N1	327 aa		10.11	□□□□□ -0.79
MPDU1-215	ENST00000576272	NBPF15	Q8N660	670 aa		10.11	□□□□□ -0.79
MPDU1-215	ENST00000576272	LY75	O60449	1722 aa		10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	ZBED9	Q6R2W3	1325 aa		10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	ZNF831	Q5JPB2	1677 aa		10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	MMP10	P09238	476 aa		10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	AIMP1	Q12904	312 aa	Known RBP	10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	PDIA6	Q15084	440 aa		10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	TPTE2	Q6XPS3	522 aa		10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	TRMT2A	Q8IZ69	625 aa	Known RBP	10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	TSPYL6	Q8N831	410 aa		10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	CHPF2	Q9P2E5	772 aa		10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	SRP68	Q9UHB9	627 aa	Known RBP	10.1	□□□□□ -0.79
MPDU1-215	ENST00000576272	MAP3K15	Q6ZN16	1313 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	CAMTA2	O94983	1202 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	HSP90B1	P14625	803 aa	Known RBP	10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	GTF2E1	P29083	439 aa	Predicted RBP	10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	TM4SF1	P30408	202 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	PIP4K2A	P48426	406 aa	Predicted RBP	10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	MSL1	Q68DK7	614 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	SMIM5	Q71RC9	77 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	RIC3	Q7Z5B4	369 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	AMIGO3	Q86WK7	504 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	PLBD2	Q8NHP8	589 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	XAGE3	Q8WTP9	111 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	NYX	Q9GZU5	481 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	C4B	P0C0L5	1744 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	RREB1	Q92766	1687 aa		10.09	□□□□□ -0.79
MPDU1-215	ENST00000576272	PTGER2	P43116	358 aa		10.08	□□□□□ -0.8
MPDU1-215	ENST00000576272	NEXN	Q0ZGT2	675 aa		10.08	□□□□□ -0.8
MPDU1-215	ENST00000576272	ALDH1L2	Q3SY69	923 aa		10.08	□□□□□ -0.8
MPDU1-215	ENST00000576272	PARP10	Q53GL7	1025 aa		10.08	□□□□□ -0.8
MPDU1-215	ENST00000576272	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.08	□□□□□ -0.8
MPDU1-215	ENST00000576272	PPP1R42	Q7Z4L9	355 aa		10.08	□□□□□ -0.8
MPDU1-215	ENST00000576272	CDCA7L	Q96GN5	454 aa		10.08	□□□□□ -0.8
MPDU1-215	ENST00000576272	PDZRN3	Q9UPQ7	1066 aa		10.08	□□□□□ -0.8
MPDU1-215	ENST00000576272	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
MPDU1-215	ENST00000576272	CD2AP	Q9Y5K6	639 aa		10.08	□□□□□ -0.8
MPDU1-215	ENST00000576272	DLG5	Q8TDM6	1919 aa		10.07	□□□□□ -0.8
MPDU1-215	ENST00000576272	C5	P01031	1676 aa		10.07	□□□□□ -0.8
MPDU1-215	ENST00000576272	SERPINB2	P05120	415 aa		10.07	□□□□□ -0.8
MPDU1-215	ENST00000576272	BICDL1	Q6ZP65	573 aa		10.07	□□□□□ -0.8
MPDU1-215	ENST00000576272	TTLL7	Q6ZT98	887 aa		10.07	□□□□□ -0.8
MPDU1-215	ENST00000576272	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.07	□□□□□ -0.8
MPDU1-215	ENST00000576272	ZBTB3	Q9H5J0	574 aa		10.07	□□□□□ -0.8
MPDU1-215	ENST00000576272	NUP188	Q5SRE5	1749 aa		10.07	□□□□□ -0.8
MPDU1-215	ENST00000576272	IPO8	O15397	1037 aa	Known RBP	10.06	□□□□□ -0.8
MPDU1-215	ENST00000576272	ANXA1	P04083	346 aa		10.06	□□□□□ -0.8
MPDU1-215	ENST00000576272	TGFB2	P61812	414 aa		10.06	□□□□□ -0.8
MPDU1-215	ENST00000576272	ST5	P78524	1137 aa		10.06	□□□□□ -0.8
MPDU1-215	ENST00000576272	FKBP5	Q13451	457 aa	Predicted RBP	10.06	□□□□□ -0.8
MPDU1-215	ENST00000576272	TCIRG1	Q13488	830 aa		10.06	□□□□□ -0.8
MPDU1-215	ENST00000576272	NFIX	Q14938	502 aa		10.06	□□□□□ -0.8
MPDU1-215	ENST00000576272	PROSER3	Q2NL68	480 aa		10.06	□□□□□ -0.8
MPDU1-215	ENST00000576272	KSR2	Q6VAB6	950 aa		10.06	□□□□□ -0.8
MPDU1-215	ENST00000576272	SIPA1L3	O60292	1781 aa	Predicted RBP	10.06	□□□□□ -0.8
MPDU1-215	ENST00000576272	CARMIL3	Q8ND23	1372 aa		10.05	□□□□□ -0.8
MPDU1-215	ENST00000576272	PAPPA	Q13219	1627 aa		10.05	□□□□□ -0.8
MPDU1-215	ENST00000576272	PDE6B	P35913	854 aa		10.05	□□□□□ -0.8
MPDU1-215	ENST00000576272	FLII	Q13045	1269 aa		10.05	□□□□□ -0.8
MPDU1-215	ENST00000576272	TRIM28	Q13263	835 aa	Known RBP	10.05	□□□□□ -0.8
MPDU1-215	ENST00000576272	HLF	Q16534	295 aa		10.05	□□□□□ -0.8
MPDU1-215	ENST00000576272	TBC1D9B	Q66K14	1250 aa		10.05	□□□□□ -0.8
MPDU1-215	ENST00000576272	LRP10	Q7Z4F1	713 aa		10.05	□□□□□ -0.8
MPDU1-215	ENST00000576272	CNBD1	Q8NA66	436 aa		10.05	□□□□□ -0.8
MPDU1-215	ENST00000576272	FAM212A	Q96EL1	285 aa		10.05	□□□□□ -0.8
MPDU1-215	ENST00000576272	BCL2L12	Q9HB09	334 aa		10.05	□□□□□ -0.8
MPDU1-215	ENST00000576272	DAXX	Q9UER7	740 aa	Predicted RBP	10.05	□□□□□ -0.8

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