RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ADRA2BP18089 450 aa10.25□□□□□ -0.77
CCDC40-215ENST00000576033 CALD1Q05682 793 aaKnown RBP10.25□□□□□ -0.77
CCDC40-215ENST00000576033 AIMP1Q12904 312 aaKnown RBP10.25□□□□□ -0.77
CCDC40-215ENST00000576033 NLGN2Q8NFZ4 835 aa10.25□□□□□ -0.77
CCDC40-215ENST00000576033 TEX13AQ9BXU3 409 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-215ENST00000576033 PHAXQ9H814 394 aaKnown RBP10.25□□□□□ -0.77
CCDC40-215ENST00000576033 NARFQ9UHQ1 456 aa10.25□□□□□ -0.77
CCDC40-215ENST00000576033 C10orf71Q711Q0 1435 aa10.24□□□□□ -0.77
CCDC40-215ENST00000576033 BRCA1P38398 1863 aaKnown RBP10.24□□□□□ -0.77
CCDC40-215ENST00000576033 NFIXQ14938 502 aa10.24□□□□□ -0.77
CCDC40-215ENST00000576033 TWISTNBQ3B726 338 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-215ENST00000576033 G2E3Q7L622 706 aa10.24□□□□□ -0.77
CCDC40-215ENST00000576033 FLAD1Q8NFF5 587 aa10.24□□□□□ -0.77
CCDC40-215ENST00000576033 XAGE3Q8WTP9 111 aa10.24□□□□□ -0.77
CCDC40-215ENST00000576033 FHDC1Q9C0D6 1143 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-215ENST00000576033 PPP1R1BQ9UD71 204 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-215ENST00000576033 LAMB2P55268 1798 aa10.24□□□□□ -0.77
CCDC40-215ENST00000576033 DLEC1Q9Y238 1755 aa10.24□□□□□ -0.77
CCDC40-215ENST00000576033 COL4A1P02462 1669 aa10.23□□□□□ -0.77
CCDC40-215ENST00000576033 FAM177BA6PVY3 158 aa10.23□□□□□ -0.77
CCDC40-215ENST00000576033 POLRMTO00411 1230 aaKnown RBP10.23□□□□□ -0.77
CCDC40-215ENST00000576033 ZPR1O75312 459 aa10.23□□□□□ -0.77
CCDC40-215ENST00000576033 GPTP24298 496 aa10.23□□□□□ -0.77
CCDC40-215ENST00000576033 GOLGA2Q08379 1002 aa10.23□□□□□ -0.77
CCDC40-215ENST00000576033 SLFN5Q08AF3 891 aa10.23□□□□□ -0.77
CCDC40-215ENST00000576033 NCBP3Q53F19 620 aaKnown RBP10.23□□□□□ -0.77
CCDC40-215ENST00000576033 SLC16A10Q8TF71 515 aa10.23□□□□□ -0.77
CCDC40-215ENST00000576033 UBN2Q6ZU65 1347 aa10.23□□□□□ -0.77
CCDC40-215ENST00000576033 PXDNLA1KZ92 1463 aa10.23□□□□□ -0.77
CCDC40-215ENST00000576033 DDX60Q8IY21 1712 aaKnown RBP10.22□□□□□ -0.77
CCDC40-215ENST00000576033 VAMP4O75379 141 aa10.22□□□□□ -0.77
CCDC40-215ENST00000576033 POLD1P28340 1107 aa10.22□□□□□ -0.77
CCDC40-215ENST00000576033 COPS6Q7L5N1 327 aa10.22□□□□□ -0.77
CCDC40-215ENST00000576033 BCL2L13Q9BXK5 485 aa10.22□□□□□ -0.77
CCDC40-215ENST00000576033 DDX21Q9NR30 783 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC40-215ENST00000576033 MAP3K15Q6ZN16 1313 aa10.22□□□□□ -0.77
CCDC40-215ENST00000576033 ABCC12Q96J65 1359 aa10.22□□□□□ -0.77
CCDC40-215ENST00000576033 HOXB7P09629 217 aa10.21□□□□□ -0.77
CCDC40-215ENST00000576033 TM4SF1P30408 202 aa10.21□□□□□ -0.77
CCDC40-215ENST00000576033 SLC51AQ86UW1 340 aa10.21□□□□□ -0.77
CCDC40-215ENST00000576033 A0A087WZG4 1122 aa10.2□□□□□ -0.78
CCDC40-215ENST00000576033 E9PSI1 815 aa10.2□□□□□ -0.78
CCDC40-215ENST00000576033 ADCY9O60503 1353 aa10.2□□□□□ -0.78
CCDC40-215ENST00000576033 ERBB4Q15303 1308 aa10.2□□□□□ -0.78
CCDC40-215ENST00000576033 ZBED9Q6R2W3 1325 aa10.2□□□□□ -0.78
CCDC40-215ENST00000576033 KIF6Q6ZMV9 814 aa10.2□□□□□ -0.78
CCDC40-215ENST00000576033 TRMT2AQ8IZ69 625 aaKnown RBP10.2□□□□□ -0.78
CCDC40-215ENST00000576033 MYH16Q9H6N6 1097 aa10.2□□□□□ -0.78
CCDC40-215ENST00000576033 ATP10DQ9P241 1426 aa10.2□□□□□ -0.78
CCDC40-215ENST00000576033 TAF1P21675 1872 aa10.19□□□□□ -0.78
CCDC40-215ENST00000576033 NUTM1Q86Y26 1132 aa10.19□□□□□ -0.78
CCDC40-215ENST00000576033 SYNE4Q8N205 404 aa10.19□□□□□ -0.78
CCDC40-215ENST00000576033 SYT17Q9BSW7 474 aa10.19□□□□□ -0.78
CCDC40-215ENST00000576033 DBF4Q9UBU7 674 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-215ENST00000576033 NIP7Q9Y221 180 aaKnown RBP eCLIP10.19□□□□□ -0.78
CCDC40-215ENST00000576033 CACNA1FO60840 1977 aa10.18□□□□□ -0.78
CCDC40-215ENST00000576033 ATP5J2-PTCD1G3V325 749 aa10.18□□□□□ -0.78
CCDC40-215ENST00000576033 SERPINB2P05120 415 aa10.18□□□□□ -0.78
CCDC40-215ENST00000576033 CHRNA5P30532 468 aa10.18□□□□□ -0.78
CCDC40-215ENST00000576033 PRR5LQ6MZQ0 368 aa10.18□□□□□ -0.78
CCDC40-215ENST00000576033 NLGN1Q8N2Q7 840 aa10.18□□□□□ -0.78
CCDC40-215ENST00000576033 JARID2Q92833 1246 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-215ENST00000576033 PARP3Q9Y6F1 533 aa10.18□□□□□ -0.78
CCDC40-215ENST00000576033 SPEF2Q9C093 1822 aa10.17□□□□□ -0.78
CCDC40-215ENST00000576033 F6X3S4 739 aa10.17□□□□□ -0.78
CCDC40-215ENST00000576033 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
CCDC40-215ENST00000576033 CCDC30Q5VVM6 783 aa10.17□□□□□ -0.78
CCDC40-215ENST00000576033 SUSD4Q5VX71 490 aa10.17□□□□□ -0.78
CCDC40-215ENST00000576033 C3orf67Q6ZVT6 689 aa10.17□□□□□ -0.78
CCDC40-215ENST00000576033 TNNQ9UQP3 1299 aa10.17□□□□□ -0.78
CCDC40-215ENST00000576033 A0A0G2JLW4 131 aa10.16□□□□□ -0.78
CCDC40-215ENST00000576033 FLIIQ13045 1269 aa10.16□□□□□ -0.78
CCDC40-215ENST00000576033 ERFEQ4G0M1 354 aa10.16□□□□□ -0.78
CCDC40-215ENST00000576033 RTL5Q5HYW3 569 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-215ENST00000576033 GIGYF2Q6Y7W6 1299 aaKnown RBP10.16□□□□□ -0.78
CCDC40-215ENST00000576033 NPM2Q86SE8 214 aaKnown RBP10.16□□□□□ -0.78
CCDC40-215ENST00000576033 ZNF34Q8IZ26 560 aa10.16□□□□□ -0.78
CCDC40-215ENST00000576033 MRPL50Q8N5N7 158 aaKnown RBP10.16□□□□□ -0.78
CCDC40-215ENST00000576033 SSH1Q8WYL5 1049 aa10.16□□□□□ -0.78
CCDC40-215ENST00000576033 SETDB2Q96T68 719 aa10.16□□□□□ -0.78
CCDC40-215ENST00000576033 MYD88Q99836 296 aa10.16□□□□□ -0.78
CCDC40-215ENST00000576033 HYPKQ9NX55 129 aa10.16□□□□□ -0.78
CCDC40-215ENST00000576033 MAP3K2Q9Y2U5 619 aa10.16□□□□□ -0.78
CCDC40-215ENST00000576033 PI4KAP2A4QPH2 592 aa10.15□□□□□ -0.78
CCDC40-215ENST00000576033 ERVV-1B6SEH8 477 aa10.15□□□□□ -0.78
CCDC40-215ENST00000576033 NTSR2O95665 410 aa10.15□□□□□ -0.78
CCDC40-215ENST00000576033 DPEP1P16444 411 aa10.15□□□□□ -0.78
CCDC40-215ENST00000576033 YBX3P16989 372 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCDC40-215ENST00000576033 PELP1Q8IZL8 1130 aaKnown RBP10.15□□□□□ -0.78
CCDC40-215ENST00000576033 PI4KAP1Q8N8J0 262 aa10.15□□□□□ -0.78
CCDC40-215ENST00000576033 CNBD1Q8NA66 436 aa10.15□□□□□ -0.78
CCDC40-215ENST00000576033 PLBD2Q8NHP8 589 aa10.15□□□□□ -0.78
CCDC40-215ENST00000576033 STK31Q9BXU1 1019 aa10.15□□□□□ -0.78
CCDC40-215ENST00000576033 ZNF652Q9Y2D9 606 aa10.15□□□□□ -0.78
CCDC40-215ENST00000576033 GTF3C3Q9Y5Q9 886 aa10.15□□□□□ -0.78
CCDC40-215ENST00000576033 SLX4Q8IY92 1834 aa10.14□□□□□ -0.79
CCDC40-215ENST00000576033 ARFGEF1Q9Y6D6 1849 aa10.14□□□□□ -0.79
CCDC40-215ENST00000576033 IGKV5-2P06315 115 aa10.14□□□□□ -0.79
CCDC40-215ENST00000576033 KCNA3P22001 575 aa10.14□□□□□ -0.79
CCDC40-215ENST00000576033 HMGB2P26583 209 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms