RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 ACTN2P35609 894 aa12.08□□□□□ -0.48
USP6-206ENST00000575709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.08□□□□□ -0.48
USP6-206ENST00000575709 CTAGE15A4D2H0 777 aa12.08□□□□□ -0.48
USP6-206ENST00000575709 CTAGE8P0CG41 777 aa12.08□□□□□ -0.48
USP6-206ENST00000575709 CTAGE4Q8IX94 777 aa12.08□□□□□ -0.48
USP6-206ENST00000575709 FRMD4BQ9Y2L6 1034 aa12.08□□□□□ -0.48
USP6-206ENST00000575709 SURF6O75683 361 aaKnown RBP12.08□□□□□ -0.48
USP6-206ENST00000575709 SH3BGRP55822 239 aaPredicted RBP12.08□□□□□ -0.48
USP6-206ENST00000575709 FERMT1Q9BQL6 677 aa12.08□□□□□ -0.48
USP6-206ENST00000575709 SLU7O95391 586 aaKnown RBP12.08□□□□□ -0.48
USP6-206ENST00000575709 CTAGE9A4FU28 777 aa12.08□□□□□ -0.48
USP6-206ENST00000575709 FAM177BA6PVY3 158 aa12.08□□□□□ -0.48
USP6-206ENST00000575709 KRT13P13646 458 aa12.08□□□□□ -0.48
USP6-206ENST00000575709 SF3B2Q13435 895 aaKnown RBP12.08□□□□□ -0.48
USP6-206ENST00000575709 EVA1CP58658 441 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 POTEDQ86YR6 584 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 EHBP1Q8NDI1 1231 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 RNF10Q8N5U6 811 aaKnown RBP12.07□□□□□ -0.48
USP6-206ENST00000575709 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 FAF1Q9UNN5 650 aaPredicted RBP12.07□□□□□ -0.48
USP6-206ENST00000575709 OPHN1O60890 802 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 ABTB1Q969K4 478 aaPredicted RBP12.07□□□□□ -0.48
USP6-206ENST00000575709 JAKMIP1Q96N16 626 aaKnown RBP12.07□□□□□ -0.48
USP6-206ENST00000575709 AAMPQ13685 434 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 PPP6R1Q9UPN7 881 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 SPECC1L-ADORA2AF8WAN1 911 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 SELENOOQ9BVL4 669 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 CASTP20810 708 aaKnown RBP12.07□□□□□ -0.48
USP6-206ENST00000575709 SIL1Q9H173 461 aa12.07□□□□□ -0.48
USP6-206ENST00000575709 NUTM2DQ5VT03 806 aaPredicted RBP12.06□□□□□ -0.48
USP6-206ENST00000575709 DNAI1Q9UI46 699 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 ISM2Q6H9L7 571 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 GSTA5Q7RTV2 222 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 MTIF2P46199 727 aaKnown RBP12.06□□□□□ -0.48
USP6-206ENST00000575709 BLOC1S2Q6QNY1 142 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 PFDN4Q9NQP4 134 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 INPP1P49441 399 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 ZNF131P52739 623 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 NOLC1Q14978 699 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP6-206ENST00000575709 IFI16Q16666 785 aaKnown RBP12.06□□□□□ -0.48
USP6-206ENST00000575709 RSPH3Q86UC2 560 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 VPS52Q8N1B4 723 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 SPATS2LQ9NUQ6 558 aaKnown RBP12.06□□□□□ -0.48
USP6-206ENST00000575709 TACC3Q9Y6A5 838 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 RNF8O76064 485 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 STX1AQ16623 288 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 HGSO14964 777 aaPredicted RBP12.06□□□□□ -0.48
USP6-206ENST00000575709 LRRC23Q53EV4 343 aaPredicted RBP12.06□□□□□ -0.48
USP6-206ENST00000575709 CAPZA3Q96KX2 299 aa12.06□□□□□ -0.48
USP6-206ENST00000575709 BAG1Q99933 345 aaPredicted RBP12.06□□□□□ -0.48
USP6-206ENST00000575709 ZRANB2O95218 330 aaKnown RBP eCLIP12.05□□□□□ -0.48
USP6-206ENST00000575709 IFT81Q8WYA0 676 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 COG3Q96JB2 828 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 FHAD1B1AJZ9 1412 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 CCDC77Q9BR77 488 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.05□□□□□ -0.48
USP6-206ENST00000575709 BIN1O00499 593 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 TMED1Q13445 227 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 HPDP32754 393 aaPredicted RBP12.05□□□□□ -0.48
USP6-206ENST00000575709 USP5P45974 858 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 MUM1Q2TAK8 710 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 TACO1Q9BSH4 297 aaKnown RBP12.05□□□□□ -0.48
USP6-206ENST00000575709 MX2P20592 715 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 ATP6V1AP38606 617 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 PIP4K2BP78356 416 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 AFAP1L1Q8TED9 768 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 PRKRIP1Q9H875 184 aaPredicted RBP12.05□□□□□ -0.48
USP6-206ENST00000575709 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.05□□□□□ -0.48
USP6-206ENST00000575709 FERMT3Q86UX7 667 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 UBLCP1Q8WVY7 318 aaPredicted RBP12.05□□□□□ -0.48
USP6-206ENST00000575709 MPHOSPH9Q99550 1183 aa12.05□□□□□ -0.48
USP6-206ENST00000575709 MRPL46Q9H2W6 279 aaKnown RBP12.05□□□□□ -0.48
USP6-206ENST00000575709 PUF60Q9UHX1 559 aaKnown RBP12.05□□□□□ -0.48
USP6-206ENST00000575709 ARHGAP35Q9NRY4 1499 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 CNNM3Q8NE01 707 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 LRRC45Q96CN5 670 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 KIF20AO95235 890 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 SDCCAG8Q86SQ7 713 aaPredicted RBP12.04□□□□□ -0.48
USP6-206ENST00000575709 ANKRD24Q8TF21 1146 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 RABEP2Q9H5N1 569 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 RHOXF2BP0C7M4 288 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 HDXQ7Z353 690 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 CCDC25Q86WR0 208 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 MCUR1Q96AQ8 359 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 RHOXF2Q9BQY4 288 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 RAB3GAP2Q9H2M9 1393 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 CTAGE5O15320 804 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 RLBP1P12271 317 aa12.04□□□□□ -0.48
USP6-206ENST00000575709 HSPA1LP34931 641 aa12.03□□□□□ -0.48
USP6-206ENST00000575709 CLCN1P35523 988 aa12.03□□□□□ -0.48
USP6-206ENST00000575709 CWC27Q6UX04 472 aaKnown RBP12.03□□□□□ -0.48
USP6-206ENST00000575709 RB1CC1Q8TDY2 1594 aa12.03□□□□□ -0.48
USP6-206ENST00000575709 SMARCC2Q8TAQ2 1214 aa12.03□□□□□ -0.48
USP6-206ENST00000575709 ATP2A2P16615 1042 aaKnown RBP12.03□□□□□ -0.48
USP6-206ENST00000575709 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
USP6-206ENST00000575709 ALDH3A1P30838 453 aa12.03□□□□□ -0.48
USP6-206ENST00000575709 RGS22Q8NE09 1264 aa12.03□□□□□ -0.48
USP6-206ENST00000575709 WASF1Q92558 559 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms