RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 UBN2Q6ZU65 1347 aa11.39□□□□□ -0.59
SMG6-216ENST00000575176 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
SMG6-216ENST00000575176 TAF1P21675 1872 aa11.39□□□□□ -0.59
SMG6-216ENST00000575176 HLFQ16534 295 aa11.39□□□□□ -0.59
SMG6-216ENST00000575176 TTLL7Q6ZT98 887 aa11.39□□□□□ -0.59
SMG6-216ENST00000575176 DZIP3Q86Y13 1208 aaKnown RBP11.39□□□□□ -0.59
SMG6-216ENST00000575176 WWC1Q8IX03 1113 aa11.39□□□□□ -0.59
SMG6-216ENST00000575176 IFT57Q9NWB7 429 aa11.39□□□□□ -0.59
SMG6-216ENST00000575176 IBTKQ9P2D0 1353 aaPredicted RBP11.39□□□□□ -0.59
SMG6-216ENST00000575176 LTBP1Q14766 1721 aa11.38□□□□□ -0.59
SMG6-216ENST00000575176 A0A087WZG4 1122 aa11.38□□□□□ -0.59
SMG6-216ENST00000575176 ANXA1P04083 346 aa11.38□□□□□ -0.59
SMG6-216ENST00000575176 HOXB7P09629 217 aa11.38□□□□□ -0.59
SMG6-216ENST00000575176 PRR5LQ6MZQ0 368 aa11.38□□□□□ -0.59
SMG6-216ENST00000575176 KLHL34Q8N239 644 aa11.38□□□□□ -0.59
SMG6-216ENST00000575176 SPINK5Q9NQ38 1064 aaPredicted RBP11.38□□□□□ -0.59
SMG6-216ENST00000575176 ZPR1O75312 459 aa11.37□□□□□ -0.59
SMG6-216ENST00000575176 DPEP1P16444 411 aa11.37□□□□□ -0.59
SMG6-216ENST00000575176 MYH3P11055 1940 aa11.37□□□□□ -0.59
SMG6-216ENST00000575176 MAP3K15Q6ZN16 1313 aa11.36□□□□□ -0.59
SMG6-216ENST00000575176 A0A1B0GUL6 1792 aa11.36□□□□□ -0.59
SMG6-216ENST00000575176 SERPINB2P05120 415 aa11.36□□□□□ -0.59
SMG6-216ENST00000575176 TGFB2P61812 414 aa11.36□□□□□ -0.59
SMG6-216ENST00000575176 CLEC4GQ6UXB4 293 aa11.36□□□□□ -0.59
SMG6-216ENST00000575176 C8orf58Q8NAV2 365 aa11.36□□□□□ -0.59
SMG6-216ENST00000575176 PARP3Q9Y6F1 533 aa11.36□□□□□ -0.59
SMG6-216ENST00000575176 IL16Q14005 1332 aa11.35□□□□□ -0.59
SMG6-216ENST00000575176 FANCIQ9NVI1 1328 aa11.35□□□□□ -0.59
SMG6-216ENST00000575176 A0A0G2JLW4 131 aa11.35□□□□□ -0.59
SMG6-216ENST00000575176 CHRNA5P30532 468 aa11.35□□□□□ -0.59
SMG6-216ENST00000575176 TSPYL6Q8N831 410 aa11.35□□□□□ -0.59
SMG6-216ENST00000575176 TSR2Q969E8 191 aaKnown RBP11.35□□□□□ -0.59
SMG6-216ENST00000575176 CHPF2Q9P2E5 772 aa11.35□□□□□ -0.59
SMG6-216ENST00000575176 ZNF330Q9Y3S2 320 aaPredicted RBP11.35□□□□□ -0.59
SMG6-216ENST00000575176 ERVV-1B6SEH8 477 aa11.34□□□□□ -0.59
SMG6-216ENST00000575176 MYL6BP14649 208 aa11.34□□□□□ -0.59
SMG6-216ENST00000575176 GNAI1P63096 354 aa11.34□□□□□ -0.59
SMG6-216ENST00000575176 DUSP27Q5VZP5 1158 aa11.34□□□□□ -0.59
SMG6-216ENST00000575176 DDX21Q9NR30 783 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMG6-216ENST00000575176 DUOX1Q9NRD9 1551 aa11.33□□□□□ -0.6
SMG6-216ENST00000575176 KLRG2A4D1S0 409 aaPredicted RBP11.33□□□□□ -0.6
SMG6-216ENST00000575176 NTSR2O95665 410 aa11.33□□□□□ -0.6
SMG6-216ENST00000575176 PRELPP51888 382 aa11.33□□□□□ -0.6
SMG6-216ENST00000575176 BICDL1Q6ZP65 573 aa11.33□□□□□ -0.6
SMG6-216ENST00000575176 ZNF34Q8IZ26 560 aa11.33□□□□□ -0.6
SMG6-216ENST00000575176 CCDC24Q8N4L8 307 aa11.33□□□□□ -0.6
SMG6-216ENST00000575176 WWC3Q9ULE0 1092 aa11.33□□□□□ -0.6
SMG6-216ENST00000575176 COL4A5P29400 1685 aa11.33□□□□□ -0.6
SMG6-216ENST00000575176 ZNF646O15015 1829 aaPredicted RBP11.32□□□□□ -0.6
SMG6-216ENST00000575176 SPEF2Q9C093 1822 aa11.32□□□□□ -0.6
SMG6-216ENST00000575176 HDGFL1Q5TGJ6 251 aa11.32□□□□□ -0.6
SMG6-216ENST00000575176 GIGYF2Q6Y7W6 1299 aaKnown RBP11.32□□□□□ -0.6
SMG6-216ENST00000575176 SLC51AQ86UW1 340 aa11.32□□□□□ -0.6
SMG6-216ENST00000575176 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
SMG6-216ENST00000575176 ZBTB3Q9H5J0 574 aa11.32□□□□□ -0.6
SMG6-216ENST00000575176 LAS1LQ9Y4W2 734 aaKnown RBP11.32□□□□□ -0.6
SMG6-216ENST00000575176 CCER2I3L3R5 266 aa11.31□□□□□ -0.6
SMG6-216ENST00000575176 EIF2S2P20042 333 aaKnown RBP11.31□□□□□ -0.6
SMG6-216ENST00000575176 XAGE3Q8WTP9 111 aa11.31□□□□□ -0.6
SMG6-216ENST00000575176 CALD1Q05682 793 aaKnown RBP11.3□□□□□ -0.6
SMG6-216ENST00000575176 GPR162Q16538 588 aa11.3□□□□□ -0.6
SMG6-216ENST00000575176 CRY2Q49AN0 593 aa11.3□□□□□ -0.6
SMG6-216ENST00000575176 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
SMG6-216ENST00000575176 COPS6Q7L5N1 327 aa11.3□□□□□ -0.6
SMG6-216ENST00000575176 FAM9BQ8IZU0 186 aa11.3□□□□□ -0.6
SMG6-216ENST00000575176 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
SMG6-216ENST00000575176 BRIP1Q9BX63 1249 aa11.3□□□□□ -0.6
SMG6-216ENST00000575176 NIP7Q9Y221 180 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMG6-216ENST00000575176 SRGNP10124 158 aa11.29□□□□□ -0.6
SMG6-216ENST00000575176 SUSD4Q5VX71 490 aa11.29□□□□□ -0.6
SMG6-216ENST00000575176 WDR63Q8IWG1 891 aa11.29□□□□□ -0.6
SMG6-216ENST00000575176 NGEFQ8N5V2 710 aa11.29□□□□□ -0.6
SMG6-216ENST00000575176 SETDB2Q96T68 719 aa11.29□□□□□ -0.6
SMG6-216ENST00000575176 PHAXQ9H814 394 aaKnown RBP11.29□□□□□ -0.6
SMG6-216ENST00000575176 ZNF652Q9Y2D9 606 aa11.29□□□□□ -0.6
SMG6-216ENST00000575176 NFKBIEO00221 500 aa11.28□□□□□ -0.6
SMG6-216ENST00000575176 KIF6Q6ZMV9 814 aa11.28□□□□□ -0.6
SMG6-216ENST00000575176 ISCA1Q9BUE6 129 aa11.28□□□□□ -0.6
SMG6-216ENST00000575176 DBF4Q9UBU7 674 aaPredicted RBP11.28□□□□□ -0.6
SMG6-216ENST00000575176 CEP350Q5VT06 3117 aa11.28□□□□□ -0.6
SMG6-216ENST00000575176 ELL2O00472 640 aaPredicted RBP11.27□□□□□ -0.61
SMG6-216ENST00000575176 GRIN3BO60391 1043 aa11.27□□□□□ -0.61
SMG6-216ENST00000575176 GPTP24298 496 aa11.27□□□□□ -0.61
SMG6-216ENST00000575176 YY1P25490 414 aa11.27□□□□□ -0.61
SMG6-216ENST00000575176 ERFEQ4G0M1 354 aa11.27□□□□□ -0.61
SMG6-216ENST00000575176 NLRP10Q86W26 655 aa11.27□□□□□ -0.61
SMG6-216ENST00000575176 NBPF5PQ86XG9 351 aaPredicted RBP11.27□□□□□ -0.61
SMG6-216ENST00000575176 NUTM1Q86Y26 1132 aa11.27□□□□□ -0.61
SMG6-216ENST00000575176 C2CD5Q86YS7 1000 aa11.27□□□□□ -0.61
SMG6-216ENST00000575176 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
SMG6-216ENST00000575176 ZNF784Q8NCA9 323 aaPredicted RBP11.27□□□□□ -0.61
SMG6-216ENST00000575176 C7orf43Q8WVR3 580 aa11.27□□□□□ -0.61
SMG6-216ENST00000575176 PIM2Q9P1W9 311 aa11.27□□□□□ -0.61
SMG6-216ENST00000575176 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
SMG6-216ENST00000575176 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
SMG6-216ENST00000575176 PSME4Q14997 1843 aa11.26□□□□□ -0.61
SMG6-216ENST00000575176 VAMP4O75379 141 aa11.26□□□□□ -0.61
SMG6-216ENST00000575176 TWISTNBQ3B726 338 aaPredicted RBP11.26□□□□□ -0.61
SMG6-216ENST00000575176 G2E3Q7L622 706 aa11.26□□□□□ -0.61
SMG6-216ENST00000575176 TRMT2AQ8IZ69 625 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms