RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 GPBP1L1Q9HC44 474 aaPredicted RBP21.59■■□□□ 1.05
TVP23B-207ENST00000574294 NEUROD2Q15784 382 aa21.58■■□□□ 1.05
TVP23B-207ENST00000574294 NBPF5PQ86XG9 351 aaPredicted RBP21.58■■□□□ 1.05
TVP23B-207ENST00000574294 ZNF316A6NFI3 1004 aaPredicted RBP21.57■■□□□ 1.04
TVP23B-207ENST00000574294 TPTE2Q6XPS3 522 aa21.57■■□□□ 1.04
TVP23B-207ENST00000574294 KIF6Q6ZMV9 814 aa21.57■■□□□ 1.04
TVP23B-207ENST00000574294 RRP7AQ9Y3A4 280 aaKnown RBP21.57■■□□□ 1.04
TVP23B-207ENST00000574294 ANKRD31Q8N7Z5 1873 aa21.56■■□□□ 1.04
TVP23B-207ENST00000574294 CHL1O00533 1208 aa21.56■■□□□ 1.04
TVP23B-207ENST00000574294 C1QTNF8P60827 252 aa21.56■■□□□ 1.04
TVP23B-207ENST00000574294 TRIM35Q9UPQ4 493 aa21.56■■□□□ 1.04
TVP23B-207ENST00000574294 NIP7Q9Y221 180 aaKnown RBP eCLIP21.56■■□□□ 1.04
TVP23B-207ENST00000574294 CALD1Q05682 793 aaKnown RBP21.55■■□□□ 1.04
TVP23B-207ENST00000574294 MAP3K15Q6ZN16 1313 aa21.55■■□□□ 1.04
TVP23B-207ENST00000574294 STYK1Q6J9G0 422 aa21.53■■□□□ 1.04
TVP23B-207ENST00000574294 CNKSR1Q969H4 720 aa21.53■■□□□ 1.04
TVP23B-207ENST00000574294 NYXQ9GZU5 481 aa21.53■■□□□ 1.04
TVP23B-207ENST00000574294 NUP98P52948 1817 aa21.52■■□□□ 1.04
TVP23B-207ENST00000574294 HOXB7P09629 217 aa21.52■■□□□ 1.04
TVP23B-207ENST00000574294 MYL6BP14649 208 aa21.52■■□□□ 1.04
TVP23B-207ENST00000574294 ZNF622Q969S3 477 aaKnown RBP eCLIP21.52■■□□□ 1.04
TVP23B-207ENST00000574294 CFAP44Q96MT7 982 aa21.52■■□□□ 1.04
TVP23B-207ENST00000574294 ZC3H4Q9UPT8 1303 aaKnown RBP21.52■■□□□ 1.03
TVP23B-207ENST00000574294 C9orf131Q5VYM1 1079 aa21.51■■□□□ 1.03
TVP23B-207ENST00000574294 NGEFQ8N5V2 710 aa21.51■■□□□ 1.03
TVP23B-207ENST00000574294 MASTLQ96GX5 879 aa21.51■■□□□ 1.03
TVP23B-207ENST00000574294 SBF1O95248 1867 aa21.51■■□□□ 1.03
TVP23B-207ENST00000574294 SRGNP10124 158 aa21.5■■□□□ 1.03
TVP23B-207ENST00000574294 EIF2S2P20042 333 aaKnown RBP21.5■■□□□ 1.03
TVP23B-207ENST00000574294 GTF2E1P29083 439 aaPredicted RBP21.5■■□□□ 1.03
TVP23B-207ENST00000574294 HLFQ16534 295 aa21.5■■□□□ 1.03
TVP23B-207ENST00000574294 SOGA3Q5TF21 947 aa21.5■■□□□ 1.03
TVP23B-207ENST00000574294 IBTKQ9P2D0 1353 aaPredicted RBP21.49■■□□□ 1.03
TVP23B-207ENST00000574294 KLRG2A4D1S0 409 aaPredicted RBP21.49■■□□□ 1.03
TVP23B-207ENST00000574294 ANP32CO43423 234 aa21.49■■□□□ 1.03
TVP23B-207ENST00000574294 LAS1LQ9Y4W2 734 aaKnown RBP21.49■■□□□ 1.03
TVP23B-207ENST00000574294 APAF1O14727 1248 aa21.48■■□□□ 1.03
TVP23B-207ENST00000574294 NPR1P16066 1061 aa21.48■■□□□ 1.03
TVP23B-207ENST00000574294 LMNB1P20700 586 aa21.48■■□□□ 1.03
TVP23B-207ENST00000574294 GIGYF2Q6Y7W6 1299 aaKnown RBP21.48■■□□□ 1.03
TVP23B-207ENST00000574294 TTLL7Q6ZT98 887 aa21.48■■□□□ 1.03
TVP23B-207ENST00000574294 ZNF526Q8TF50 670 aaPredicted RBP21.48■■□□□ 1.03
TVP23B-207ENST00000574294 RNF181Q9P0P0 153 aa21.48■■□□□ 1.03
TVP23B-207ENST00000574294 COL11A2P13942 1736 aaPredicted RBP21.48■■□□□ 1.03
TVP23B-207ENST00000574294 ARFGEF2Q9Y6D5 1785 aa21.47■■□□□ 1.03
TVP23B-207ENST00000574294 PDIA6Q15084 440 aa21.47■■□□□ 1.03
TVP23B-207ENST00000574294 CCDC24Q8N4L8 307 aa21.47■■□□□ 1.03
TVP23B-207ENST00000574294 CHMP4AQ9BY43 222 aa21.47■■□□□ 1.03
TVP23B-207ENST00000574294 GNAI1P63096 354 aa21.46■■□□□ 1.03
TVP23B-207ENST00000574294 PARP10Q53GL7 1025 aa21.46■■□□□ 1.03
TVP23B-207ENST00000574294 LRP10Q7Z4F1 713 aa21.46■■□□□ 1.03
TVP23B-207ENST00000574294 ZBTB3Q9H5J0 574 aa21.46■■□□□ 1.03
TVP23B-207ENST00000574294 DDX21Q9NR30 783 aaKnown RBP eCLIP21.46■■□□□ 1.03
TVP23B-207ENST00000574294 IFT57Q9NWB7 429 aa21.46■■□□□ 1.03
TVP23B-207ENST00000574294 KDM2BQ8NHM5 1336 aa21.46■■□□□ 1.03
TVP23B-207ENST00000574294 HSP90AB3PQ58FF7 597 aa21.45■■□□□ 1.02
TVP23B-207ENST00000574294 ZNF34Q8IZ26 560 aa21.45■■□□□ 1.02
TVP23B-207ENST00000574294 RIC1Q4ADV7 1423 aa21.45■■□□□ 1.02
TVP23B-207ENST00000574294 ZNF853P0CG23 659 aa21.44■■□□□ 1.02
TVP23B-207ENST00000574294 ALDH1B1P30837 517 aa21.44■■□□□ 1.02
TVP23B-207ENST00000574294 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
TVP23B-207ENST00000574294 PRPF40BQ6NWY9 871 aaKnown RBP21.44■■□□□ 1.02
TVP23B-207ENST00000574294 PPP1R42Q7Z4L9 355 aa21.44■■□□□ 1.02
TVP23B-207ENST00000574294 LTBP3Q9NS15 1303 aa21.44■■□□□ 1.02
TVP23B-207ENST00000574294 FAM177BA6PVY3 158 aa21.43■■□□□ 1.02
TVP23B-207ENST00000574294 C21orf2O43822 256 aa21.43■■□□□ 1.02
TVP23B-207ENST00000574294 HDGFL1Q5TGJ6 251 aa21.43■■□□□ 1.02
TVP23B-207ENST00000574294 DBF4Q9UBU7 674 aaPredicted RBP21.43■■□□□ 1.02
TVP23B-207ENST00000574294 RNF123Q5XPI4 1314 aa21.43■■□□□ 1.02
TVP23B-207ENST00000574294 FER1L6Q2WGJ9 1857 aa21.43■■□□□ 1.02
TVP23B-207ENST00000574294 SLX4Q8IY92 1834 aa21.42■■□□□ 1.02
TVP23B-207ENST00000574294 MBIPQ9NS73 344 aa21.42■■□□□ 1.02
TVP23B-207ENST00000574294 CCDC88AQ3V6T2 1871 aa21.41■■□□□ 1.02
TVP23B-207ENST00000574294 NFKBIEO00221 500 aa21.41■■□□□ 1.02
TVP23B-207ENST00000574294 KIF3CO14782 793 aa21.41■■□□□ 1.02
TVP23B-207ENST00000574294 GPTP24298 496 aa21.41■■□□□ 1.02
TVP23B-207ENST00000574294 RASSF7Q02833 373 aa21.41■■□□□ 1.02
TVP23B-207ENST00000574294 CCDC27Q2M243 656 aa21.41■■□□□ 1.02
TVP23B-207ENST00000574294 PROSER3Q2NL68 480 aa21.41■■□□□ 1.02
TVP23B-207ENST00000574294 COPS6Q7L5N1 327 aa21.41■■□□□ 1.02
TVP23B-207ENST00000574294 CACNA1SQ13698 1873 aa21.41■■□□□ 1.02
TVP23B-207ENST00000574294 CRY2Q49AN0 593 aa21.4■■□□□ 1.02
TVP23B-207ENST00000574294 DUSP27Q5VZP5 1158 aa21.4■■□□□ 1.02
TVP23B-207ENST00000574294 XAGE3Q8WTP9 111 aa21.4■■□□□ 1.02
TVP23B-207ENST00000574294 TAOK3Q9H2K8 898 aa21.4■■□□□ 1.02
TVP23B-207ENST00000574294 MRS2Q9HD23 443 aa21.4■■□□□ 1.02
TVP23B-207ENST00000574294 HYPKQ9NX55 129 aa21.4■■□□□ 1.02
TVP23B-207ENST00000574294 UBN2Q6ZU65 1347 aa21.39■■□□□ 1.01
TVP23B-207ENST00000574294 SENP3-EIF4A1A0A087X0R7 540 aa21.39■■□□□ 1.01
TVP23B-207ENST00000574294 KRT24Q2M2I5 525 aa21.39■■□□□ 1.01
TVP23B-207ENST00000574294 NECTIN2Q92692 538 aa21.39■■□□□ 1.01
TVP23B-207ENST00000574294 CHPF2Q9P2E5 772 aa21.39■■□□□ 1.01
TVP23B-207ENST00000574294 DICER1Q9UPY3 1922 aaKnown RBP21.39■■□□□ 1.01
TVP23B-207ENST00000574294 ANKRD36CQ5JPF3 1778 aa21.38■■□□□ 1.01
TVP23B-207ENST00000574294 TOMM70O94826 608 aa21.38■■□□□ 1.01
TVP23B-207ENST00000574294 ANXA1P04083 346 aa21.38■■□□□ 1.01
TVP23B-207ENST00000574294 ERFEQ4G0M1 354 aa21.38■■□□□ 1.01
TVP23B-207ENST00000574294 CCDC93Q567U6 631 aa21.38■■□□□ 1.01
TVP23B-207ENST00000574294 SUSD4Q5VX71 490 aa21.38■■□□□ 1.01
TVP23B-207ENST00000574294 NUTM1Q86Y26 1132 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms