RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 TJAP1Q5JTD0 557 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 EGFLAMQ63HQ2 1017 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 ETFBKMTQ8IXQ9 262 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 ALDH16A1Q8IZ83 802 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 ZNF784Q8NCA9 323 aaPredicted RBP3.02□□□□□ -1.93
CHD3-217ENST00000574022 XAGE2Q96GT9 111 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 HS3ST6Q96QI5 342 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.02□□□□□ -1.93
CHD3-217ENST00000574022 POLR3GLQ9BT43 218 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 CFHR5Q9BXR6 569 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 OSBPL2Q9H1P3 480 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 DNAJC25Q9H1X3 360 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 ZNF232Q9UNY5 417 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 HCN4Q9Y3Q4 1203 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 TBX22Q9Y458 520 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 USP31Q70CQ4 1352 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 EML1O00423 815 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 OPLAHO14841 1288 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 GIPC1O14908 333 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 EIF5BO60841 1220 aaKnown RBP3.01□□□□□ -1.93
CHD3-217ENST00000574022 LILRA1O75019 489 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 CPNE3O75131 537 aaKnown RBP3.01□□□□□ -1.93
CHD3-217ENST00000574022 FSHRP23945 695 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 NOS2P35228 1153 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 GRM5P41594 1212 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 HIRAP54198 1017 aaPredicted RBP3.01□□□□□ -1.93
CHD3-217ENST00000574022 PTPN12Q05209 780 aaKnown RBP3.01□□□□□ -1.93
CHD3-217ENST00000574022 TRIM32Q13049 653 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 ORC1Q13415 861 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 BMS1Q14692 1282 aaKnown RBP3.01□□□□□ -1.93
CHD3-217ENST00000574022 TLR1Q15399 786 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 TAF1CQ15572 869 aaPredicted RBP3.01□□□□□ -1.93
CHD3-217ENST00000574022 RTN1Q16799 776 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.01□□□□□ -1.93
CHD3-217ENST00000574022 ZNF746Q6NUN9 644 aaPredicted RBP3.01□□□□□ -1.93
CHD3-217ENST00000574022 THSD4Q6ZMP0 1018 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 MCF2L2Q86YR7 1114 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 TREML1Q86YW5 311 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 NKX2-3Q8TAU0 364 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 GPR152Q8TDT2 470 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 NUDT16Q96DE0 195 aaKnown RBP3.01□□□□□ -1.93
CHD3-217ENST00000574022 SPACA7Q96KW9 195 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 CDK15Q96Q40 435 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 GGNBP2Q9H3C7 697 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 ARHGEF10LQ9HCE6 1279 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 NEUROD4Q9HD90 331 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 RAB6BQ9NRW1 208 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 FAM13BQ9NYF5 915 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 CABP1Q9NZU7 370 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 KLK14Q9P0G3 267 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 USP3Q9Y6I4 520 aa3.01□□□□□ -1.93
CHD3-217ENST00000574022 POTEB3A0JP26 581 aa3□□□□□ -1.93
CHD3-217ENST00000574022 IL2RAP01589 272 aa3□□□□□ -1.93
CHD3-217ENST00000574022 FGRP09769 529 aa3□□□□□ -1.93
CHD3-217ENST00000574022 ATF4P18848 351 aaPredicted RBP3□□□□□ -1.93
CHD3-217ENST00000574022 IBSPP21815 317 aaPredicted RBP3□□□□□ -1.93
CHD3-217ENST00000574022 ADD1P35611 737 aaKnown RBP3□□□□□ -1.93
CHD3-217ENST00000574022 WNT7BP56706 349 aa3□□□□□ -1.93
CHD3-217ENST00000574022 IGBP1P78318 339 aa3□□□□□ -1.93
CHD3-217ENST00000574022 PAK2Q13177 524 aa3□□□□□ -1.93
CHD3-217ENST00000574022 TCEAL1Q15170 157 aa3□□□□□ -1.93
CHD3-217ENST00000574022 NFE2L2Q16236 605 aa3□□□□□ -1.93
CHD3-217ENST00000574022 PPP1R26Q5T8A7 1209 aaPredicted RBP3□□□□□ -1.93
CHD3-217ENST00000574022 SH3PXD2AQ5TCZ1 1133 aa3□□□□□ -1.93
CHD3-217ENST00000574022 POTEBQ6S5H4 581 aa3□□□□□ -1.93
CHD3-217ENST00000574022 POTEAQ6S8J7 498 aa3□□□□□ -1.93
CHD3-217ENST00000574022 CCDC116Q8IYX3 515 aa3□□□□□ -1.93
CHD3-217ENST00000574022 NLGN1Q8N2Q7 840 aa3□□□□□ -1.93
CHD3-217ENST00000574022 NBPF15Q8N660 670 aa3□□□□□ -1.93
CHD3-217ENST00000574022 EHBP1Q8NDI1 1231 aa3□□□□□ -1.93
CHD3-217ENST00000574022 CNKSR1Q969H4 720 aa3□□□□□ -1.93
CHD3-217ENST00000574022 L3MBTL2Q969R5 705 aa3□□□□□ -1.93
CHD3-217ENST00000574022 OTUD5Q96G74 571 aa3□□□□□ -1.93
CHD3-217ENST00000574022 MRFAP1L1Q96HT8 127 aa3□□□□□ -1.93
CHD3-217ENST00000574022 ESYT1Q9BSJ8 1104 aa3□□□□□ -1.93
CHD3-217ENST00000574022 OSBPL7Q9BZF2 842 aa3□□□□□ -1.93
CHD3-217ENST00000574022 PHACTR1Q9C0D0 580 aa3□□□□□ -1.93
CHD3-217ENST00000574022 C12orf49Q9H741 205 aa3□□□□□ -1.93
CHD3-217ENST00000574022 PGPEP1Q9NXJ5 209 aa3□□□□□ -1.93
CHD3-217ENST00000574022 V9GY48 417 aaPredicted RBP3□□□□□ -1.93
CHD3-217ENST00000574022 ARID4BQ4LE39 1312 aaPredicted RBP2.99□□□□□ -1.93
CHD3-217ENST00000574022 A6NHS1 94 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 PPEF1O14829 653 aaPredicted RBP2.99□□□□□ -1.93
CHD3-217ENST00000574022 MARCH6O60337 910 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 HSD3B2P26439 372 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 GJA8P48165 433 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 ST13P50502 369 aaKnown RBP2.99□□□□□ -1.93
CHD3-217ENST00000574022 SKOR1P84550 965 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 CENPCQ03188 943 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 NR5A1Q13285 461 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 PTPROQ16827 1216 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 MEI1Q5TIA1 1274 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 C1orf53Q5VUE5 145 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 NOL8Q76FK4 1167 aaKnown RBP2.99□□□□□ -1.93
CHD3-217ENST00000574022 CKAP2LQ8IYA6 745 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 EPS8L3Q8TE67 593 aaKnown RBP2.99□□□□□ -1.93
CHD3-217ENST00000574022 ZDHHC1Q8WTX9 485 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 CCDC74AQ96AQ1 378 aa2.99□□□□□ -1.93
CHD3-217ENST00000574022 KCTD12Q96CX2 325 aaKnown RBP2.99□□□□□ -1.93
CHD3-217ENST00000574022 GPRASP2Q96D09 838 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms