RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 SBF1O95248 1867 aa22.92■■□□□ 1.26
SMG6-214ENST00000573827 CHL1O00533 1208 aa22.92■■□□□ 1.26
SMG6-214ENST00000573827 WDR43Q15061 677 aaKnown RBP eCLIP22.92■■□□□ 1.26
SMG6-214ENST00000573827 C9orf131Q5VYM1 1079 aa22.92■■□□□ 1.26
SMG6-214ENST00000573827 TTLL7Q6ZT98 887 aa22.92■■□□□ 1.26
SMG6-214ENST00000573827 TTLL6Q8N841 843 aa22.92■■□□□ 1.26
SMG6-214ENST00000573827 GPBP1L1Q9HC44 474 aaPredicted RBP22.92■■□□□ 1.26
SMG6-214ENST00000573827 ERBB4Q15303 1308 aa22.91■■□□□ 1.26
SMG6-214ENST00000573827 PDE6BP35913 854 aa22.91■■□□□ 1.26
SMG6-214ENST00000573827 ZNF526Q8TF50 670 aaPredicted RBP22.91■■□□□ 1.26
SMG6-214ENST00000573827 PDZRN3Q9UPQ7 1066 aa22.91■■□□□ 1.26
SMG6-214ENST00000573827 ZNF652Q9Y2D9 606 aa22.91■■□□□ 1.26
SMG6-214ENST00000573827 KLRG2A4D1S0 409 aaPredicted RBP22.9■■□□□ 1.26
SMG6-214ENST00000573827 KIF3CO14782 793 aa22.9■■□□□ 1.26
SMG6-214ENST00000573827 MAP3K15Q6ZN16 1313 aa22.89■■□□□ 1.26
SMG6-214ENST00000573827 ERVV-1B6SEH8 477 aa22.89■■□□□ 1.25
SMG6-214ENST00000573827 SRGNP10124 158 aa22.89■■□□□ 1.25
SMG6-214ENST00000573827 NEUROD2Q15784 382 aa22.89■■□□□ 1.25
SMG6-214ENST00000573827 NIP7Q9Y221 180 aaKnown RBP eCLIP22.89■■□□□ 1.25
SMG6-214ENST00000573827 NFKBIEO00221 500 aa22.88■■□□□ 1.25
SMG6-214ENST00000573827 RASSF7Q02833 373 aa22.88■■□□□ 1.25
SMG6-214ENST00000573827 PROSER3Q2NL68 480 aa22.88■■□□□ 1.25
SMG6-214ENST00000573827 CCDC184Q52MB2 194 aa22.88■■□□□ 1.25
SMG6-214ENST00000573827 NBPF5PQ86XG9 351 aaPredicted RBP22.88■■□□□ 1.25
SMG6-214ENST00000573827 NUP98P52948 1817 aa22.87■■□□□ 1.25
SMG6-214ENST00000573827 KRT24Q2M2I5 525 aa22.87■■□□□ 1.25
SMG6-214ENST00000573827 MYL6BP14649 208 aa22.86■■□□□ 1.25
SMG6-214ENST00000573827 ST5P78524 1137 aa22.86■■□□□ 1.25
SMG6-214ENST00000573827 NGEFQ8N5V2 710 aa22.86■■□□□ 1.25
SMG6-214ENST00000573827 SLX4Q8IY92 1834 aa22.86■■□□□ 1.25
SMG6-214ENST00000573827 STYK1Q6J9G0 422 aa22.85■■□□□ 1.25
SMG6-214ENST00000573827 ZNF622Q969S3 477 aaKnown RBP eCLIP22.85■■□□□ 1.25
SMG6-214ENST00000573827 RNF181Q9P0P0 153 aa22.85■■□□□ 1.25
SMG6-214ENST00000573827 UBN2Q6ZU65 1347 aa22.84■■□□□ 1.25
SMG6-214ENST00000573827 ARFGEF2Q9Y6D5 1785 aa22.84■■□□□ 1.25
SMG6-214ENST00000573827 ANXA1P04083 346 aa22.83■■□□□ 1.25
SMG6-214ENST00000573827 ZNF853P0CG23 659 aa22.83■■□□□ 1.25
SMG6-214ENST00000573827 TPTE2Q6XPS3 522 aa22.83■■□□□ 1.25
SMG6-214ENST00000573827 ZNF34Q8IZ26 560 aa22.83■■□□□ 1.25
SMG6-214ENST00000573827 C7orf43Q8WVR3 580 aa22.83■■□□□ 1.25
SMG6-214ENST00000573827 MASTLQ96GX5 879 aa22.83■■□□□ 1.25
SMG6-214ENST00000573827 ABCC12Q96J65 1359 aa22.83■■□□□ 1.25
SMG6-214ENST00000573827 TNRC6CQ9HCJ0 1690 aaKnown RBP22.83■■□□□ 1.24
SMG6-214ENST00000573827 FER1L6Q2WGJ9 1857 aa22.83■■□□□ 1.24
SMG6-214ENST00000573827 IBTKQ9P2D0 1353 aaPredicted RBP22.82■■□□□ 1.24
SMG6-214ENST00000573827 APAF1O14727 1248 aa22.82■■□□□ 1.24
SMG6-214ENST00000573827 EIF2S2P20042 333 aaKnown RBP22.82■■□□□ 1.24
SMG6-214ENST00000573827 ZBTB3Q9H5J0 574 aa22.82■■□□□ 1.24
SMG6-214ENST00000573827 NMRK2Q9NPI5 230 aa22.82■■□□□ 1.24
SMG6-214ENST00000573827 C21orf2O43822 256 aa22.81■■□□□ 1.24
SMG6-214ENST00000573827 LMNB1P20700 586 aa22.81■■□□□ 1.24
SMG6-214ENST00000573827 PRPF40BQ6NWY9 871 aaKnown RBP22.81■■□□□ 1.24
SMG6-214ENST00000573827 GIGYF2Q6Y7W6 1299 aaKnown RBP22.81■■□□□ 1.24
SMG6-214ENST00000573827 KIF6Q6ZMV9 814 aa22.81■■□□□ 1.24
SMG6-214ENST00000573827 CNKSR1Q969H4 720 aa22.81■■□□□ 1.24
SMG6-214ENST00000573827 CFAP44Q96MT7 982 aa22.81■■□□□ 1.24
SMG6-214ENST00000573827 RIC1Q4ADV7 1423 aa22.8■■□□□ 1.24
SMG6-214ENST00000573827 ZC3H4Q9UPT8 1303 aaKnown RBP22.8■■□□□ 1.24
SMG6-214ENST00000573827 ZNF316A6NFI3 1004 aaPredicted RBP22.79■■□□□ 1.24
SMG6-214ENST00000573827 FAM177BA6PVY3 158 aa22.79■■□□□ 1.24
SMG6-214ENST00000573827 CRY2Q49AN0 593 aa22.79■■□□□ 1.24
SMG6-214ENST00000573827 LTBP3Q9NS15 1303 aa22.79■■□□□ 1.24
SMG6-214ENST00000573827 SENP3-EIF4A1A0A087X0R7 540 aa22.78■■□□□ 1.24
SMG6-214ENST00000573827 NPHP1O15259 732 aa22.78■■□□□ 1.24
SMG6-214ENST00000573827 NPR1P16066 1061 aa22.78■■□□□ 1.24
SMG6-214ENST00000573827 GPTP24298 496 aa22.78■■□□□ 1.24
SMG6-214ENST00000573827 SUSD4Q5VX71 490 aa22.78■■□□□ 1.24
SMG6-214ENST00000573827 NUTM1Q86Y26 1132 aa22.78■■□□□ 1.24
SMG6-214ENST00000573827 MBIPQ9NS73 344 aa22.78■■□□□ 1.24
SMG6-214ENST00000573827 NTSR2O95665 410 aa22.77■■□□□ 1.24
SMG6-214ENST00000573827 HOXB7P09629 217 aa22.77■■□□□ 1.24
SMG6-214ENST00000573827 ERFEQ4G0M1 354 aa22.77■■□□□ 1.24
SMG6-214ENST00000573827 DDX21Q9NR30 783 aaKnown RBP eCLIP22.77■■□□□ 1.24
SMG6-214ENST00000573827 ZNF219Q9P2Y4 722 aaPredicted RBP22.77■■□□□ 1.24
SMG6-214ENST00000573827 CCDC88AQ3V6T2 1871 aa22.77■■□□□ 1.24
SMG6-214ENST00000573827 SNED1Q8TER0 1413 aa22.76■■□□□ 1.23
SMG6-214ENST00000573827 NECTIN2Q92692 538 aa22.76■■□□□ 1.23
SMG6-214ENST00000573827 LAS1LQ9Y4W2 734 aaKnown RBP22.76■■□□□ 1.23
SMG6-214ENST00000573827 CACNA1SQ13698 1873 aa22.76■■□□□ 1.23
SMG6-214ENST00000573827 COPS6Q7L5N1 327 aa22.75■■□□□ 1.23
SMG6-214ENST00000573827 XAGE3Q8WTP9 111 aa22.75■■□□□ 1.23
SMG6-214ENST00000573827 NYXQ9GZU5 481 aa22.75■■□□□ 1.23
SMG6-214ENST00000573827 TIAM2Q8IVF5 1701 aa22.74■■□□□ 1.23
SMG6-214ENST00000573827 C3orf67Q6ZVT6 689 aa22.74■■□□□ 1.23
SMG6-214ENST00000573827 IFT57Q9NWB7 429 aa22.74■■□□□ 1.23
SMG6-214ENST00000573827 CHPF2Q9P2E5 772 aa22.74■■□□□ 1.23
SMG6-214ENST00000573827 DICER1Q9UPY3 1922 aaKnown RBP22.73■■□□□ 1.23
SMG6-214ENST00000573827 OLFM4Q6UX06 510 aa22.73■■□□□ 1.23
SMG6-214ENST00000573827 TOMM70O94826 608 aa22.72■■□□□ 1.23
SMG6-214ENST00000573827 HOXA10P31260 410 aaPredicted RBP22.72■■□□□ 1.23
SMG6-214ENST00000573827 PARP10Q53GL7 1025 aa22.72■■□□□ 1.23
SMG6-214ENST00000573827 HDGFL1Q5TGJ6 251 aa22.72■■□□□ 1.23
SMG6-214ENST00000573827 DUSP27Q5VZP5 1158 aa22.72■■□□□ 1.23
SMG6-214ENST00000573827 TAOK3Q9H2K8 898 aa22.72■■□□□ 1.23
SMG6-214ENST00000573827 KDM2BQ8NHM5 1336 aa22.72■■□□□ 1.23
SMG6-214ENST00000573827 GLTPD2A6NH11 291 aa22.71■■□□□ 1.23
SMG6-214ENST00000573827 ANKRD36CQ5JPF3 1778 aa22.71■■□□□ 1.23
SMG6-214ENST00000573827 GTF2E1P29083 439 aaPredicted RBP22.7■■□□□ 1.22
SMG6-214ENST00000573827 SLC10A5Q5PT55 438 aa22.7■■□□□ 1.22
SMG6-214ENST00000573827 SOGA3Q5TF21 947 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms