RNA–Protein interactions for RNA: ENST00000573395.1

RAB40B-208, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-208ENST00000573395 KIF6Q6ZMV9 814 aa21.37■■□□□ 1.01
RAB40B-208ENST00000573395 BCORQ6W2J9 1755 aa21.37■■□□□ 1.01
RAB40B-208ENST00000573395 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
RAB40B-208ENST00000573395 FAM177BA6PVY3 158 aa21.36■■□□□ 1.01
RAB40B-208ENST00000573395 MYL6BP14649 208 aa21.36■■□□□ 1.01
RAB40B-208ENST00000573395 GTF2E1P29083 439 aaPredicted RBP21.36■■□□□ 1.01
RAB40B-208ENST00000573395 RASSF7Q02833 373 aa21.36■■□□□ 1.01
RAB40B-208ENST00000573395 TPTE2Q6XPS3 522 aa21.36■■□□□ 1.01
RAB40B-208ENST00000573395 RUNDC1Q96C34 613 aa21.36■■□□□ 1.01
RAB40B-208ENST00000573395 ZNF219Q9P2Y4 722 aaPredicted RBP21.36■■□□□ 1.01
RAB40B-208ENST00000573395 LAMB4A4D0S4 1761 aa21.36■■□□□ 1.01
RAB40B-208ENST00000573395 KDM2BQ8NHM5 1336 aa21.35■■□□□ 1.01
RAB40B-208ENST00000573395 CNKSR1Q969H4 720 aa21.35■■□□□ 1.01
RAB40B-208ENST00000573395 PRKRIP1Q9H875 184 aaPredicted RBP21.35■■□□□ 1.01
RAB40B-208ENST00000573395 DLEC1Q9Y238 1755 aa21.34■■□□□ 1.01
RAB40B-208ENST00000573395 KIF3CO14782 793 aa21.34■■□□□ 1.01
RAB40B-208ENST00000573395 LMNB1P20700 586 aa21.34■■□□□ 1.01
RAB40B-208ENST00000573395 ZEB1P37275 1124 aaPredicted RBP21.34■■□□□ 1.01
RAB40B-208ENST00000573395 BABAM1Q9NWV8 329 aa21.34■■□□□ 1.01
RAB40B-208ENST00000573395 C21orf2O43822 256 aa21.33■■□□□ 1.01
RAB40B-208ENST00000573395 HLFQ16534 295 aa21.33■■□□□ 1.01
RAB40B-208ENST00000573395 STYK1Q6J9G0 422 aa21.33■■□□□ 1.01
RAB40B-208ENST00000573395 C16orf71Q8IYS4 520 aaPredicted RBP21.33■■□□□ 1.01
RAB40B-208ENST00000573395 MASTLQ96GX5 879 aa21.33■■□□□ 1.01
RAB40B-208ENST00000573395 NMRK2Q9NPI5 230 aa21.33■■□□□ 1.01
RAB40B-208ENST00000573395 ERVV-1B6SEH8 477 aa21.32■■□□□ 1
RAB40B-208ENST00000573395 EIF2S2P20042 333 aaKnown RBP21.32■■□□□ 1
RAB40B-208ENST00000573395 ADAMTS8Q9UP79 889 aa21.32■■□□□ 1
RAB40B-208ENST00000573395 LAS1LQ9Y4W2 734 aaKnown RBP21.32■■□□□ 1
RAB40B-208ENST00000573395 ERBB4Q15303 1308 aa21.31■■□□□ 1
RAB40B-208ENST00000573395 MAP3K15Q6ZN16 1313 aa21.31■■□□□ 1
RAB40B-208ENST00000573395 ANKRD31Q8N7Z5 1873 aa21.31■■□□□ 1
RAB40B-208ENST00000573395 SRGNP10124 158 aa21.31■■□□□ 1
RAB40B-208ENST00000573395 TTLL7Q6ZT98 887 aa21.3■■□□□ 1
RAB40B-208ENST00000573395 NYXQ9GZU5 481 aa21.3■■□□□ 1
RAB40B-208ENST00000573395 ZBTB3Q9H5J0 574 aa21.3■■□□□ 1
RAB40B-208ENST00000573395 ZC3H4Q9UPT8 1303 aaKnown RBP21.29■■□□□ 1
RAB40B-208ENST00000573395 TOMM70O94826 608 aa21.29■■□□□ 1
RAB40B-208ENST00000573395 NPR1P16066 1061 aa21.29■■□□□ 1
RAB40B-208ENST00000573395 SOGA3Q5TF21 947 aa21.29■■□□□ 1
RAB40B-208ENST00000573395 PRPF40BQ6NWY9 871 aaKnown RBP21.29■■□□□ 1
RAB40B-208ENST00000573395 NFKBIEO00221 500 aa21.28■■□□□ 1
RAB40B-208ENST00000573395 HSPA6P17066 643 aa21.28■■□□□ 1
RAB40B-208ENST00000573395 COL11A2P13942 1736 aaPredicted RBP21.27■■□□□ 1
RAB40B-208ENST00000573395 GPTP24298 496 aa21.27■■□□□ 1
RAB40B-208ENST00000573395 NECTIN2Q92692 538 aa21.26■□□□□ 0.99
RAB40B-208ENST00000573395 TAOK3Q9H2K8 898 aa21.26■□□□□ 0.99
RAB40B-208ENST00000573395 RRAGCQ9HB90 399 aa21.26■□□□□ 0.99
RAB40B-208ENST00000573395 TRIM35Q9UPQ4 493 aa21.25■□□□□ 0.99
RAB40B-208ENST00000573395 CHL1O00533 1208 aa21.24■□□□□ 0.99
RAB40B-208ENST00000573395 ERFEQ4G0M1 354 aa21.24■□□□□ 0.99
RAB40B-208ENST00000573395 DPY19L2Q6NUT2 758 aa21.24■□□□□ 0.99
RAB40B-208ENST00000573395 GIGYF2Q6Y7W6 1299 aaKnown RBP21.24■□□□□ 0.99
RAB40B-208ENST00000573395 NUTM1Q86Y26 1132 aa21.24■□□□□ 0.99
RAB40B-208ENST00000573395 SBF1O95248 1867 aa21.24■□□□□ 0.99
RAB40B-208ENST00000573395 KLRG2A4D1S0 409 aaPredicted RBP21.23■□□□□ 0.99
RAB40B-208ENST00000573395 ALDH1B1P30837 517 aa21.23■□□□□ 0.99
RAB40B-208ENST00000573395 PRELPP51888 382 aa21.23■□□□□ 0.99
RAB40B-208ENST00000573395 CCDC93Q567U6 631 aa21.23■□□□□ 0.99
RAB40B-208ENST00000573395 GLTPD2A6NH11 291 aa21.22■□□□□ 0.99
RAB40B-208ENST00000573395 ANXA1P04083 346 aa21.22■□□□□ 0.99
RAB40B-208ENST00000573395 AIMP1Q12904 312 aaKnown RBP21.22■□□□□ 0.99
RAB40B-208ENST00000573395 PPP1R42Q7Z4L9 355 aa21.22■□□□□ 0.99
RAB40B-208ENST00000573395 LTBP3Q9NS15 1303 aa21.22■□□□□ 0.99
RAB40B-208ENST00000573395 PDIA6Q15084 440 aa21.21■□□□□ 0.99
RAB40B-208ENST00000573395 PARP10Q53GL7 1025 aa21.21■□□□□ 0.99
RAB40B-208ENST00000573395 RBM46Q8TBY0 533 aaKnown RBP21.21■□□□□ 0.99
RAB40B-208ENST00000573395 RPGRQ92834 1020 aaKnown RBP21.21■□□□□ 0.99
RAB40B-208ENST00000573395 APAF1O14727 1248 aa21.2■□□□□ 0.98
RAB40B-208ENST00000573395 CALD1Q05682 793 aaKnown RBP21.2■□□□□ 0.98
RAB40B-208ENST00000573395 KRT24Q2M2I5 525 aa21.2■□□□□ 0.98
RAB40B-208ENST00000573395 PROSER3Q2NL68 480 aa21.2■□□□□ 0.98
RAB40B-208ENST00000573395 SUSD4Q5VX71 490 aa21.2■□□□□ 0.98
RAB40B-208ENST00000573395 ZNF34Q8IZ26 560 aa21.2■□□□□ 0.98
RAB40B-208ENST00000573395 UBN2Q6ZU65 1347 aa21.2■□□□□ 0.98
RAB40B-208ENST00000573395 IBTKQ9P2D0 1353 aaPredicted RBP21.2■□□□□ 0.98
RAB40B-208ENST00000573395 SLX4Q8IY92 1834 aa21.2■□□□□ 0.98
RAB40B-208ENST00000573395 VEGFAP15692 232 aaPredicted RBP21.19■□□□□ 0.98
RAB40B-208ENST00000573395 HSP90AB3PQ58FF7 597 aa21.19■□□□□ 0.98
RAB40B-208ENST00000573395 HDGFL1Q5TGJ6 251 aa21.19■□□□□ 0.98
RAB40B-208ENST00000573395 COPS6Q7L5N1 327 aa21.19■□□□□ 0.98
RAB40B-208ENST00000573395 XAGE3Q8WTP9 111 aa21.19■□□□□ 0.98
RAB40B-208ENST00000573395 CFAP44Q96MT7 982 aa21.19■□□□□ 0.98
RAB40B-208ENST00000573395 DDX21Q9NR30 783 aaKnown RBP eCLIP21.19■□□□□ 0.98
RAB40B-208ENST00000573395 ABCC12Q96J65 1359 aa21.19■□□□□ 0.98
RAB40B-208ENST00000573395 NUP98P52948 1817 aa21.18■□□□□ 0.98
RAB40B-208ENST00000573395 CACNA1SQ13698 1873 aa21.18■□□□□ 0.98
RAB40B-208ENST00000573395 APLP1P51693 650 aa21.18■□□□□ 0.98
RAB40B-208ENST00000573395 RTKN2Q8IZC4 609 aa21.18■□□□□ 0.98
RAB40B-208ENST00000573395 TNRC6CQ9HCJ0 1690 aaKnown RBP21.18■□□□□ 0.98
RAB40B-208ENST00000573395 HOXB7P09629 217 aa21.17■□□□□ 0.98
RAB40B-208ENST00000573395 FSTL1Q12841 308 aa21.17■□□□□ 0.98
RAB40B-208ENST00000573395 LRP10Q7Z4F1 713 aa21.17■□□□□ 0.98
RAB40B-208ENST00000573395 C7orf43Q8WVR3 580 aa21.17■□□□□ 0.98
RAB40B-208ENST00000573395 UTP14AQ9BVJ6 771 aaKnown RBP21.17■□□□□ 0.98
RAB40B-208ENST00000573395 TIAM2Q8IVF5 1701 aa21.17■□□□□ 0.98
RAB40B-208ENST00000573395 ARFGEF2Q9Y6D5 1785 aa21.16■□□□□ 0.98
RAB40B-208ENST00000573395 NTSR2O95665 410 aa21.16■□□□□ 0.98
RAB40B-208ENST00000573395 FKBP4Q02790 459 aaKnown RBP eCLIP21.16■□□□□ 0.98
RAB40B-208ENST00000573395 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms