RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 IFT57Q9NWB7 429 aa26.23■■□□□ 1.79
NUP88-204ENST00000572290 NIP7Q9Y221 180 aaKnown RBP eCLIP26.23■■□□□ 1.79
NUP88-204ENST00000572290 NRXN2Q9P2S2 1712 aa26.22■■□□□ 1.79
NUP88-204ENST00000572290 MAP3K15Q6ZN16 1313 aa26.22■■□□□ 1.79
NUP88-204ENST00000572290 GNAI1P63096 354 aa26.22■■□□□ 1.79
NUP88-204ENST00000572290 PDIA6Q15084 440 aa26.22■■□□□ 1.79
NUP88-204ENST00000572290 C2CD5Q86YS7 1000 aa26.22■■□□□ 1.79
NUP88-204ENST00000572290 CCDC24Q8N4L8 307 aa26.22■■□□□ 1.79
NUP88-204ENST00000572290 BRIP1Q9BX63 1249 aa26.22■■□□□ 1.79
NUP88-204ENST00000572290 ST5P78524 1137 aa26.21■■□□□ 1.79
NUP88-204ENST00000572290 NBPF5PQ86XG9 351 aaPredicted RBP26.21■■□□□ 1.79
NUP88-204ENST00000572290 ZNF784Q8NCA9 323 aaPredicted RBP26.21■■□□□ 1.79
NUP88-204ENST00000572290 NECTIN2Q92692 538 aa26.21■■□□□ 1.79
NUP88-204ENST00000572290 N4BP2Q86UW6 1770 aaPredicted RBP26.2■■□□□ 1.79
NUP88-204ENST00000572290 H0YIN7 160 aa26.2■■□□□ 1.78
NUP88-204ENST00000572290 HOXB7P09629 217 aa26.2■■□□□ 1.78
NUP88-204ENST00000572290 PDE6BP35913 854 aa26.2■■□□□ 1.78
NUP88-204ENST00000572290 PDZRN3Q9UPQ7 1066 aa26.2■■□□□ 1.78
NUP88-204ENST00000572290 BCORQ6W2J9 1755 aa26.2■■□□□ 1.78
NUP88-204ENST00000572290 ANXA1P04083 346 aa26.19■■□□□ 1.78
NUP88-204ENST00000572290 CCDC27Q2M243 656 aa26.19■■□□□ 1.78
NUP88-204ENST00000572290 PROSER3Q2NL68 480 aa26.19■■□□□ 1.78
NUP88-204ENST00000572290 LRP10Q7Z4F1 713 aa26.19■■□□□ 1.78
NUP88-204ENST00000572290 ZBTB3Q9H5J0 574 aa26.19■■□□□ 1.78
NUP88-204ENST00000572290 SENP3-EIF4A1A0A087X0R7 540 aa26.18■■□□□ 1.78
NUP88-204ENST00000572290 ARHGAP27Q6ZUM4 889 aa26.18■■□□□ 1.78
NUP88-204ENST00000572290 HDGFL1Q5TGJ6 251 aa26.17■■□□□ 1.78
NUP88-204ENST00000572290 TPTE2Q6XPS3 522 aa26.17■■□□□ 1.78
NUP88-204ENST00000572290 DDX21Q9NR30 783 aaKnown RBP eCLIP26.17■■□□□ 1.78
NUP88-204ENST00000572290 AFDNP55196 1824 aaKnown RBP26.16■■□□□ 1.78
NUP88-204ENST00000572290 FAM177BA6PVY3 158 aa26.16■■□□□ 1.78
NUP88-204ENST00000572290 NCBP3Q53F19 620 aaKnown RBP26.16■■□□□ 1.78
NUP88-204ENST00000572290 DUSP27Q5VZP5 1158 aa26.16■■□□□ 1.78
NUP88-204ENST00000572290 WWC1Q8IX03 1113 aa26.15■■□□□ 1.78
NUP88-204ENST00000572290 TTLL6Q8N841 843 aa26.15■■□□□ 1.78
NUP88-204ENST00000572290 GIGYF2Q6Y7W6 1299 aaKnown RBP26.14■■□□□ 1.78
NUP88-204ENST00000572290 COPS6Q7L5N1 327 aa26.14■■□□□ 1.78
NUP88-204ENST00000572290 FAM9BQ8IZU0 186 aa26.14■■□□□ 1.78
NUP88-204ENST00000572290 CHPF2Q9P2E5 772 aa26.14■■□□□ 1.78
NUP88-204ENST00000572290 ATP10DQ9P241 1426 aa26.14■■□□□ 1.77
NUP88-204ENST00000572290 XAGE3Q8WTP9 111 aa26.13■■□□□ 1.77
NUP88-204ENST00000572290 ZNF622Q969S3 477 aaKnown RBP eCLIP26.13■■□□□ 1.77
NUP88-204ENST00000572290 CHD4Q14839 1912 aa26.12■■□□□ 1.77
NUP88-204ENST00000572290 GPTP24298 496 aa26.12■■□□□ 1.77
NUP88-204ENST00000572290 GTF2E1P29083 439 aaPredicted RBP26.12■■□□□ 1.77
NUP88-204ENST00000572290 AIMP1Q12904 312 aaKnown RBP26.12■■□□□ 1.77
NUP88-204ENST00000572290 NYXQ9GZU5 481 aa26.12■■□□□ 1.77
NUP88-204ENST00000572290 DBF4Q9UBU7 674 aaPredicted RBP26.12■■□□□ 1.77
NUP88-204ENST00000572290 ZNF34Q8IZ26 560 aa26.11■■□□□ 1.77
NUP88-204ENST00000572290 ELL2O00472 640 aaPredicted RBP26.1■■□□□ 1.77
NUP88-204ENST00000572290 SRGNP10124 158 aa26.09■■□□□ 1.77
NUP88-204ENST00000572290 SALL2Q9Y467 1007 aaPredicted RBP26.09■■□□□ 1.77
NUP88-204ENST00000572290 UBN2Q6ZU65 1347 aa26.09■■□□□ 1.77
NUP88-204ENST00000572290 ADCY9O60503 1353 aa26.08■■□□□ 1.77
NUP88-204ENST00000572290 STYK1Q6J9G0 422 aa26.08■■□□□ 1.77
NUP88-204ENST00000572290 C8orf58Q8NAV2 365 aa26.08■■□□□ 1.77
NUP88-204ENST00000572290 MASTLQ96GX5 879 aa26.08■■□□□ 1.77
NUP88-204ENST00000572290 BRCA1P38398 1863 aaKnown RBP26.08■■□□□ 1.77
NUP88-204ENST00000572290 IL16Q14005 1332 aa26.08■■□□□ 1.77
NUP88-204ENST00000572290 KLRG2A4D1S0 409 aaPredicted RBP26.07■■□□□ 1.76
NUP88-204ENST00000572290 PARP10Q53GL7 1025 aa26.07■■□□□ 1.76
NUP88-204ENST00000572290 HSP90AB3PQ58FF7 597 aa26.07■■□□□ 1.76
NUP88-204ENST00000572290 SUSD4Q5VX71 490 aa26.07■■□□□ 1.76
NUP88-204ENST00000572290 TSR2Q969E8 191 aaKnown RBP26.07■■□□□ 1.76
NUP88-204ENST00000572290 CNKSR1Q969H4 720 aa26.07■■□□□ 1.76
NUP88-204ENST00000572290 HYPKQ9NX55 129 aa26.07■■□□□ 1.76
NUP88-204ENST00000572290 NUTM1Q86Y26 1132 aa26.06■■□□□ 1.76
NUP88-204ENST00000572290 IBTKQ9P2D0 1353 aaPredicted RBP26.06■■□□□ 1.76
NUP88-204ENST00000572290 ERFEQ4G0M1 354 aa26.05■■□□□ 1.76
NUP88-204ENST00000572290 PPP1R42Q7Z4L9 355 aa26.05■■□□□ 1.76
NUP88-204ENST00000572290 CHMP4AQ9BY43 222 aa26.05■■□□□ 1.76
NUP88-204ENST00000572290 NPR1P16066 1061 aa26.04■■□□□ 1.76
NUP88-204ENST00000572290 ANKRD31Q8N7Z5 1873 aa26.04■■□□□ 1.76
NUP88-204ENST00000572290 NTSR2O95665 410 aa26.03■■□□□ 1.76
NUP88-204ENST00000572290 TCIRG1Q13488 830 aa26.03■■□□□ 1.76
NUP88-204ENST00000572290 C9orf131Q5VYM1 1079 aa26.03■■□□□ 1.76
NUP88-204ENST00000572290 ANKRD13DQ6ZTN6 518 aa26.03■■□□□ 1.76
NUP88-204ENST00000572290 WDR63Q8IWG1 891 aa26.03■■□□□ 1.76
NUP88-204ENST00000572290 TSPYL6Q8N831 410 aa26.03■■□□□ 1.76
NUP88-204ENST00000572290 PLBD2Q8NHP8 589 aa26.03■■□□□ 1.76
NUP88-204ENST00000572290 ABCC12Q96J65 1359 aa26.03■■□□□ 1.76
NUP88-204ENST00000572290 C21orf2O43822 256 aa26.02■■□□□ 1.76
NUP88-204ENST00000572290 ZNF219Q9P2Y4 722 aaPredicted RBP26.02■■□□□ 1.76
NUP88-204ENST00000572290 CCDC30Q5VVM6 783 aa26.01■■□□□ 1.75
NUP88-204ENST00000572290 PRPF40BQ6NWY9 871 aaKnown RBP26.01■■□□□ 1.75
NUP88-204ENST00000572290 UTP14AQ9BVJ6 771 aaKnown RBP26.01■■□□□ 1.75
NUP88-204ENST00000572290 ARFGEF1Q9Y6D6 1849 aa26■■□□□ 1.75
NUP88-204ENST00000572290 DLEC1Q9Y238 1755 aa26■■□□□ 1.75
NUP88-204ENST00000572290 RASSF7Q02833 373 aa26■■□□□ 1.75
NUP88-204ENST00000572290 ZNF526Q8TF50 670 aaPredicted RBP26■■□□□ 1.75
NUP88-204ENST00000572290 RNF181Q9P0P0 153 aa26■■□□□ 1.75
NUP88-204ENST00000572290 NLRP10Q86W26 655 aa25.99■■□□□ 1.75
NUP88-204ENST00000572290 GPBP1L1Q9HC44 474 aaPredicted RBP25.99■■□□□ 1.75
NUP88-204ENST00000572290 COL11A2P13942 1736 aaPredicted RBP25.99■■□□□ 1.75
NUP88-204ENST00000572290 RIC1Q4ADV7 1423 aa25.98■■□□□ 1.75
NUP88-204ENST00000572290 CRY2Q49AN0 593 aa25.98■■□□□ 1.75
NUP88-204ENST00000572290 PHAXQ9H814 394 aaKnown RBP25.98■■□□□ 1.75
NUP88-204ENST00000572290 RNF123Q5XPI4 1314 aa25.97■■□□□ 1.75
NUP88-204ENST00000572290 FANCIQ9NVI1 1328 aa25.97■■□□□ 1.75
NUP88-204ENST00000572290 NFKBIEO00221 500 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms