RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 KRT24Q2M2I5 525 aa11.46□□□□□ -0.57
SMG6-210ENST00000572205 USPL1Q5W0Q7 1092 aa11.46□□□□□ -0.57
SMG6-210ENST00000572205 PNNQ9H307 717 aaKnown RBP11.46□□□□□ -0.57
SMG6-210ENST00000572205 FER1L6Q2WGJ9 1857 aa11.45□□□□□ -0.58
SMG6-210ENST00000572205 APAF1O14727 1248 aa11.45□□□□□ -0.58
SMG6-210ENST00000572205 SNRPA1P09661 255 aaKnown RBP11.45□□□□□ -0.58
SMG6-210ENST00000572205 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMG6-210ENST00000572205 PDIA6Q15084 440 aa11.45□□□□□ -0.58
SMG6-210ENST00000572205 BABAM1Q9NWV8 329 aa11.45□□□□□ -0.58
SMG6-210ENST00000572205 CD2APQ9Y5K6 639 aa11.45□□□□□ -0.58
SMG6-210ENST00000572205 ATP10DQ9P241 1426 aa11.44□□□□□ -0.58
SMG6-210ENST00000572205 STARD3NLO95772 234 aa11.44□□□□□ -0.58
SMG6-210ENST00000572205 CANXP27824 592 aaKnown RBP11.44□□□□□ -0.58
SMG6-210ENST00000572205 RFC4P35249 363 aa11.44□□□□□ -0.58
SMG6-210ENST00000572205 NFIXQ14938 502 aa11.44□□□□□ -0.58
SMG6-210ENST00000572205 TEX13AQ9BXU3 409 aaPredicted RBP11.44□□□□□ -0.58
SMG6-210ENST00000572205 CACNA1FO60840 1977 aa11.44□□□□□ -0.58
SMG6-210ENST00000572205 TIAM2Q8IVF5 1701 aa11.43□□□□□ -0.58
SMG6-210ENST00000572205 COL4A1P02462 1669 aa11.43□□□□□ -0.58
SMG6-210ENST00000572205 LMOD3Q0VAK6 560 aa11.43□□□□□ -0.58
SMG6-210ENST00000572205 PROSER3Q2NL68 480 aa11.43□□□□□ -0.58
SMG6-210ENST00000572205 NLGN1Q8N2Q7 840 aa11.43□□□□□ -0.58
SMG6-210ENST00000572205 MRS2Q9HD23 443 aa11.43□□□□□ -0.58
SMG6-210ENST00000572205 SLX4Q8IY92 1834 aa11.42□□□□□ -0.58
SMG6-210ENST00000572205 ANP32CO43423 234 aa11.42□□□□□ -0.58
SMG6-210ENST00000572205 KCNA3P22001 575 aa11.42□□□□□ -0.58
SMG6-210ENST00000572205 NEUROD2Q15784 382 aa11.42□□□□□ -0.58
SMG6-210ENST00000572205 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
SMG6-210ENST00000572205 TSPYL4Q9UJ04 414 aa11.42□□□□□ -0.58
SMG6-210ENST00000572205 CCDC88AQ3V6T2 1871 aa11.42□□□□□ -0.58
SMG6-210ENST00000572205 ADCY9O60503 1353 aa11.41□□□□□ -0.58
SMG6-210ENST00000572205 ERBB4Q15303 1308 aa11.41□□□□□ -0.58
SMG6-210ENST00000572205 ZNF521Q96K83 1311 aa11.41□□□□□ -0.58
SMG6-210ENST00000572205 LRRC37AA6NMS7 1700 aa11.41□□□□□ -0.58
SMG6-210ENST00000572205 DICER1Q9UPY3 1922 aaKnown RBP11.41□□□□□ -0.58
SMG6-210ENST00000572205 NEFMP07197 916 aa11.41□□□□□ -0.58
SMG6-210ENST00000572205 CCDC27Q2M243 656 aa11.41□□□□□ -0.58
SMG6-210ENST00000572205 TBC1D9BQ66K14 1250 aa11.41□□□□□ -0.58
SMG6-210ENST00000572205 SSUH2Q9Y2M2 353 aa11.41□□□□□ -0.58
SMG6-210ENST00000572205 RIC1Q4ADV7 1423 aa11.41□□□□□ -0.58
SMG6-210ENST00000572205 SNED1Q8TER0 1413 aa11.41□□□□□ -0.58
SMG6-210ENST00000572205 TBC1D2BQ9UPU7 963 aa11.4□□□□□ -0.58
SMG6-210ENST00000572205 ABCC12Q96J65 1359 aa11.4□□□□□ -0.59
SMG6-210ENST00000572205 UBN2Q6ZU65 1347 aa11.39□□□□□ -0.59
SMG6-210ENST00000572205 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
SMG6-210ENST00000572205 TAF1P21675 1872 aa11.39□□□□□ -0.59
SMG6-210ENST00000572205 HLFQ16534 295 aa11.39□□□□□ -0.59
SMG6-210ENST00000572205 TTLL7Q6ZT98 887 aa11.39□□□□□ -0.59
SMG6-210ENST00000572205 DZIP3Q86Y13 1208 aaKnown RBP11.39□□□□□ -0.59
SMG6-210ENST00000572205 WWC1Q8IX03 1113 aa11.39□□□□□ -0.59
SMG6-210ENST00000572205 MIER1Q8N108 512 aa11.39□□□□□ -0.59
SMG6-210ENST00000572205 IFT57Q9NWB7 429 aa11.39□□□□□ -0.59
SMG6-210ENST00000572205 IBTKQ9P2D0 1353 aaPredicted RBP11.39□□□□□ -0.59
SMG6-210ENST00000572205 LTBP1Q14766 1721 aa11.38□□□□□ -0.59
SMG6-210ENST00000572205 A0A087WZG4 1122 aa11.38□□□□□ -0.59
SMG6-210ENST00000572205 ANXA1P04083 346 aa11.38□□□□□ -0.59
SMG6-210ENST00000572205 HOXB7P09629 217 aa11.38□□□□□ -0.59
SMG6-210ENST00000572205 PRR5LQ6MZQ0 368 aa11.38□□□□□ -0.59
SMG6-210ENST00000572205 ZPR1O75312 459 aa11.37□□□□□ -0.59
SMG6-210ENST00000572205 DPEP1P16444 411 aa11.37□□□□□ -0.59
SMG6-210ENST00000572205 MYH3P11055 1940 aa11.37□□□□□ -0.59
SMG6-210ENST00000572205 MAP3K15Q6ZN16 1313 aa11.36□□□□□ -0.59
SMG6-210ENST00000572205 A0A1B0GUL6 1792 aa11.36□□□□□ -0.59
SMG6-210ENST00000572205 SERPINB2P05120 415 aa11.36□□□□□ -0.59
SMG6-210ENST00000572205 TGFB2P61812 414 aa11.36□□□□□ -0.59
SMG6-210ENST00000572205 CLEC4GQ6UXB4 293 aa11.36□□□□□ -0.59
SMG6-210ENST00000572205 C8orf58Q8NAV2 365 aa11.36□□□□□ -0.59
SMG6-210ENST00000572205 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
SMG6-210ENST00000572205 PARP3Q9Y6F1 533 aa11.36□□□□□ -0.59
SMG6-210ENST00000572205 IL16Q14005 1332 aa11.35□□□□□ -0.59
SMG6-210ENST00000572205 FANCIQ9NVI1 1328 aa11.35□□□□□ -0.59
SMG6-210ENST00000572205 A0A0G2JLW4 131 aa11.35□□□□□ -0.59
SMG6-210ENST00000572205 CHRNA5P30532 468 aa11.35□□□□□ -0.59
SMG6-210ENST00000572205 TSPYL6Q8N831 410 aa11.35□□□□□ -0.59
SMG6-210ENST00000572205 TSR2Q969E8 191 aaKnown RBP11.35□□□□□ -0.59
SMG6-210ENST00000572205 CHPF2Q9P2E5 772 aa11.35□□□□□ -0.59
SMG6-210ENST00000572205 ZNF330Q9Y3S2 320 aaPredicted RBP11.35□□□□□ -0.59
SMG6-210ENST00000572205 SPDYE2BA6NHP3 402 aa11.34□□□□□ -0.59
SMG6-210ENST00000572205 ERVV-1B6SEH8 477 aa11.34□□□□□ -0.59
SMG6-210ENST00000572205 SPDYE6P0CI01 402 aa11.34□□□□□ -0.59
SMG6-210ENST00000572205 MYL6BP14649 208 aa11.34□□□□□ -0.59
SMG6-210ENST00000572205 GNAI1P63096 354 aa11.34□□□□□ -0.59
SMG6-210ENST00000572205 C1QBPQ07021 282 aaKnown RBP11.34□□□□□ -0.59
SMG6-210ENST00000572205 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
SMG6-210ENST00000572205 DUSP27Q5VZP5 1158 aa11.34□□□□□ -0.59
SMG6-210ENST00000572205 DDX21Q9NR30 783 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMG6-210ENST00000572205 DUOX1Q9NRD9 1551 aa11.33□□□□□ -0.6
SMG6-210ENST00000572205 KLRG2A4D1S0 409 aaPredicted RBP11.33□□□□□ -0.6
SMG6-210ENST00000572205 NTSR2O95665 410 aa11.33□□□□□ -0.6
SMG6-210ENST00000572205 PRELPP51888 382 aa11.33□□□□□ -0.6
SMG6-210ENST00000572205 BICDL1Q6ZP65 573 aa11.33□□□□□ -0.6
SMG6-210ENST00000572205 ZNF34Q8IZ26 560 aa11.33□□□□□ -0.6
SMG6-210ENST00000572205 CCDC24Q8N4L8 307 aa11.33□□□□□ -0.6
SMG6-210ENST00000572205 WWC3Q9ULE0 1092 aa11.33□□□□□ -0.6
SMG6-210ENST00000572205 COL4A5P29400 1685 aa11.33□□□□□ -0.6
SMG6-210ENST00000572205 ZNF646O15015 1829 aaPredicted RBP11.32□□□□□ -0.6
SMG6-210ENST00000572205 SPEF2Q9C093 1822 aa11.32□□□□□ -0.6
SMG6-210ENST00000572205 HDGFL1Q5TGJ6 251 aa11.32□□□□□ -0.6
SMG6-210ENST00000572205 GIGYF2Q6Y7W6 1299 aaKnown RBP11.32□□□□□ -0.6
SMG6-210ENST00000572205 SLC51AQ86UW1 340 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms