RNA–Protein interactions for RNA: ENST00000570242.1

ITGAM-208, Transcript of integrin subunit alpha M, humanhuman

TSL 3

Gene ITGAM, Length 428 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-208ENST00000570242 CPSF1Q10570 1443 aaKnown RBP12.88□□□□□ -0.35
ITGAM-208ENST00000570242 C6orf229H3BNL8 230 aa12.88□□□□□ -0.35
ITGAM-208ENST00000570242 GCP02774 474 aa12.88□□□□□ -0.35
ITGAM-208ENST00000570242 GJA5P36382 358 aa12.88□□□□□ -0.35
ITGAM-208ENST00000570242 KRT27Q7Z3Y8 459 aa12.88□□□□□ -0.35
ITGAM-208ENST00000570242 CCDC125Q86Z20 511 aa12.88□□□□□ -0.35
ITGAM-208ENST00000570242 USB1Q9BQ65 265 aaKnown RBP12.88□□□□□ -0.35
ITGAM-208ENST00000570242 SPATA31A1Q5TZJ5 1347 aa12.88□□□□□ -0.35
ITGAM-208ENST00000570242 CD163L1Q9NR16 1453 aa12.87□□□□□ -0.35
ITGAM-208ENST00000570242 NLRP13Q86W25 1043 aa12.87□□□□□ -0.35
ITGAM-208ENST00000570242 FAM160A2Q8N612 972 aaPredicted RBP12.87□□□□□ -0.35
ITGAM-208ENST00000570242 STRN4Q9NRL3 753 aa12.87□□□□□ -0.35
ITGAM-208ENST00000570242 POLR3EQ9NVU0 708 aa12.87□□□□□ -0.35
ITGAM-208ENST00000570242 COL18A1P39060 1754 aa12.86□□□□□ -0.35
ITGAM-208ENST00000570242 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
ITGAM-208ENST00000570242 CLK2P49760 499 aaKnown RBP12.86□□□□□ -0.35
ITGAM-208ENST00000570242 MYT1Q01538 1121 aa12.86□□□□□ -0.35
ITGAM-208ENST00000570242 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
ITGAM-208ENST00000570242 LIMD1Q9UGP4 676 aa12.86□□□□□ -0.35
ITGAM-208ENST00000570242 MSS51Q4VC12 460 aa12.85□□□□□ -0.35
ITGAM-208ENST00000570242 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
ITGAM-208ENST00000570242 TTC21BQ7Z4L5 1316 aa12.85□□□□□ -0.35
ITGAM-208ENST00000570242 USP54Q70EL1 1684 aa12.84□□□□□ -0.35
ITGAM-208ENST00000570242 MTMR2Q13614 643 aa12.84□□□□□ -0.35
ITGAM-208ENST00000570242 SH3D19Q5HYK7 790 aa12.84□□□□□ -0.35
ITGAM-208ENST00000570242 LARP1Q6PKG0 1096 aaKnown RBP12.84□□□□□ -0.35
ITGAM-208ENST00000570242 DEFB132Q7Z7B7 95 aa12.84□□□□□ -0.35
ITGAM-208ENST00000570242 TNS1Q9HBL0 1735 aaKnown RBP12.84□□□□□ -0.35
ITGAM-208ENST00000570242 NFAT5O94916 1531 aa12.83□□□□□ -0.35
ITGAM-208ENST00000570242 KTN1Q86UP2 1357 aaKnown RBP12.83□□□□□ -0.36
ITGAM-208ENST00000570242 RGPD1P0DJD0 1748 aa12.83□□□□□ -0.36
ITGAM-208ENST00000570242 RNF223E7ERA6 249 aa12.83□□□□□ -0.36
ITGAM-208ENST00000570242 PPEF1O14829 653 aaPredicted RBP12.83□□□□□ -0.36
ITGAM-208ENST00000570242 SKIV2LQ15477 1246 aaKnown RBP12.83□□□□□ -0.36
ITGAM-208ENST00000570242 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
ITGAM-208ENST00000570242 RETREG3Q86VR2 466 aa12.83□□□□□ -0.36
ITGAM-208ENST00000570242 PRDM9Q9NQV7 894 aa12.83□□□□□ -0.36
ITGAM-208ENST00000570242 AATKQ6ZMQ8 1374 aa12.82□□□□□ -0.36
ITGAM-208ENST00000570242 ZBTB3Q9H5J0 574 aa12.82□□□□□ -0.36
ITGAM-208ENST00000570242 USP35Q9P2H5 1018 aa12.82□□□□□ -0.36
ITGAM-208ENST00000570242 TTC21AQ8NDW8 1320 aa12.82□□□□□ -0.36
ITGAM-208ENST00000570242 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
ITGAM-208ENST00000570242 EVA1CP58658 441 aa12.81□□□□□ -0.36
ITGAM-208ENST00000570242 TESK2Q96S53 571 aa12.81□□□□□ -0.36
ITGAM-208ENST00000570242 RGPD5Q99666 1765 aa12.81□□□□□ -0.36
ITGAM-208ENST00000570242 WNK3Q9BYP7 1800 aa12.81□□□□□ -0.36
ITGAM-208ENST00000570242 CRB1P82279 1406 aa12.8□□□□□ -0.36
ITGAM-208ENST00000570242 SPDYE5A6NIY4 337 aa12.8□□□□□ -0.36
ITGAM-208ENST00000570242 TUSC1Q2TAM9 212 aa12.8□□□□□ -0.36
ITGAM-208ENST00000570242 PRPF38BQ5VTL8 546 aaKnown RBP12.8□□□□□ -0.36
ITGAM-208ENST00000570242 ST20-MTHFSA0A0A6YYL1 179 aa12.79□□□□□ -0.36
ITGAM-208ENST00000570242 ZBTB7CA1YPR0 619 aa12.79□□□□□ -0.36
ITGAM-208ENST00000570242 TCP11L2Q8N4U5 519 aa12.79□□□□□ -0.36
ITGAM-208ENST00000570242 ANKLE1Q8NAG6 615 aa12.79□□□□□ -0.36
ITGAM-208ENST00000570242 SLC12A5Q9H2X9 1139 aa12.79□□□□□ -0.36
ITGAM-208ENST00000570242 LRRC37A3O60309 1634 aa12.79□□□□□ -0.36
ITGAM-208ENST00000570242 A0A1W2PP64 1363 aa12.79□□□□□ -0.36
ITGAM-208ENST00000570242 USP31Q70CQ4 1352 aa12.79□□□□□ -0.36
ITGAM-208ENST00000570242 DISP2A7MBM2 1401 aa12.79□□□□□ -0.36
ITGAM-208ENST00000570242 ABCC6O95255 1503 aa12.78□□□□□ -0.36
ITGAM-208ENST00000570242 SF3B2Q13435 895 aaKnown RBP12.78□□□□□ -0.36
ITGAM-208ENST00000570242 ARHGEF25Q86VW2 580 aa12.78□□□□□ -0.36
ITGAM-208ENST00000570242 PRR7Q8TB68 274 aa12.78□□□□□ -0.36
ITGAM-208ENST00000570242 NME9Q86XW9 330 aa12.77□□□□□ -0.37
ITGAM-208ENST00000570242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.77□□□□□ -0.37
ITGAM-208ENST00000570242 KCNH5Q8NCM2 988 aa12.77□□□□□ -0.37
ITGAM-208ENST00000570242 TMC1Q8TDI8 760 aa12.77□□□□□ -0.37
ITGAM-208ENST00000570242 PUS7Q96PZ0 661 aaKnown RBP12.77□□□□□ -0.37
ITGAM-208ENST00000570242 THRAP3Q9Y2W1 955 aaKnown RBP12.77□□□□□ -0.37
ITGAM-208ENST00000570242 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
ITGAM-208ENST00000570242 PEAK1Q9H792 1746 aa12.76□□□□□ -0.37
ITGAM-208ENST00000570242 LTN1O94822 1766 aa12.76□□□□□ -0.37
ITGAM-208ENST00000570242 RGS20O76081 388 aa12.76□□□□□ -0.37
ITGAM-208ENST00000570242 JUNDP17535 347 aa12.76□□□□□ -0.37
ITGAM-208ENST00000570242 MMP16P51512 607 aa12.76□□□□□ -0.37
ITGAM-208ENST00000570242 QPCTQ16769 361 aa12.76□□□□□ -0.37
ITGAM-208ENST00000570242 PROCA1Q8NCQ7 364 aaPredicted RBP12.76□□□□□ -0.37
ITGAM-208ENST00000570242 WDR17Q8IZU2 1322 aa12.76□□□□□ -0.37
ITGAM-208ENST00000570242 USP47Q96K76 1375 aa12.76□□□□□ -0.37
ITGAM-208ENST00000570242 OVOS2A0A0J9YW53 1432 aa12.76□□□□□ -0.37
ITGAM-208ENST00000570242 OVOS2Q6IE36 1432 aa12.76□□□□□ -0.37
ITGAM-208ENST00000570242 LILRB3O75022 631 aa12.75□□□□□ -0.37
ITGAM-208ENST00000570242 DXOO77932 396 aaKnown RBP12.75□□□□□ -0.37
ITGAM-208ENST00000570242 BAG6P46379 1132 aa12.75□□□□□ -0.37
ITGAM-208ENST00000570242 NINLQ9Y2I6 1382 aa12.75□□□□□ -0.37
ITGAM-208ENST00000570242 FCF1Q9Y324 198 aaKnown RBP12.75□□□□□ -0.37
ITGAM-208ENST00000570242 FAM196AQ6ZSG2 479 aa12.74□□□□□ -0.37
ITGAM-208ENST00000570242 HDGFL2Q7Z4V5 671 aaPredicted RBP12.74□□□□□ -0.37
ITGAM-208ENST00000570242 PCMTD1Q96MG8 357 aaPredicted RBP12.74□□□□□ -0.37
ITGAM-208ENST00000570242 GOPCQ9HD26 462 aa12.74□□□□□ -0.37
ITGAM-208ENST00000570242 TRIM37O94972 964 aa12.73□□□□□ -0.37
ITGAM-208ENST00000570242 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
ITGAM-208ENST00000570242 TOM1L2Q6ZVM7 507 aa12.73□□□□□ -0.37
ITGAM-208ENST00000570242 TERF2IPQ9NYB0 399 aa12.73□□□□□ -0.37
ITGAM-208ENST00000570242 RREB1Q92766 1687 aa12.73□□□□□ -0.37
ITGAM-208ENST00000570242 TSC1Q92574 1164 aa12.72□□□□□ -0.37
ITGAM-208ENST00000570242 PRKD2Q9BZL6 878 aa12.72□□□□□ -0.37
ITGAM-208ENST00000570242 SBF2Q86WG5 1849 aa12.72□□□□□ -0.37
ITGAM-208ENST00000570242 OVOS2A0A0G2JMS6 1433 aa12.71□□□□□ -0.37
ITGAM-208ENST00000570242 MYOM1P52179 1685 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms