RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 TRPM2O94759 1503 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 PTPRUQ92729 1446 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 PLEKHM2Q8IWE5 1019 aa9.13□□□□□ -0.95
UBFD1-209ENST00000569919 MYO5BQ9ULV0 1848 aa9.12□□□□□ -0.95
UBFD1-209ENST00000569919 SETBP1Q9Y6X0 1596 aa9.12□□□□□ -0.95
UBFD1-209ENST00000569919 GIGYF1O75420 1035 aaPredicted RBP9.12□□□□□ -0.95
UBFD1-209ENST00000569919 ATG7O95352 703 aa9.12□□□□□ -0.95
UBFD1-209ENST00000569919 CSB-PGBD3P0DP91 1061 aa9.12□□□□□ -0.95
UBFD1-209ENST00000569919 SF3B2Q13435 895 aaKnown RBP9.12□□□□□ -0.95
UBFD1-209ENST00000569919 PLPP7Q8NBV4 271 aa9.12□□□□□ -0.95
UBFD1-209ENST00000569919 SLC10A4Q96EP9 437 aa9.12□□□□□ -0.95
UBFD1-209ENST00000569919 C1QTNF2Q9BXJ5 285 aa9.12□□□□□ -0.95
UBFD1-209ENST00000569919 CROCC2H7BZ55 1655 aa9.12□□□□□ -0.95
UBFD1-209ENST00000569919 PTPN23Q9H3S7 1636 aa9.12□□□□□ -0.95
UBFD1-209ENST00000569919 SOS2Q07890 1332 aaPredicted RBP9.11□□□□□ -0.95
UBFD1-209ENST00000569919 GCC2Q8IWJ2 1684 aa9.11□□□□□ -0.95
UBFD1-209ENST00000569919 PDE4CQ08493 712 aa9.11□□□□□ -0.95
UBFD1-209ENST00000569919 NCOA4Q13772 614 aa9.11□□□□□ -0.95
UBFD1-209ENST00000569919 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
UBFD1-209ENST00000569919 NHSL1Q5SYE7 1610 aa9.11□□□□□ -0.95
UBFD1-209ENST00000569919 PTCH1Q13635 1447 aa9.11□□□□□ -0.95
UBFD1-209ENST00000569919 ANKRD50Q9ULJ7 1429 aa9.11□□□□□ -0.95
UBFD1-209ENST00000569919 SKOR1P84550 965 aa9.1□□□□□ -0.95
UBFD1-209ENST00000569919 MAP7D1Q3KQU3 841 aa9.1□□□□□ -0.95
UBFD1-209ENST00000569919 MKRN1Q9UHC7 482 aaKnown RBP9.1□□□□□ -0.95
UBFD1-209ENST00000569919 ATRNO75882 1429 aa9.1□□□□□ -0.95
UBFD1-209ENST00000569919 LZTS3O60299 673 aaPredicted RBP9.09□□□□□ -0.95
UBFD1-209ENST00000569919 RPIAP49247 311 aa9.09□□□□□ -0.95
UBFD1-209ENST00000569919 WNT7BP56706 349 aa9.09□□□□□ -0.95
UBFD1-209ENST00000569919 MMRN1Q13201 1228 aa9.09□□□□□ -0.95
UBFD1-209ENST00000569919 ZNF326Q5BKZ1 582 aaKnown RBP9.09□□□□□ -0.95
UBFD1-209ENST00000569919 TRMT44Q8IYL2 757 aaKnown RBP9.09□□□□□ -0.95
UBFD1-209ENST00000569919 CCDC85AQ96PX6 553 aaPredicted RBP9.09□□□□□ -0.95
UBFD1-209ENST00000569919 ORAI2Q96SN7 254 aa9.09□□□□□ -0.95
UBFD1-209ENST00000569919 C1orf167Q5SNV9 1468 aa9.08□□□□□ -0.96
UBFD1-209ENST00000569919 BLMP54132 1417 aaPredicted RBP9.08□□□□□ -0.96
UBFD1-209ENST00000569919 ADGRL3Q9HAR2 1447 aa9.08□□□□□ -0.96
UBFD1-209ENST00000569919 NBPF20Q3BBV1 942 aa9.08□□□□□ -0.96
UBFD1-209ENST00000569919 TRAF7Q6Q0C0 670 aa9.08□□□□□ -0.96
UBFD1-209ENST00000569919 USTQ9Y2C2 406 aa9.08□□□□□ -0.96
UBFD1-209ENST00000569919 METP08581 1390 aa9.08□□□□□ -0.96
UBFD1-209ENST00000569919 ADGRL2O95490 1459 aa9.08□□□□□ -0.96
UBFD1-209ENST00000569919 CARNS1A5YM72 827 aa9.07□□□□□ -0.96
UBFD1-209ENST00000569919 CD2BP2O95400 341 aaKnown RBP9.07□□□□□ -0.96
UBFD1-209ENST00000569919 VARSP26640 1264 aaKnown RBP9.07□□□□□ -0.96
UBFD1-209ENST00000569919 FAM50AQ14320 339 aaKnown RBP9.07□□□□□ -0.96
UBFD1-209ENST00000569919 EML3Q32P44 896 aa9.07□□□□□ -0.96
UBFD1-209ENST00000569919 RNF20Q5VTR2 975 aa9.07□□□□□ -0.96
UBFD1-209ENST00000569919 CDV3Q9UKY7 258 aaKnown RBP9.07□□□□□ -0.96
UBFD1-209ENST00000569919 DOLKQ9UPQ8 538 aa9.07□□□□□ -0.96
UBFD1-209ENST00000569919 SRCAPQ6ZRS2 3230 aa9.07□□□□□ -0.96
UBFD1-209ENST00000569919 BCL9LQ86UU0 1499 aa9.07□□□□□ -0.96
UBFD1-209ENST00000569919 ESPNB1AK53 854 aa9.06□□□□□ -0.96
UBFD1-209ENST00000569919 ATP5J2-PTCD1G3V325 749 aa9.06□□□□□ -0.96
UBFD1-209ENST00000569919 LIAT1Q6ZQX7 453 aa9.06□□□□□ -0.96
UBFD1-209ENST00000569919 DEFB132Q7Z7B7 95 aa9.06□□□□□ -0.96
UBFD1-209ENST00000569919 AEBP1Q8IUX7 1158 aa9.06□□□□□ -0.96
UBFD1-209ENST00000569919 UNC5CLQ8IV45 518 aa9.06□□□□□ -0.96
UBFD1-209ENST00000569919 UNC13BO14795 1591 aa9.06□□□□□ -0.96
UBFD1-209ENST00000569919 NPHP3Q7Z494 1330 aa9.05□□□□□ -0.96
UBFD1-209ENST00000569919 ZBTB7CA1YPR0 619 aa9.05□□□□□ -0.96
UBFD1-209ENST00000569919 RASA1P20936 1047 aa9.05□□□□□ -0.96
UBFD1-209ENST00000569919 ELOAQ14241 798 aaKnown RBP9.05□□□□□ -0.96
UBFD1-209ENST00000569919 CRTC2Q53ET0 693 aaPredicted RBP9.05□□□□□ -0.96
UBFD1-209ENST00000569919 KCTD17Q8N5Z5 321 aa9.05□□□□□ -0.96
UBFD1-209ENST00000569919 EHBP1Q8NDI1 1231 aa9.05□□□□□ -0.96
UBFD1-209ENST00000569919 PODXL2Q9NZ53 605 aa9.05□□□□□ -0.96
UBFD1-209ENST00000569919 XRN1Q8IZH2 1706 aaKnown RBP9.05□□□□□ -0.96
UBFD1-209ENST00000569919 LOC105371045A0A1W2PR82 267 aa9.04□□□□□ -0.96
UBFD1-209ENST00000569919 TMEM88BA6NKF7 163 aa9.04□□□□□ -0.96
UBFD1-209ENST00000569919 FAM196BA6NMK8 535 aa9.04□□□□□ -0.96
UBFD1-209ENST00000569919 OXLD1Q5BKU9 147 aa9.04□□□□□ -0.96
UBFD1-209ENST00000569919 ESCO1Q5FWF5 840 aa9.04□□□□□ -0.96
UBFD1-209ENST00000569919 RC3H1Q5TC82 1133 aaKnown RBP9.04□□□□□ -0.96
UBFD1-209ENST00000569919 LARP1Q6PKG0 1096 aaKnown RBP9.04□□□□□ -0.96
UBFD1-209ENST00000569919 SEPT12Q8IYM1 358 aa9.04□□□□□ -0.96
UBFD1-209ENST00000569919 EMID1Q96A84 441 aaPredicted RBP9.04□□□□□ -0.96
UBFD1-209ENST00000569919 KCTD15Q96SI1 283 aaPredicted RBP9.04□□□□□ -0.96
UBFD1-209ENST00000569919 CDCA7Q9BWT1 371 aaPredicted RBP9.04□□□□□ -0.96
UBFD1-209ENST00000569919 ZMIZ1Q9ULJ6 1067 aa9.04□□□□□ -0.96
UBFD1-209ENST00000569919 NOVA2Q9UNW9 492 aaKnown RBP9.04□□□□□ -0.96
UBFD1-209ENST00000569919 NOD1Q9Y239 953 aa9.04□□□□□ -0.96
UBFD1-209ENST00000569919 NUP155O75694 1391 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 LAMC1P11047 1609 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L15C9J2P7 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L10C9JJH3 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L13C9JLJ4 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L11C9JVI0 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L21D6R901 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L18D6R9N7 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L22D6RA61 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L17D6RBQ6 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L19D6RCP7 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L20D6RJB6 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 BAG6P46379 1132 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 RAB15P59190 212 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 USP17L24Q0WX57 530 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 PTK7Q13308 1070 aa9.03□□□□□ -0.96
UBFD1-209ENST00000569919 VASH1Q7L8A9 365 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms