RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 ZC3H4Q9UPT8 1303 aaKnown RBP29.64■■■□□ 2.34
RBFOX1-219ENST00000569895 RASSF7Q02833 373 aa29.63■■■□□ 2.33
RBFOX1-219ENST00000569895 STYK1Q6J9G0 422 aa29.63■■■□□ 2.33
RBFOX1-219ENST00000569895 TSPYL4Q9UJ04 414 aa29.63■■■□□ 2.33
RBFOX1-219ENST00000569895 C16orf71Q8IYS4 520 aaPredicted RBP29.62■■■□□ 2.33
RBFOX1-219ENST00000569895 MASTLQ96GX5 879 aa29.62■■■□□ 2.33
RBFOX1-219ENST00000569895 BABAM1Q9NWV8 329 aa29.62■■■□□ 2.33
RBFOX1-219ENST00000569895 DLG5Q8TDM6 1919 aa29.61■■■□□ 2.33
RBFOX1-219ENST00000569895 SRGNP10124 158 aa29.61■■■□□ 2.33
RBFOX1-219ENST00000569895 TMPOP42166 694 aaKnown RBP29.61■■■□□ 2.33
RBFOX1-219ENST00000569895 WDR43Q15061 677 aaKnown RBP eCLIP29.61■■■□□ 2.33
RBFOX1-219ENST00000569895 NGEFQ8N5V2 710 aa29.61■■■□□ 2.33
RBFOX1-219ENST00000569895 RRP7AQ9Y3A4 280 aaKnown RBP29.61■■■□□ 2.33
RBFOX1-219ENST00000569895 DLEC1Q9Y238 1755 aa29.6■■■□□ 2.33
RBFOX1-219ENST00000569895 ERVV-1B6SEH8 477 aa29.6■■■□□ 2.33
RBFOX1-219ENST00000569895 C21orf2O43822 256 aa29.6■■■□□ 2.33
RBFOX1-219ENST00000569895 BCORQ6W2J9 1755 aa29.59■■■□□ 2.33
RBFOX1-219ENST00000569895 GTF2E1P29083 439 aaPredicted RBP29.59■■■□□ 2.33
RBFOX1-219ENST00000569895 KIF6Q6ZMV9 814 aa29.59■■■□□ 2.33
RBFOX1-219ENST00000569895 HLFQ16534 295 aa29.58■■■□□ 2.33
RBFOX1-219ENST00000569895 SOGA3Q5TF21 947 aa29.58■■■□□ 2.33
RBFOX1-219ENST00000569895 ERBB4Q15303 1308 aa29.57■■■□□ 2.32
RBFOX1-219ENST00000569895 ZNF219Q9P2Y4 722 aaPredicted RBP29.57■■■□□ 2.32
RBFOX1-219ENST00000569895 NFKBIEO00221 500 aa29.56■■■□□ 2.32
RBFOX1-219ENST00000569895 MYL6BP14649 208 aa29.56■■■□□ 2.32
RBFOX1-219ENST00000569895 RUNDC1Q96C34 613 aa29.56■■■□□ 2.32
RBFOX1-219ENST00000569895 KDM3BQ7LBC6 1761 aa29.55■■■□□ 2.32
RBFOX1-219ENST00000569895 MAP3K15Q6ZN16 1313 aa29.55■■■□□ 2.32
RBFOX1-219ENST00000569895 FAM177BA6PVY3 158 aa29.55■■■□□ 2.32
RBFOX1-219ENST00000569895 NPR1P16066 1061 aa29.55■■■□□ 2.32
RBFOX1-219ENST00000569895 PRPF40BQ6NWY9 871 aaKnown RBP29.55■■■□□ 2.32
RBFOX1-219ENST00000569895 NYXQ9GZU5 481 aa29.55■■■□□ 2.32
RBFOX1-219ENST00000569895 RRAGCQ9HB90 399 aa29.55■■■□□ 2.32
RBFOX1-219ENST00000569895 ANKRD31Q8N7Z5 1873 aa29.55■■■□□ 2.32
RBFOX1-219ENST00000569895 NEUROD2Q15784 382 aa29.54■■■□□ 2.32
RBFOX1-219ENST00000569895 CCDC146Q8IYE0 955 aa29.54■■■□□ 2.32
RBFOX1-219ENST00000569895 RBM46Q8TBY0 533 aaKnown RBP29.54■■■□□ 2.32
RBFOX1-219ENST00000569895 KLRG2A4D1S0 409 aaPredicted RBP29.53■■■□□ 2.32
RBFOX1-219ENST00000569895 GLTPD2A6NH11 291 aa29.53■■■□□ 2.32
RBFOX1-219ENST00000569895 LAMB4A4D0S4 1761 aa29.53■■■□□ 2.32
RBFOX1-219ENST00000569895 SBF1O95248 1867 aa29.53■■■□□ 2.32
RBFOX1-219ENST00000569895 DPY19L2Q6NUT2 758 aa29.52■■■□□ 2.32
RBFOX1-219ENST00000569895 TAOK3Q9H2K8 898 aa29.52■■■□□ 2.32
RBFOX1-219ENST00000569895 EIF2S2P20042 333 aaKnown RBP29.51■■■□□ 2.31
RBFOX1-219ENST00000569895 APLP1P51693 650 aa29.51■■■□□ 2.31
RBFOX1-219ENST00000569895 PRELPP51888 382 aa29.51■■■□□ 2.31
RBFOX1-219ENST00000569895 TTLL7Q6ZT98 887 aa29.51■■■□□ 2.31
RBFOX1-219ENST00000569895 LTBP3Q9NS15 1303 aa29.5■■■□□ 2.31
RBFOX1-219ENST00000569895 ERFEQ4G0M1 354 aa29.5■■■□□ 2.31
RBFOX1-219ENST00000569895 PRKRIP1Q9H875 184 aaPredicted RBP29.5■■■□□ 2.31
RBFOX1-219ENST00000569895 ALDH1B1P30837 517 aa29.49■■■□□ 2.31
RBFOX1-219ENST00000569895 ZBTB3Q9H5J0 574 aa29.49■■■□□ 2.31
RBFOX1-219ENST00000569895 ADAMTS8Q9UP79 889 aa29.49■■■□□ 2.31
RBFOX1-219ENST00000569895 VEGFAP15692 232 aaPredicted RBP29.48■■■□□ 2.31
RBFOX1-219ENST00000569895 FSTL1Q12841 308 aa29.48■■■□□ 2.31
RBFOX1-219ENST00000569895 COL11A2P13942 1736 aaPredicted RBP29.46■■■□□ 2.31
RBFOX1-219ENST00000569895 CCDC93Q567U6 631 aa29.46■■■□□ 2.31
RBFOX1-219ENST00000569895 GIGYF2Q6Y7W6 1299 aaKnown RBP29.46■■■□□ 2.31
RBFOX1-219ENST00000569895 CHL1O00533 1208 aa29.45■■■□□ 2.31
RBFOX1-219ENST00000569895 LAS1LQ9Y4W2 734 aaKnown RBP29.45■■■□□ 2.31
RBFOX1-219ENST00000569895 GPTP24298 496 aa29.44■■■□□ 2.3
RBFOX1-219ENST00000569895 C7orf43Q8WVR3 580 aa29.44■■■□□ 2.3
RBFOX1-219ENST00000569895 PDIA6Q15084 440 aa29.43■■■□□ 2.3
RBFOX1-219ENST00000569895 PPP1R42Q7Z4L9 355 aa29.43■■■□□ 2.3
RBFOX1-219ENST00000569895 NUTM1Q86Y26 1132 aa29.43■■■□□ 2.3
RBFOX1-219ENST00000569895 ZNF34Q8IZ26 560 aa29.43■■■□□ 2.3
RBFOX1-219ENST00000569895 TRIM35Q9UPQ4 493 aa29.43■■■□□ 2.3
RBFOX1-219ENST00000569895 PARP10Q53GL7 1025 aa29.42■■■□□ 2.3
RBFOX1-219ENST00000569895 RTKN2Q8IZC4 609 aa29.42■■■□□ 2.3
RBFOX1-219ENST00000569895 SMC1BQ8NDV3 1235 aa29.42■■■□□ 2.3
RBFOX1-219ENST00000569895 IBTKQ9P2D0 1353 aaPredicted RBP29.41■■■□□ 2.3
RBFOX1-219ENST00000569895 SLX4Q8IY92 1834 aa29.41■■■□□ 2.3
RBFOX1-219ENST00000569895 SUSD4Q5VX71 490 aa29.41■■■□□ 2.3
RBFOX1-219ENST00000569895 TNRC6CQ9HCJ0 1690 aaKnown RBP29.4■■■□□ 2.3
RBFOX1-219ENST00000569895 CRY2Q49AN0 593 aa29.4■■■□□ 2.3
RBFOX1-219ENST00000569895 LRP10Q7Z4F1 713 aa29.4■■■□□ 2.3
RBFOX1-219ENST00000569895 RPGRQ92834 1020 aaKnown RBP29.39■■■□□ 2.3
RBFOX1-219ENST00000569895 UBN2Q6ZU65 1347 aa29.39■■■□□ 2.3
RBFOX1-219ENST00000569895 FER1L6Q2WGJ9 1857 aa29.38■■■□□ 2.29
RBFOX1-219ENST00000569895 ZEB1P37275 1124 aaPredicted RBP29.38■■■□□ 2.29
RBFOX1-219ENST00000569895 FKBP4Q02790 459 aaKnown RBP eCLIP29.38■■■□□ 2.29
RBFOX1-219ENST00000569895 HSP90AB3PQ58FF7 597 aa29.38■■■□□ 2.29
RBFOX1-219ENST00000569895 NECTIN2Q92692 538 aa29.38■■■□□ 2.29
RBFOX1-219ENST00000569895 PROSER3Q2NL68 480 aa29.37■■■□□ 2.29
RBFOX1-219ENST00000569895 COPS6Q7L5N1 327 aa29.37■■■□□ 2.29
RBFOX1-219ENST00000569895 DDX21Q9NR30 783 aaKnown RBP eCLIP29.37■■■□□ 2.29
RBFOX1-219ENST00000569895 ANXA1P04083 346 aa29.36■■■□□ 2.29
RBFOX1-219ENST00000569895 HOXB7P09629 217 aa29.36■■■□□ 2.29
RBFOX1-219ENST00000569895 CC2D2BQ6DHV5 1058 aa29.36■■■□□ 2.29
RBFOX1-219ENST00000569895 CFAP44Q96MT7 982 aa29.36■■■□□ 2.29
RBFOX1-219ENST00000569895 UTP14AQ9BVJ6 771 aaKnown RBP29.36■■■□□ 2.29
RBFOX1-219ENST00000569895 CEP350Q5VT06 3117 aa29.36■■■□□ 2.29
RBFOX1-219ENST00000569895 ABCC12Q96J65 1359 aa29.36■■■□□ 2.29
RBFOX1-219ENST00000569895 NUP98P52948 1817 aa29.36■■■□□ 2.29
RBFOX1-219ENST00000569895 ARFGEF2Q9Y6D5 1785 aa29.35■■■□□ 2.29
RBFOX1-219ENST00000569895 NTSR2O95665 410 aa29.35■■■□□ 2.29
RBFOX1-219ENST00000569895 HOXA10P31260 410 aaPredicted RBP29.35■■■□□ 2.29
RBFOX1-219ENST00000569895 AIMP1Q12904 312 aaKnown RBP29.35■■■□□ 2.29
RBFOX1-219ENST00000569895 RBM17Q96I25 401 aaKnown RBP29.35■■■□□ 2.29
RBFOX1-219ENST00000569895 CCDC88AQ3V6T2 1871 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms