RNA–Protein interactions for RNA: ENST00000569566.2

MSLN-208, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-208ENST00000569566 HSPA6P17066 643 aa24.41■■□□□ 1.5
MSLN-208ENST00000569566 EIF4A1P60842 406 aaKnown RBP24.41■■□□□ 1.5
MSLN-208ENST00000569566 DDX10Q13206 875 aaKnown RBP24.41■■□□□ 1.5
MSLN-208ENST00000569566 SETDB2Q96T68 719 aa24.41■■□□□ 1.5
MSLN-208ENST00000569566 ZC3H4Q9UPT8 1303 aaKnown RBP24.4■■□□□ 1.5
MSLN-208ENST00000569566 RGL2O15211 777 aa24.4■■□□□ 1.5
MSLN-208ENST00000569566 CLEC4GQ6UXB4 293 aa24.4■■□□□ 1.5
MSLN-208ENST00000569566 NPM2Q86SE8 214 aaKnown RBP24.4■■□□□ 1.5
MSLN-208ENST00000569566 PDE6BP35913 854 aa24.39■■□□□ 1.49
MSLN-208ENST00000569566 PNISRQ8TF01 805 aaKnown RBP24.39■■□□□ 1.49
MSLN-208ENST00000569566 ABCC12Q96J65 1359 aa24.39■■□□□ 1.49
MSLN-208ENST00000569566 PDZRN3Q9UPQ7 1066 aa24.38■■□□□ 1.49
MSLN-208ENST00000569566 ZNF652Q9Y2D9 606 aa24.38■■□□□ 1.49
MSLN-208ENST00000569566 ST5P78524 1137 aa24.37■■□□□ 1.49
MSLN-208ENST00000569566 RIC1Q4ADV7 1423 aa24.36■■□□□ 1.49
MSLN-208ENST00000569566 SRGNP10124 158 aa24.36■■□□□ 1.49
MSLN-208ENST00000569566 LMNB1P20700 586 aa24.36■■□□□ 1.49
MSLN-208ENST00000569566 HLFQ16534 295 aa24.36■■□□□ 1.49
MSLN-208ENST00000569566 ZNF622Q969S3 477 aaKnown RBP eCLIP24.36■■□□□ 1.49
MSLN-208ENST00000569566 SNED1Q8TER0 1413 aa24.35■■□□□ 1.49
MSLN-208ENST00000569566 DDX60Q8IY21 1712 aaKnown RBP24.35■■□□□ 1.49
MSLN-208ENST00000569566 PNNQ9H307 717 aaKnown RBP24.35■■□□□ 1.49
MSLN-208ENST00000569566 KDM2BQ8NHM5 1336 aa24.35■■□□□ 1.49
MSLN-208ENST00000569566 IBTKQ9P2D0 1353 aaPredicted RBP24.34■■□□□ 1.49
MSLN-208ENST00000569566 TOMM70O94826 608 aa24.34■■□□□ 1.49
MSLN-208ENST00000569566 STYK1Q6J9G0 422 aa24.34■■□□□ 1.49
MSLN-208ENST00000569566 PRPF40BQ6NWY9 871 aaKnown RBP24.34■■□□□ 1.49
MSLN-208ENST00000569566 NBPF5PQ86XG9 351 aaPredicted RBP24.34■■□□□ 1.49
MSLN-208ENST00000569566 NIP7Q9Y221 180 aaKnown RBP eCLIP24.34■■□□□ 1.49
MSLN-208ENST00000569566 LTBP3Q9NS15 1303 aa24.34■■□□□ 1.49
MSLN-208ENST00000569566 SCN4AP35499 1836 aa24.33■■□□□ 1.49
MSLN-208ENST00000569566 C21orf2O43822 256 aa24.33■■□□□ 1.49
MSLN-208ENST00000569566 TMPOP42166 694 aaKnown RBP24.33■■□□□ 1.49
MSLN-208ENST00000569566 MAP3K15Q6ZN16 1313 aa24.33■■□□□ 1.48
MSLN-208ENST00000569566 NPHP1O15259 732 aa24.32■■□□□ 1.48
MSLN-208ENST00000569566 TTLL7Q6ZT98 887 aa24.32■■□□□ 1.48
MSLN-208ENST00000569566 LRP10Q7Z4F1 713 aa24.32■■□□□ 1.48
MSLN-208ENST00000569566 TAF1P21675 1872 aa24.32■■□□□ 1.48
MSLN-208ENST00000569566 ERBB4Q15303 1308 aa24.32■■□□□ 1.48
MSLN-208ENST00000569566 UBN2Q6ZU65 1347 aa24.32■■□□□ 1.48
MSLN-208ENST00000569566 ZNF219Q9P2Y4 722 aaPredicted RBP24.31■■□□□ 1.48
MSLN-208ENST00000569566 TSPYL4Q9UJ04 414 aa24.31■■□□□ 1.48
MSLN-208ENST00000569566 KLRG2A4D1S0 409 aaPredicted RBP24.3■■□□□ 1.48
MSLN-208ENST00000569566 RIPK4P57078 832 aa24.3■■□□□ 1.48
MSLN-208ENST00000569566 CCDC146Q8IYE0 955 aa24.3■■□□□ 1.48
MSLN-208ENST00000569566 RBM46Q8TBY0 533 aaKnown RBP24.3■■□□□ 1.48
MSLN-208ENST00000569566 MASTLQ96GX5 879 aa24.3■■□□□ 1.48
MSLN-208ENST00000569566 CNKSR1Q969H4 720 aa24.29■■□□□ 1.48
MSLN-208ENST00000569566 RRP7AQ9Y3A4 280 aaKnown RBP24.29■■□□□ 1.48
MSLN-208ENST00000569566 ADAMTSL1Q8N6G6 1762 aa24.29■■□□□ 1.48
MSLN-208ENST00000569566 COL4A5P29400 1685 aa24.28■■□□□ 1.48
MSLN-208ENST00000569566 LRRC37AA6NMS7 1700 aa24.28■■□□□ 1.48
MSLN-208ENST00000569566 ERVV-1B6SEH8 477 aa24.28■■□□□ 1.48
MSLN-208ENST00000569566 MYL6BP14649 208 aa24.28■■□□□ 1.48
MSLN-208ENST00000569566 FAM177BA6PVY3 158 aa24.27■■□□□ 1.48
MSLN-208ENST00000569566 NGEFQ8N5V2 710 aa24.27■■□□□ 1.48
MSLN-208ENST00000569566 C7orf43Q8WVR3 580 aa24.27■■□□□ 1.48
MSLN-208ENST00000569566 GLTPD2A6NH11 291 aa24.26■■□□□ 1.47
MSLN-208ENST00000569566 LMOD3Q0VAK6 560 aa24.26■■□□□ 1.47
MSLN-208ENST00000569566 PDIA6Q15084 440 aa24.26■■□□□ 1.47
MSLN-208ENST00000569566 TAOK3Q9H2K8 898 aa24.26■■□□□ 1.47
MSLN-208ENST00000569566 ZBTB3Q9H5J0 574 aa24.26■■□□□ 1.47
MSLN-208ENST00000569566 PRKRIP1Q9H875 184 aaPredicted RBP24.26■■□□□ 1.47
MSLN-208ENST00000569566 RRAGCQ9HB90 399 aa24.26■■□□□ 1.47
MSLN-208ENST00000569566 NPR1P16066 1061 aa24.25■■□□□ 1.47
MSLN-208ENST00000569566 PROSER3Q2NL68 480 aa24.25■■□□□ 1.47
MSLN-208ENST00000569566 KIF6Q6ZMV9 814 aa24.25■■□□□ 1.47
MSLN-208ENST00000569566 TRIM35Q9UPQ4 493 aa24.25■■□□□ 1.47
MSLN-208ENST00000569566 CRY2Q49AN0 593 aa24.24■■□□□ 1.47
MSLN-208ENST00000569566 TPTE2Q6XPS3 522 aa24.24■■□□□ 1.47
MSLN-208ENST00000569566 NUTM1Q86Y26 1132 aa24.24■■□□□ 1.47
MSLN-208ENST00000569566 BABAM1Q9NWV8 329 aa24.24■■□□□ 1.47
MSLN-208ENST00000569566 KRT24Q2M2I5 525 aa24.23■■□□□ 1.47
MSLN-208ENST00000569566 RUNDC1Q96C34 613 aa24.23■■□□□ 1.47
MSLN-208ENST00000569566 NTSR2O95665 410 aa24.22■■□□□ 1.47
MSLN-208ENST00000569566 ANXA1P04083 346 aa24.22■■□□□ 1.47
MSLN-208ENST00000569566 GPTP24298 496 aa24.22■■□□□ 1.47
MSLN-208ENST00000569566 APLP1P51693 650 aa24.22■■□□□ 1.47
MSLN-208ENST00000569566 OLFM4Q6UX06 510 aa24.22■■□□□ 1.47
MSLN-208ENST00000569566 LTBP1Q14766 1721 aa24.21■■□□□ 1.47
MSLN-208ENST00000569566 POTECB2RU33 542 aa24.21■■□□□ 1.47
MSLN-208ENST00000569566 WDR43Q15061 677 aaKnown RBP eCLIP24.21■■□□□ 1.47
MSLN-208ENST00000569566 CCDC93Q567U6 631 aa24.21■■□□□ 1.47
MSLN-208ENST00000569566 SOGA3Q5TF21 947 aa24.21■■□□□ 1.47
MSLN-208ENST00000569566 GIGYF2Q6Y7W6 1299 aaKnown RBP24.21■■□□□ 1.47
MSLN-208ENST00000569566 C16orf71Q8IYS4 520 aaPredicted RBP24.21■■□□□ 1.47
MSLN-208ENST00000569566 FSTL1Q12841 308 aa24.2■■□□□ 1.46
MSLN-208ENST00000569566 NEUROD2Q15784 382 aa24.2■■□□□ 1.46
MSLN-208ENST00000569566 ERFEQ4G0M1 354 aa24.2■■□□□ 1.46
MSLN-208ENST00000569566 ZNF34Q8IZ26 560 aa24.2■■□□□ 1.46
MSLN-208ENST00000569566 NYXQ9GZU5 481 aa24.2■■□□□ 1.46
MSLN-208ENST00000569566 ADAMTS8Q9UP79 889 aa24.2■■□□□ 1.46
MSLN-208ENST00000569566 COL4A1P02462 1669 aa24.19■■□□□ 1.46
MSLN-208ENST00000569566 CHL1O00533 1208 aa24.19■■□□□ 1.46
MSLN-208ENST00000569566 SUSD4Q5VX71 490 aa24.19■■□□□ 1.46
MSLN-208ENST00000569566 SLC51AQ86UW1 340 aa24.19■■□□□ 1.46
MSLN-208ENST00000569566 EIF2S2P20042 333 aaKnown RBP24.18■■□□□ 1.46
MSLN-208ENST00000569566 DUOX1Q9NRD9 1551 aa24.16■■□□□ 1.46
MSLN-208ENST00000569566 VEGFAP15692 232 aaPredicted RBP24.16■■□□□ 1.46
MSLN-208ENST00000569566 FKBP4Q02790 459 aaKnown RBP eCLIP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms