RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 FANCIQ9NVI1 1328 aa16.17■□□□□ 0.18
NSMCE1-214ENST00000569236 ANXA1P04083 346 aa16.16■□□□□ 0.18
NSMCE1-214ENST00000569236 PROSER3Q2NL68 480 aa16.16■□□□□ 0.18
NSMCE1-214ENST00000569236 TBC1D9BQ66K14 1250 aa16.16■□□□□ 0.18
NSMCE1-214ENST00000569236 NLGN2Q8NFZ4 835 aa16.16■□□□□ 0.18
NSMCE1-214ENST00000569236 DDX21Q9NR30 783 aaKnown RBP eCLIP16.16■□□□□ 0.18
NSMCE1-214ENST00000569236 CHPF2Q9P2E5 772 aa16.16■□□□□ 0.18
NSMCE1-214ENST00000569236 DBF4Q9UBU7 674 aaPredicted RBP16.16■□□□□ 0.18
NSMCE1-214ENST00000569236 RGL2O15211 777 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 CHMP4AQ9BY43 222 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 KIF13BQ9NQT8 1826 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 C10orf71Q711Q0 1435 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 AFDNP55196 1824 aaKnown RBP16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 ERVV-1B6SEH8 477 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 GOLGA2Q08379 1002 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 TTLL7Q6ZT98 887 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 LRP10Q7Z4F1 713 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 SETDB2Q96T68 719 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 MAP3K15Q6ZN16 1313 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 ZNF521Q96K83 1311 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 CARMIL3Q8ND23 1372 aa16.15■□□□□ 0.18
NSMCE1-214ENST00000569236 SERPINB2P05120 415 aa16.14■□□□□ 0.17
NSMCE1-214ENST00000569236 TSPYL6Q8N831 410 aa16.14■□□□□ 0.17
NSMCE1-214ENST00000569236 ZBTB3Q9H5J0 574 aa16.14■□□□□ 0.17
NSMCE1-214ENST00000569236 NRXN2Q9P2S2 1712 aa16.13■□□□□ 0.17
NSMCE1-214ENST00000569236 NUP98P52948 1817 aa16.13■□□□□ 0.17
NSMCE1-214ENST00000569236 HLFQ16534 295 aa16.13■□□□□ 0.17
NSMCE1-214ENST00000569236 TWISTNBQ3B726 338 aaPredicted RBP16.13■□□□□ 0.17
NSMCE1-214ENST00000569236 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
NSMCE1-214ENST00000569236 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
NSMCE1-214ENST00000569236 GOLGB1Q14789 3259 aaKnown RBP16.13■□□□□ 0.17
NSMCE1-214ENST00000569236 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
NSMCE1-214ENST00000569236 HYPKQ9NX55 129 aa16.13■□□□□ 0.17
NSMCE1-214ENST00000569236 CCDC30Q5VVM6 783 aa16.12■□□□□ 0.17
NSMCE1-214ENST00000569236 XAGE3Q8WTP9 111 aa16.12■□□□□ 0.17
NSMCE1-214ENST00000569236 NIP7Q9Y221 180 aaKnown RBP eCLIP16.12■□□□□ 0.17
NSMCE1-214ENST00000569236 TGFB2P61812 414 aa16.11■□□□□ 0.17
NSMCE1-214ENST00000569236 NPHP1O15259 732 aa16.1■□□□□ 0.17
NSMCE1-214ENST00000569236 EXOSC9Q06265 439 aaKnown RBP16.1■□□□□ 0.17
NSMCE1-214ENST00000569236 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
NSMCE1-214ENST00000569236 ATP10DQ9P241 1426 aa16.1■□□□□ 0.17
NSMCE1-214ENST00000569236 GIGYF2Q6Y7W6 1299 aaKnown RBP16.1■□□□□ 0.17
NSMCE1-214ENST00000569236 CNBD1Q8NA66 436 aa16.1■□□□□ 0.17
NSMCE1-214ENST00000569236 UTRNP46939 3433 aa16.09■□□□□ 0.17
NSMCE1-214ENST00000569236 PXDNLA1KZ92 1463 aa16.09■□□□□ 0.17
NSMCE1-214ENST00000569236 N4BP2Q86UW6 1770 aaPredicted RBP16.09■□□□□ 0.17
NSMCE1-214ENST00000569236 KIAA1551Q9HCM1 1747 aa16.09■□□□□ 0.17
NSMCE1-214ENST00000569236 E9PSI1 815 aa16.09■□□□□ 0.17
NSMCE1-214ENST00000569236 NBPF5PQ86XG9 351 aaPredicted RBP16.09■□□□□ 0.17
NSMCE1-214ENST00000569236 STK31Q9BXU1 1019 aa16.09■□□□□ 0.17
NSMCE1-214ENST00000569236 GPR162Q16538 588 aa16.08■□□□□ 0.17
NSMCE1-214ENST00000569236 PRR5LQ6MZQ0 368 aa16.08■□□□□ 0.17
NSMCE1-214ENST00000569236 A0A0G2JLW4 131 aa16.08■□□□□ 0.16
NSMCE1-214ENST00000569236 TPTE2Q6XPS3 522 aa16.08■□□□□ 0.16
NSMCE1-214ENST00000569236 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
NSMCE1-214ENST00000569236 RNF123Q5XPI4 1314 aa16.07■□□□□ 0.16
NSMCE1-214ENST00000569236 VAMP4O75379 141 aa16.07■□□□□ 0.16
NSMCE1-214ENST00000569236 DPEP1P16444 411 aa16.07■□□□□ 0.16
NSMCE1-214ENST00000569236 GPTP24298 496 aa16.07■□□□□ 0.16
NSMCE1-214ENST00000569236 ST5P78524 1137 aa16.07■□□□□ 0.16
NSMCE1-214ENST00000569236 HSP90AB3PQ58FF7 597 aa16.07■□□□□ 0.16
NSMCE1-214ENST00000569236 PLBD2Q8NHP8 589 aa16.07■□□□□ 0.16
NSMCE1-214ENST00000569236 PHAXQ9H814 394 aaKnown RBP16.07■□□□□ 0.16
NSMCE1-214ENST00000569236 ANKRD36CQ5JPF3 1778 aa16.07■□□□□ 0.16
NSMCE1-214ENST00000569236 FAM177BA6PVY3 158 aa16.06■□□□□ 0.16
NSMCE1-214ENST00000569236 TCERG1O14776 1098 aaKnown RBP16.06■□□□□ 0.16
NSMCE1-214ENST00000569236 ZNF34Q8IZ26 560 aa16.06■□□□□ 0.16
NSMCE1-214ENST00000569236 CCDC24Q8N4L8 307 aa16.06■□□□□ 0.16
NSMCE1-214ENST00000569236 GTF2E1P29083 439 aaPredicted RBP16.05■□□□□ 0.16
NSMCE1-214ENST00000569236 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
NSMCE1-214ENST00000569236 BRIP1Q9BX63 1249 aa16.05■□□□□ 0.16
NSMCE1-214ENST00000569236 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
NSMCE1-214ENST00000569236 WWC3Q9ULE0 1092 aa16.05■□□□□ 0.16
NSMCE1-214ENST00000569236 ANKRD31Q8N7Z5 1873 aa16.05■□□□□ 0.16
NSMCE1-214ENST00000569236 UBN2Q6ZU65 1347 aa16.05■□□□□ 0.16
NSMCE1-214ENST00000569236 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
NSMCE1-214ENST00000569236 CHRNA5P30532 468 aa16.05■□□□□ 0.16
NSMCE1-214ENST00000569236 PDE6BP35913 854 aa16.05■□□□□ 0.16
NSMCE1-214ENST00000569236 CDCA7LQ96GN5 454 aa16.05■□□□□ 0.16
NSMCE1-214ENST00000569236 CACNA1FO60840 1977 aa16.04■□□□□ 0.16
NSMCE1-214ENST00000569236 ARFGEF2Q9Y6D5 1785 aa16.04■□□□□ 0.16
NSMCE1-214ENST00000569236 BRCA1P38398 1863 aaKnown RBP16.04■□□□□ 0.16
NSMCE1-214ENST00000569236 DDX58O95786 925 aaKnown RBP16.04■□□□□ 0.16
NSMCE1-214ENST00000569236 TCIRG1Q13488 830 aa16.04■□□□□ 0.16
NSMCE1-214ENST00000569236 PARP10Q53GL7 1025 aa16.04■□□□□ 0.16
NSMCE1-214ENST00000569236 RIC3Q7Z5B4 369 aa16.04■□□□□ 0.16
NSMCE1-214ENST00000569236 H0YIN7 160 aa16.03■□□□□ 0.16
NSMCE1-214ENST00000569236 YBX3P16989 372 aaKnown RBP eCLIP16.03■□□□□ 0.161e-10■□□□□ 10
NSMCE1-214ENST00000569236 KCNA3P22001 575 aa16.03■□□□□ 0.16
NSMCE1-214ENST00000569236 PPP1R42Q7Z4L9 355 aa16.03■□□□□ 0.16
NSMCE1-214ENST00000569236 C2CD5Q86YS7 1000 aa16.03■□□□□ 0.16
NSMCE1-214ENST00000569236 PIM2Q9P1W9 311 aa16.03■□□□□ 0.16
NSMCE1-214ENST00000569236 IBTKQ9P2D0 1353 aaPredicted RBP16.03■□□□□ 0.16
NSMCE1-214ENST00000569236 SUSD4Q5VX71 490 aa16.03■□□□□ 0.16
NSMCE1-214ENST00000569236 PDZRN3Q9UPQ7 1066 aa16.03■□□□□ 0.16
NSMCE1-214ENST00000569236 DLEC1Q9Y238 1755 aa16.02■□□□□ 0.16
NSMCE1-214ENST00000569236 GRIN3BO60391 1043 aa16.02■□□□□ 0.15
NSMCE1-214ENST00000569236 NUTM1Q86Y26 1132 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms